Culex pipiens pallens (northern house mosquito): 120415199
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Entry
120415199 CDS
T07310
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120415199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120415199
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120415199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
120415199
NCBI-ProteinID:
XP_039432591
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All DBs
Position
2:complement(193640580..193642503)
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AA seq
299 aa
AA seq
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MATQQSPANLQAANSEKVFQWINELSNPETRETALLELSKKRESVPDLAPMLWHSFGTTA
ALLQEIINIYPSINPATLTAHQSNRVCNALALLQCVASHPETRSVFLAAHIPLFLYPFLH
TTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATF
ILQKILLDDSGLSYICHTYDRFSHVAIILGKMVISLSKEPSARLLKHVVRCYLRLSDNPR
AREALRQCLPDQLRDGTFAACLQEDKSTKPWLTLLLKNLETVSVPGADPRQVGISPLTS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggccacccagcagagccccgcgaacctgcaggcggccaacagcgagaaggtcttccag
tggatcaacgagctgtccaatccggagacgcgggagacggcgctgctggagctgagcaag
aagcgcgaatcggtgccggatttggccccgatgctgtggcacagcttcggcacgacggcc
gccctgctgcaggagatcatcaacatctatccgtcgataaatccggccacgctgacggca
caccagtcgaaccgggtttgcaacgcgctcgccctgctgcagtgcgtggcgtcccacccg
gagacgcggtccgtctttctggcggcgcacatcccgctgtttctgtacccgttcctgcac
acgacctcgaagacacgccccttcgagtacctgcggctgacctcgctcggcgtgatcgga
gcgctggtcaagaccgacgagcaggaggtgataacgttcctgctgacgacggagatcatc
ccgctgtgtttgcgcatcatggagtccggctcggagctgagcaaaaccgtcgcgacgttc
atcctgcagaagatcctactcgacgacagcggcctctcgtacatctgccacacgtacgac
cggttctcgcacgtggccattattctgggtaaaatggtcatctccctgtccaaggaacca
tccgcaagactgttgaagcacgtcgtccggtgctacctgcgactgtccgacaatccgaga
gcccgcgaggccctccgccagtgcctgccggaccagctgcgcgacggcacgttcgcggcc
tgcctccaggaggacaagtcgaccaaaccgtggctgacgctgctgctcaagaatctggag
acggtgagcgtgccgggggcggacccgcgacaggtcggcatctcgccgctgacgtcctaa
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