Culex pipiens pallens (northern house mosquito): 120414981
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Entry
120414981 CDS
T07310
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii04517
IgSF CAM signaling
cpii04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120414981
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120414981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpii04812
]
120414981
Cytoskeleton proteins [BR:
cpii04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120414981
Intermediate filaments
Intermediate filament-binding proteins
120414981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
120414981
NCBI-ProteinID:
XP_039432259
LinkDB
All DBs
Position
2:124788616..124859153
Genome browser
AA seq
2394 aa
AA seq
DB search
MTTDISVVRWDPSQGPGQEYIDEFEYDGGNSSSRLFERSRIKALAEERESVQKKTFTKWV
NSHLVRVNSRIGDLYVDMRDGKNLIKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLR
DQRVHLENIGSHDIVDGNASLNLGLIWTIILRFQIQDITIEETDNKETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLTKNNPIQNLNNAFNVAEEK
LGLTKLLDAEDVFVEHPDEKSIITYVVTYYHYFSKLKQETVQGKRIGKVVGIAMDNDRMI
NEYESLTSELLKWIEVTIVQLGDRQFANSLVGVQQQLAQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKSEHERELALREELIRQEKLEQLA
ARFNRKATMRETWLSENQRLVSTDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVVAV
CNELEAEKYHDIERIAARKENVLRLWNYLLELLRARRMRLEFSIQLQQNFQEMIYILDSM
EEIKQRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKQVVQNSQKFLGDEEGGYKP
CDPAIIVDRVQRLEDAYAELCKLAVERRSRLEESRKLWQFYWDMADEENWIKEKEQIVST
DEIGHDLTTVNLLLSKHKALEKEINSHEQQLMAVSTVGDELVRQGHFGADRIDERLKEIL
VMWNNLLDLNVSRRKRLENAVDYFQLFADADDIDNWMLDALRLVSSEDVGRDEANVQSLL
KKHKDVADELKNYAETIEQLHTQAQNLTLTEPEQQKVQERLAAIDARYKELMELAKLRKQ
RLLDALSLYKLISESDGVEQWIGEKERMLQTMVPGKDIEDVEIMKHRYDGFDKEMNANAS
RVAVVNQLARQLLHVEHPNSEEIIEKQNHLNQAWSKLREQAEGKRDDLKSAHGVQTFYIE
CRETISWIEDKKRILTETDSLQMDLTGVMTLQRRLSGMERDLAAIQAKLTALESEADAIE
GDHPEEAALIRERVAQIQVIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQAWLTKTQT
DVASEDTPTSLPEAEKLLNQHQSIREEIDNYTEDYTKMMEYGEGLTSEPTQTEDPQYMFL
RERLRALKDGWEELHQMWENRQVLLSQSLDQQLFNRDARQAEVLLSQQEHVLSKDDTPVN
LEQAENQLKRHEAFLTTMEANDEKINTIVQVSDQLAEKQHFDSDKIGKRAESIAHRRDDN
RNRAIELHEKLKNQVKLHEFLQDIEELTEWVQEKYITAQDDTYRSAKTVHSKWTRHQAFE
AEIAANKERLHEAQKAAQELMVEKPEFKEIIEPKLTDLAKNFDELETSTKEKGELLFDAK
REVIVQQSADDIDSWMDDLEKQIINTDTGNDLTSVNILMQKQQVIQTQMAVKARQVEELE
KQTEVLTKTAPQDVLEPIVEKKTAVNARFEKIKAPLLERQRQLEKKKEAFQFRRDVEEEK
LWIDEKMPLANSEENGNSLFNVHVLKKKHQSLNTEIDNHEPRIMTICNNGQKLIDEGHED
ASQFADLISQLTQKWQELKDSIDNRHKQLDQSEKVQQYFFDAAEAESWMSEQELYMMVED
RGKDEISAQNLMKKHETLEQSVEDYADTIRQLGETARQLTTEQHAYSDQVSVKQSQLDKL
YAGLKDLAGERRARLDEALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHITLLWER
FNEFAQDTAAVGSERVAKANGIADDLIHAGHSDSATIAEWKDGLNESWQDLLELIETRKA
MLAASRELHKFFHDCKDVLGRIIEKQHGVSDELGRDAGSVSTLQRKHQNFIQDLMTLHSQ
VQQIQEESSKLQAAYAGEKAREITNREHEVLAAWANLQGMCDARKNKLADTGDLFKFFNM
VRTLMLWMEDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNFSACLALGKELLA
RNHYASADIKERLLQLTNSRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPY
LMSTELGHTIDEVENLIKKHEAFEKSAAAQEERFSALERLTTFELKEMKRRQEAAEEAER
QRLQAEAEAKAAAEAEAEAARQAEAAARDQADAPGSPHSTKELESVHAETKPGREAKQIP
RPASSRTGTLPKYPSTGTDAPSTSTATTPRRHSGTPKERSASSASASASKVSRRSRSKSP
FRSFRWKRGTSKAEVSDDEGDRPSPGGTDEGAQEGILTRKHEWESTTKKASNRSWDKVYC
VARNGRLTFFKDQKSAKLVPEQTFRGEPPLELKGARIEIATDYTKKKHVFRIKLSNGAEF
LQQCHDDLEMNQWVTALKAQCELDASGEGRSLTLPASSQKDEQKRRSFFTLKKN
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtacggtgggatcctagtcagggtcccggccaggagtac
attgacgaattcgaatacgacggaggcaactccagttcacgccttttcgagcgatcacga
atcaaagctttagcggaggagcgtgaaagtgtccagaaaaagacgttcacaaaatgggtc
aactcgcacctggtgcgggtcaacagccgaataggcgacctgtacgtcgacatgcgggac
ggcaaaaacctcatcaaactgttggaagtattatccggcgagcgtttgccccgcccgacc
aagggcaagatgcgaattcactgcctcgagaacgtagataaggcgctgcagttcctacgc
gaccagcgggtccatctggagaacattggctcacacgacatcgtggacggcaacgcgagc
cttaacctcggtctcatctggaccatcatcctgcgattccagatccaagatatcaccatc
gaggagaccgacaacaaggagaccaagtccgccaaggatgcgctgctgctgtggtgtcag
atgaagaccgccggctaccacaacgtgaacgtgcgcaacttcacgacctcgtggcgggac
gggttggccttcaacgccatcatccacaagcatcgtccggatctgatccagttcgacaag
ctgaccaagaacaacccaatccagaacctgaacaacgcgttcaacgtggccgaggagaag
ctcggtctgacgaagctgctcgacgcggaggacgtgttcgtcgagcatccggacgaaaag
tccatcatcacctacgtcgtcacgtactatcactactttagcaagctgaagcaggagacg
gtgcagggcaagcgtatcggcaaggtggtcggcatcgcgatggacaacgaccgcatgatc
aacgagtacgaatcgctgacgagcgagctgctcaagtggatcgaagtgacgatcgtgcag
ctcggagaccgacagtttgccaactcgctggtcggcgttcagcagcagctggcgcagttc
tccaactaccgcaccgtcgagaaaccgcccaagtttgtcgagaagggaaacctcgaggtt
ctgctgttcacactccagtccaagatgcgggccaacaaccagaagccgtacacgccgaag
gagggcaagatgatttccgacatcaacaaggcgtgggaacgcctcgaaaaatccgaacac
gagcgtgaactcgccctccgcgaggaactcatccgccaggagaagctcgaacagcttgcc
gctcggttcaaccgcaaggctaccatgcgagagacatggctgtcggagaaccagcgtctg
gtcagcacggacaactttgggttcgatttggccgccgtggaagccgccgccaagaagcac
gaagccattgagaccgacatcttcgcgtacgaggaacgtgtccaggccgtggttgccgtt
tgcaacgagctcgaagctgaaaagtaccacgacattgagagaatcgccgctcgcaaggag
aacgtcctgcgcctgtggaactatctgctagaactgctacgagcccgacgaatgcgcttg
gagttctccatccagttgcagcaaaacttccaggagatgatctacattctggactcgatg
gaggagatcaagcagcgtctgctgaccgacgattacggcaagcatttgatgggtgtcgaa
gacctacttcagaagcactcgctggttgaggccgacatcaacgtgctgggcgaacgcgtc
aagcaggtcgtccagaactcgcagaaattcctcggagacgaagaaggaggctacaaaccg
tgcgatccggctatcatcgttgatcgcgtccagcgtctggaggatgcttacgccgaactg
tgcaaactggccgtcgagcgtcgttcccggctggaagagagccgcaagctgtggcagttc
tactgggacatggccgacgaggagaactggatcaaggagaaggaacagattgtttcaacc
gacgagattggtcacgacttgaccaccgtcaatctgctgctgtccaagcacaaggccctc
gagaaggagatcaactcgcacgagcagcaactgatggcggttagcaccgtcggtgacgag
ctggtccgccagggtcacttcggtgccgatcgcatcgacgagcgactcaaggaaatcctg
gtcatgtggaacaacctgcttgacctcaacgtttcccgccgtaagcgtttggagaacgcc
gtcgactacttccaactgtttgccgatgctgacgatatcgacaactggatgctggacgcg
ctgcgtctcgtgtcttccgaggacgttggccgtgacgaggctaacgtgcagagtctgctg
aagaagcacaaggacgttgccgatgagctgaagaattatgccgaaacaatcgaacagctg
cacacgcaagcccagaacctaaccctgaccgaaccggaacagcaaaaggtccaggaacgt
ctcgccgccatcgatgcccgctacaaggaactcatggaactggccaaactgcgcaagcag
cgtctgctcgatgcgctcagcttgtacaagctcatttccgagagcgacggcgtcgagcaa
tggatcggcgaaaaggaacgcatgctccaaaccatggttcctggcaaggacatcgaggat
gtggaaattatgaagcaccgatacgatggcttcgacaaggagatgaacgccaacgcgtcg
cgtgttgccgtcgtcaaccaacttgctcgccagctgctgcatgttgaacacccgaactcg
gaggaaatcatcgagaagcagaaccatctgaaccaggcctggtcgaagctgcgcgagcag
gctgagggcaaacgcgatgaccttaaatctgcccacggcgtgcagaccttctacattgag
tgccgcgagacaatctcctggatcgaggacaagaagcgaatcctcaccgaaaccgacagc
ctccagatggaccttacgggtgtcatgaccctgcagcgtcgtctgagcggaatggaacgc
gatctcgccgccatccaggccaagctgaccgctctggaaagcgaggccgatgccatcgag
ggtgatcatccggaagaagccgccctgatccgcgagcgtgttgcccaaatccaggtcatc
tgggaacagttgacgcagatgctgaaggaacgcgactcaaagctggaggaagccggcgat
ctgcaccgtttcctgcgcgatctggaccacttccaggcctggttgaccaagacacagacg
gatgtcgcttccgaggacacgccgacgtcgctgccggaggctgagaagctgctgaaccaa
caccagagcatccgcgaggaaattgacaactacaccgaggattacaccaagatgatggag
tacggcgagggactcacttcggagcccactcagaccgaagatccgcagtacatgttcctg
cgtgagcgtctccgtgctctgaaggacggctgggaggagctgcaccagatgtgggagaac
cgccaggtgctcctgtcgcaaagcctcgatcagcagctgttcaaccgcgatgcccgccag
gccgaggttctgcttagccagcaagaacacgttctcagcaaggacgatactccggttaac
ctggagcaggccgagaatcagctgaagcgtcacgaagcgttcctcaccacgatggaagcc
aacgacgaaaagatcaacacgatcgtccaggtgtcggatcagctggccgagaagcagcac
tttgactccgacaagattggaaagcgtgccgaaagtatcgctcatcgtcgtgacgacaac
cgcaaccgcgcgattgaactgcacgagaagctaaagaaccaggtcaagttgcacgagttc
ctgcaggacattgaagagctgaccgaatgggtccaggagaagtacattaccgcccaggat
gatacctaccgcagcgccaaaaccgtccacagcaaatggactcgccaccaggccttcgag
gccgaaattgccgccaacaaggagcgtctgcacgaagcccagaaggccgcccaagagctc
atggttgagaagccagagttcaaggaaatcatcgaacccaagttgacagatttggccaag
aactttgacgagctggagacgagcaccaaggagaagggagagctgctgttcgacgccaag
cgtgaagttatcgttcaacagagcgccgacgacattgactcctggatggacgaccttgag
aagcagatcatcaacacggacacgggtaatgatttgacctcggtgaacatcttgatgcag
aagcaacaggtcatccagacccagatggccgtcaaggcacgccaagtggaggaactggag
aagcagaccgaagtgctgaccaagaccgccccgcaggacgtgctggaaccgatcgtggag
aagaagacagccgtgaacgctcggtttgaaaagatcaaggcaccgctgcttgaacgccag
cgtcagttggagaagaagaaggaagccttccagttccgtcgtgacgtcgaggaagaaaag
ttgtggatcgacgagaagatgccgctggcaaactcggaggagaacggcaactcgctgttc
aacgtgcacgtgttgaagaagaagcaccagtcgctgaacaccgagatcgataaccacgag
ccgaggattatgacgatttgcaacaacggacagaagctgatcgacgaaggacacgaggat
gcttcccagtttgctgacttgatcagtcagttgacgcaaaagtggcaggagctgaaggac
tctatcgacaaccgtcacaagcagctggatcagtcggagaaggtgcagcagtacttcttc
gatgcggccgaagcggaatcgtggatgagcgaacaagagttgtacatgatggtggaggat
cgtggaaaggacgaaatttccgcccagaacttgatgaagaagcacgaaacgttggagcag
tctgttgaggactacgccgatactatccggcagttgggagaaactgcccgtcagttgact
acggaacagcatgcttacagcgatcaggtctcggtgaaacagtctcagctggacaaattg
tacgctggattgaaggacctcgcgggagaacgtcgtgcccgtctggatgaagctctgcag
ctgtttatgctgaaccgtgaagttgacgacctggagcaatggattgccgagcgtgagttg
gtcgctggatcgcacgagctgggccaggactacgaccacattacgctgctctgggaacgg
ttcaacgagtttgcccaggacacggctgccgtcggaagcgagcgtgtggccaaggccaac
ggcattgctgacgatctgattcacgccggacactcggacagtgcaacgatagcggaatgg
aaggacggattgaacgagtcgtggcaagacctgctggagctgattgaaaccaggaaggcg
atgctggctgcctcgcgcgaactgcacaaattcttccacgactgcaaggacgttctggga
cgcatcatcgagaagcagcatggagtctcggatgagctgggtcgcgatgccggatcggtg
tcgacacttcagcgtaaacaccagaactttatccaggaccttatgacgctccattcgcaa
gtgcaacagattcaggaagaatcatcgaagcttcaggccgcttacgccggcgagaaggct
cgggaaatcacgaaccgcgaacacgaagtgctcgccgcgtgggccaacctgcagggcatg
tgtgacgcacggaaaaacaaactcgccgacaccggagacctgttcaagttcttcaacatg
gttcgcacgctgatgctgtggatggaggacgtcgtccggcagatgaacacctcggagaag
ccacgcgacgtttccggcgtcgagctgctgatgaacaaccaccagagcttgaaggccgaa
atcgacacccgcgaggacaacttctccgcgtgtctcgccctcggtaaggaactgctcgcc
cggaatcactacgcttcggcagacattaaggaacgcctgctccagctgaccaacagcaga
aacgcgctgctgcaccggtgggaggaacgctgggagaatctgcaactgattctggaagtg
tatcagtttgcccgtgacgccgccgtcgccgaggcttggttgatcgcgcaggagccgtac
ctgatgtctacggagctcggccacacgatcgacgaggtcgagaacctgatcaagaagcac
gaggcgttcgagaagtccgccgcagcacaagaggaacgtttcagcgctttggagcgattg
acaacgtttgagctcaaagaaatgaaacgtcgccaggaggcagcggaagaggctgaacgt
cagcgtttgcaggcggaagcggaggcaaaggccgcggcggaagccgaagcagaggcggca
cggcaagcggaagcggccgcgcgagaccaggccgatgcgcccggatcgccacattccacg
aaggagctggaatcagtgcatgccgaaactaaaccgggtcgggaagcaaagcagattccg
agacctgcgagctcgcgaactggcacgctgcccaaatacccttccactggcaccgacgca
cccagcaccagcaccgccaccaccccgcggaggcactcgggcacgccgaaagagcgctcc
gccagcagcgccagtgccagcgcgtccaaagtcagccgaagatctcgctccaagagcccg
ttccggagtttccgctggaagcggggcacctccaaggccgaagtatccgacgacgaagga
gatcgtcccagccccggaggaaccgatgagggcgcccaggaaggtatcctcacccggaag
cacgagtgggagtctacgacgaagaaggcatcgaaccggtcatgggataaggtttactgc
gtggcccgtaacggtcgcctgacgttcttcaaggaccagaagtcggccaaactcgtcccg
gagcagacgttccgcggggaaccgccgctagagctgaagggagcgcgcatcgaaattgcc
actgactacaccaagaagaagcatgtgttcagaataaagctgtcgaacggcgccgaattc
ctgcagcagtgtcacgacgacctcgagatgaaccaatgggtaactgctttgaaagcccag
tgcgagcttgacgctagcggtgaaggccgttcgttaacgttgccagcctcatcacagaaa
gatgaacaaaagagacggtcattctttacactgaagaaaaattaa
DBGET
integrated database retrieval system
