Culex pipiens pallens (northern house mosquito): 120414905
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Entry
120414905 CDS
T07310
Name
(RefSeq) uncharacterized protein LOC120414905 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120414905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120414905
03009 Ribosome biogenesis [BR:
cpii03009
]
120414905
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120414905
Spliceosome [BR:
cpii03041
]
Complex A
U1 snRNP components
U1 related factors
120414905
Complex B
120414905
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
Pre-60S particles
Helicases
120414905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120414905
NCBI-ProteinID:
XP_039432169
LinkDB
All DBs
Position
2:complement(146205853..146210869)
Genome browser
AA seq
945 aa
AA seq
DB search
MYDNEAVCTAAASGIVMQFQGNGQPHPGGYRPRTDKPDFYNGGAGGAGGPGGKPHYMNKP
GGGPPSIPPFNPNGFGGPKPMYGNGPNGANAGGAPGGGGFNKFRSNNFGGPGGVGMGGGM
IPKKDFGGPKLYGGPSFPGNGNPRFDKPMDSFGGPKKYNPMPNSYGGGMRNSYGPKPDYN
NLTKEDRAKVQSLKAKFPGQTLTKPMWENLEPFEKDFYVPHPSVMARSVDEVQLFRENMQ
VTVMGNTVPHPTQTFDEGNFPEFVINEINKQGFPSPTAIQAQGWPIALSGRDMVGIAQTG
SGKTLAYMLPAIVHIAHQKPLQRGDGPIVLVLAPTRELAQQIQTVVRDFGTHSKPNIRYT
CIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFE
PQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQINVGSLNLSANHNIHQIVDI
CEENEKEGKLLSLLKEIASDVNNKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSE
RDYVLQDFRHGKSTILVATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCSSFG
TAYTFFTPGNGRQARELLSVLEEAGQQPTPELISMAKSMPGGKGGRSRYNVRGALTSGGY
GRMDQGGFGGPRGGGGFQKKPFENRFGGPPGGMGGNRFGSGPNGPNKFGGAGGGYRGADS
WNKNGAGGYQQQQPYQAQNPQSGGQQQQLYEPHQQMRYQPKNMYQNQYEDFSNQMVGGAP
QAFNGHQGTRFYQGKPHQGQGGLQQTQPGGPGGRYQPNNQYGADPKSAGGRPPYQPKQQQ
YNNSYAAAGTAAAYPAQLAAAAAAAAAAVGGGQTIPAAGFATGFDPLAGVQGAMGTFASS
YQIPAAAAYYSYPAAAAPPPPPQTQTPQVVPPVQHVDATTGGAGY
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacaacgaggcagtatgcaccgccgcagcatcgggaatcgtgatgcaattccaa
ggcaacggccagccccaccccggcggataccggccccgcactgacaagccagacttttac
aatggcggagcgggcggtgccggtggccccggaggcaagccgcactacatgaacaagccc
ggcggtggccccccgtcgattccgcccttcaacccgaacggattcggaggacccaagccg
atgtacggcaacgggccgaacggagcgaacgccggaggggcgccgggtggcggcggattc
aacaagttccgcagcaacaactttggcggaccgggcggcgttggcatgggcggtggaatg
atcccgaagaaggactttggtggaccgaagctgtacggaggaccttcgttcccgggcaac
ggcaatccgcgcttcgataagccgatggattcgtttggcggtccgaagaagtacaacccg
atgccgaactcgtacggaggcggcatgcgtaacagttacggccccaagccggactacaac
aacctgacgaaggaggaccgcgccaaggtgcagtcgctgaaggccaagttccccggccag
acgctgacgaagcccatgtgggagaacctggaaccgttcgagaaggacttttacgtgccc
cacccgagcgtgatggcccgttccgtcgacgaggttcagctgttccgcgagaacatgcag
gtcaccgtcatgggcaacaccgtgccccaccccacgcagaccttcgacgagggcaacttc
cccgagttcgtcattaacgaaatcaacaagcagggcttcccctcgccgaccgccatccag
gcccagggctggcccattgcgctgtccggccgcgacatggtcggcatcgcccaaaccggc
tcgggtaaaaccctggcgtacatgcttcccgcaatcgtgcacatcgcacaccagaagcca
ctgcagcgcggcgatggtccgatcgtgctggtgctggccccaacccgcgagctcgcccag
cagattcagaccgtggtgcgtgactttggcacgcactcgaagccgaacatccgctacacg
tgcatctttggcggcgcgctgaagggaccgcaggttcgcgacttggagcgcggtgttgag
gtggtgattgcgacgcccgggcggttgatcgatttcctggagcgtggcatcacgaacctg
cgccgctgcacgtacctggtgctcgacgaggccgaccggatgctggacatgggcttcgag
ccgcagattcgcaagatcatcgagcagatccggccggatcggcaggtgctgatgtggagt
gcgacgtggccgaaggaggtgcaggcgttggcggaggactttttgcacgactacatccag
atcaacgtgggctcgctgaacctttcggcgaaccacaacatccaccagatcgtggacatt
tgcgaggagaacgagaaggagggcaagctgctgtcgctgctgaaggagatcgcgagcgac
gtcaacaacaagatcatcatctttgtcgagacgaagaagaaggtcgaggatctgctgaag
aacatcgtgcgggatgggtacggcgcgacgtcgatccacggtgacaagtcgcagtcggag
cgtgactacgtgctacaggacttccggcacggcaagagcaccattctggtggcgaccgac
gttgcggcgcgtggtttggacgtggaggatgtcaagtacgtgatcaactttgactacccg
aactcgtcggaggattacatccatcgtattggccgcacggggcgttgctcgtcgttcgga
acggcgtacacgttcttcacgcccggaaacggtcgtcaggcgcgcgagctgttgtcggtg
ctggaagaggccggacagcagcccacgccggagctgatcagcatggccaagtcgatgccc
ggaggaaagggaggtcgcagccggtacaacgtgcgtggtgcgttgacctcgggtggatac
ggtcgcatggaccagggtggattcggtggaccgcgaggaggtggtggcttccagaagaag
ccgttcgagaaccgcttcggaggaccgcccggaggcatgggaggaaaccggttcggcagt
ggcccgaacggaccgaacaagtttggaggcgccggaggtggctaccgcggagctgacagc
tggaacaagaacggcgccggaggctaccaacagcagcagccgtaccaagcccagaatccg
caatccggtggacagcaacagcagctgtacgaaccgcaccagcagatgcgttaccagccg
aagaacatgtaccagaaccagtacgaggacttctccaaccagatggtgggcggtgccccg
caggccttcaacggtcaccagggcacacgcttctaccagggtaagccgcaccagggccaa
ggtggtctgcagcaaacgcagccgggtggccccggaggtcggtaccagccgaacaaccag
tacggcgccgaccccaaatcagccggtggacgtcccccctaccaacccaagcagcagcag
tacaacaatagctacgctgcagcaggtacggccgcggcctacccggctcagcttgcggcg
gcggctgccgctgctgctgcggccgttggcggaggccagaccattccggcggccggattc
gccaccgggttcgatccgctggccggagtgcagggcgcgatgggcacgttcgcctcgtcg
taccaaatccctgccgcggcagcgtactactcgtacccggccgcagccgcccctccacca
cccccgcaaacccaaaccccgcaggtcgtgccaccggttcagcacgtcgacgcaacaacg
ggtggtgcagggtactaa
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