Culex pipiens pallens (northern house mosquito): 120415206
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Entry
120415206 CDS
T07310
Name
(RefSeq) chromodomain-helicase-DNA-binding protein Mi-2 homolog
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120415206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpii03036
]
120415206
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120415206
Chromatin remodeling factors
NuRD complex
120415206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
CHDNT
Helicase_C
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHDvar_NSD
PHD-1st_NSD
AAA_22
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
120415206
NCBI-ProteinID:
XP_039432595
LinkDB
All DBs
Position
2:complement(194063151..194084242)
Genome browser
AA seq
2032 aa
AA seq
DB search
MASDDEIDESLAEEETGQEDAEAKSPLDGEENSEDEALKSLAQAAQDEDDDYEPEDNRSK
KSKKGKKRKARGEEKSKARKKKKRKKNDSGEESDVRGSDEGGAGAGAGGDSDYEKPTKRS
GRDKKKGKDDKGKEEKKGGGGGGADYNMPSIEEVCSTFDLTDVKIEYSDEDYDNLTTYKA
FIAHVRPILGKENPKVPISKLMMLVAAKWREFSEENPNLQGEGGEEDKQDEEPPASPEYV
PKSSRSRNKTEKRDDDMIYDDEDDEDEEELERERSRKKGKKGGGSSAKKGKKPKVPTLKI
KFGKRKNASSEEDPDASGGSDRDSDAEFEKMLQQSEDKAEEEKERKSEAAVAAPEVDEDG
NPLPKKKAKTKIGKPGSRSKKKGKAKKSKFPDGDDGEHEHQDFCEVCQQGGEIILCDTCP
KAYHLVCLEPELEDTPEGKWSCPTCEADGGVAEDDDDEHQEFCRICKDGGELLCCDMCPS
AYHTFCLTPPLDDIPDGDWRCPRCSCPPLQYKVQKILTWRWTDKPIDPNEPGSSKGTGPR
RREYFVKFHEMSYWHCDWVTELQMDVYHPLMFRYYARKNDMEEPPKLEEALDEDDNRYKR
LMKMREGGDMDDTELEEKYYKYGVKPEWLNVHRVINHRTMRDGRTLYFVKWRELPYEAAT
WEEEDDEVPGLKNAIEYYMDLRANCSNEINSSSSSSSSKKSKKKGRKSRTKELEDEDRIG
PRRYTPPPEKPTTDLRRKYEVQPTYLDDTGMRLHPYQLEGINWLRYSWSNETDTILADEM
GLGKTIQTATFLYSLYKEGHCKGPFLVAVPLSTIINWEREFETWAPDFYCITYVGDKDSR
AIIREHELSFEEGAVRGGRASKIRANTIKFNVLLTSYEMVSLDAACLGSIDWSVLVVDEA
HRLKSNQSKFFKVLANYNIAYKLLLTGTPLQNNLEELFHLLNFLNKNKFNDLGVFQNEFA
DINKEDQVKKLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVDLSPMQKKYYKYILTRNFE
ALNPKGGGGACSLINIMMDLKKCCNHPYLFQAAVEEAPLGPGGNYEITALTKAAGKLVLL
EKMLKQLKETGHRVLIFSQMTKMLDIMEDFLEGIGYKYERIDGGITGTLRQEAIDRFNAP
GAQQFCFLLSTKAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFV
TRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEELFKEDGKDEE
AIHYDDKAVAELLDRSNKGVEEKENWSNDYLSSFKVASYTTKEDVEEEVDTEIIKQDAEN
SDPAYWVKLLRHHYEQQQEDMSRTLGKGKRVRKQVNYTDGGIVQTDAVKEDSTWQENLSD
GNSDYSGNSDDPGDEDDEDGDLNRRSKRRIERREAERDNRPLPPLLARVGGNIEVLGFNA
RQRKSFLNAIMRYGMPPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETF
ADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPELIKRPCEPVKNAAGGAAA
AASTSTAADAETPKSATTSTSATPATSAAPSPAPTPTAADKDDEATGGSSEDKKEGVVAD
EKKDEGVKKEDPEAGPSGEDKSEDVKKEEKSEDKEASAEVKSEVKKEGESSEEKKPEVSE
DSKEDVKTEKPKDEEVKKEEATAETAKVAKKEEADDDDVKITEEKKPVVEDKPIAIDDDD
DDVVIVKDDDEDVKKPAGKADPIEVHKRVFMFNIADGGFTELHTLWINEEKAAVPGREYE
IWHRRHDYWLLAGIVTHGYGRWQDIQNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFK
LLEQSLVIEEQLRRAAVLNLAQDAAHPAMALNARFAEVECLAESHQHLSKESLAGNKPAN
AVLHKVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSILSRLAATGNSVQPNP
PLAQFPAGFQGTSLPGFAAAAAAAANFANFRPTFSVPGQPTPSYPGGSGSSK
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacgacgaaatcgacgaatctctcgccgaggaggagaccggccaggaggac
gccgaggccaagtccccgctggacggcgaagaaaactccgaggacgaagcgctcaagagt
ctggcgcaggcggcgcaggacgaggacgacgactacgagccggaggacaaccgcagcaag
aagagcaagaagggcaagaagcgcaaagcccgcggcgaagagaagagcaaagcgcgcaag
aagaaaaagcgcaagaagaacgacagtggcgaggagagcgacgtcaggggaagtgatgag
ggaggggcgggtgcgggagcggggggtgattcggactatgaaaagccgacgaagcggagt
ggaagggacaagaagaaggggaaggatgataagggaaaggaggagaagaagggaggagga
ggaggtggggcggattataatatgccgtcgattgaggaggtttgcagtacgttcgatttg
acggatgtgaagatcgagtacagcgatgaggattatgacaacttgacgacgtacaaggcg
tttattgcgcacgtgcgaccgattctgggcaaggagaacccgaaggtgccgatctcgaag
ctgatgatgctggtggcggccaagtggcgcgagtttagcgaggagaacccgaacctgcag
ggtgagggtggcgaggaggacaagcaggacgaggaaccgccggcgtcgccggagtacgtg
cccaagtcgagtcgatcgcggaacaagacggagaagcgtgacgacgacatgatctacgac
gacgaggacgatgaggacgaggaagagttggagcgcgagcggagccggaagaagggcaag
aagggaggcgggtcgagcgcgaagaagggcaaaaagccgaaggttccgacgttgaagatc
aagtttggcaagcggaagaacgccagctcggaggaggatccggacgcgagtggcggctcg
gaccgggactcggacgcggagtttgagaagatgctgcagcagagtgaggacaaggccgaa
gaggagaaggagcgcaagagtgaggcggcggtggcggctccggaggtggacgaggacggg
aatccgctgccgaagaagaaggccaagaccaagattgggaagccgggtagtcgctccaag
aagaagggcaaagccaagaagagcaagttcccggacggggacgacggcgagcacgagcac
caggacttttgcgaggtgtgccagcagggcggcgagatcatcctgtgcgacacctgtccg
aaggcgtaccatctggtgtgtctggagccggagctggaggacacacccgagggcaagtgg
tcctgtccgacgtgcgaggcggacggtggcgtggcggaagacgacgacgacgagcaccag
gagttctgccggatctgcaaggacggcggggagttgctgtgctgcgacatgtgtccgtcg
gcgtaccatacgttctgtttgacgcccccgctggacgacattccggacggggactggagg
tgtccgcggtgcagctgtccaccgttgcagtacaaggtgcagaagattctgacctggcgc
tggacggacaaaccgattgacccgaacgagccggggtcgtcgaaggggacggggccgcgt
cgtcgcgagtactttgtcaagttccatgagatgtcgtactggcactgcgattgggttacg
gagctgcagatggacgtgtaccacccgttgatgttccggtactatgcgaggaagaacgac
atggaggaaccgcccaagttggaggaagctctggacgaggacgataaccggtacaagcgg
ttgatgaagatgcgcgaaggaggcgacatggacgacaccgagttggaggagaagtactac
aagtacggtgtcaagccggagtggctgaatgtgcaccgcgtgatcaaccaccggacgatg
cgcgacggtcgcacgttgtactttgtcaagtggcgtgaactgccgtacgaggcggccact
tgggaggaagaagatgacgaggttcctgggttgaagaacgccatcgagtactacatggat
ctgcgcgccaactgcagcaacgaaatcaactcgtccagcagcagcagcagcagcaagaag
agcaagaaaaagggccgcaagtctcgcaccaaggaactcgaagacgaagacaggattggg
ccacgtcggtacactccaccgccggagaagcccacaacggatctgcggcgcaagtacgag
gttcagccgacctacctggacgacaccggaatgagacttcacccctaccagctggaaggt
atcaactggttgcgttactcctggtccaacgagaccgacaccattctggccgacgaaatg
ggtctgggcaaaaccatccaaacggccaccttcctgtattcgctgtacaaggagggtcac
tgcaagggtccgttcctggtggcggtcccgctctccaccatcatcaactgggagcgagag
ttcgaaacctgggccccggacttttactgcatcacttacgtcggcgacaaggactcgcgt
gcgatcatccgcgagcacgagctttcgttcgaggagggcgccgtccgcggcggtcgtgcc
tccaagatccgcgccaacacgatcaagttcaacgtgctgctgacctcatacgaaatggtc
tcgctggacgccgcctgtctcggctcgatcgactggtccgtgctggtcgtcgacgaggcc
catcggctcaagtccaaccagagcaagttcttcaaggtgctcgccaactacaacatcgcg
tacaagcttctgctcacgggaacgccgctccagaacaacctggaggagctgttccatctg
ctgaactttttgaacaagaacaaattcaacgacctgggcgtgttccagaacgagtttgcc
gacatcaacaaggaggatcaggtcaaaaagctgcacgagatgttgggcccgcacatgctg
cgtcgtctgaaggcggacgtgctgaagaacatgcccaccaagtcggagtttatcgtgcgc
gtggatctgtccccgatgcagaagaagtactacaagtacatcctgacgcgtaactttgag
gcgctgaacccgaagggcggtggcggtgcctgctcgctgatcaacatcatgatggacctg
aagaagtgctgcaaccatccgtatctgttccaggccgcggtggaggaagctccgcttggg
ccgggggggaattatgaaattacggcgctgacgaaggccgctggcaagctggtgctgctg
gagaagatgttgaagcagctgaaggagacggggcatcgcgtgttgatcttctcgcagatg
accaagatgttggacattatggaggactttttggaggggattgggtacaagtacgagcgt
attgatggtggtattacgggaacgctgcgtcaggaggcgattgatcggttcaacgctccg
ggagcgcagcagttctgcttcctgttgtcgaccaaggccggaggtttgggtatcaacttg
gccaccgccgatacggtcatcatctacgactcggattggaatccgcacaacgatattcag
gcgttttcacgtgcccatcgtatcggtcaggccaacaaggtcatgatctaccggtttgtt
acgaggaactcggtcgaagagcgtgtcacgcaggtcgccaagcgtaagatgatgttgact
cacttggtggtacgacctgggatgggtggaaagggcgccaacttcaccaagcaagagttg
gacgatattctgcggttcggtacggaggagctgttcaaggaagacggcaaggacgaagaa
gccatccattacgatgacaaggccgtcgcagaactgctcgatcgctccaacaagggcgtt
gaggagaaggaaaactggtccaacgactatctgtcgtcgttcaaggtcgcctcgtacacc
accaaggaagacgtcgaggaggaggtggacacggagatcatcaaacaggacgcggaaaat
tccgaccccgcgtactgggtcaagctgcttcgccatcactacgaacagcagcaggaggac
atgtcccgaaccctcggcaagggcaagcgtgtccgcaagcaggtcaactacaccgacggt
ggcatcgtccagaccgacgccgtcaaggaagactcaacctggcaggagaacctctccgat
ggcaactcggactactccggcaattcggacgaccccggcgatgaggacgacgaggacggt
gatctgaaccgccgcagcaagcgtcgcatcgaacgtcgcgaagcggaacgcgacaaccgg
ccactcccaccgctgctagcacgcgtcggaggaaacatcgaagtgctcggtttcaacgct
cgccagcgcaagagcttcctgaacgcgatcatgcgctacggaatgcccccacaggacgcg
ttcaactcgcagtggctcgtgcgcgatctccgcggcaaatccgagcgtaacttcaaggcg
tacgtctcgctgttcatgcgacatctgtgcgaacccggcgcggacaacgcggaaaccttc
gccgatggcgtccctcgtgaaggtctcagccggcagcacgtcctcacccgaatcggcgtc
atgtcgctcatccgcaagaaggttcaagagtttgagcacatcaacggctactacagcatg
cccgagctgatcaagaggccgtgcgaaccggtcaagaacgctgcgggaggtgcggcggcg
gcagcgtccacttcaacggcggctgacgcagaaacgccgaaatcggccacgaccagcacg
agtgcgacgccggctaccagcgcggcaccaagtccggctccgacgccgactgcggcggat
aaggacgatgaagctaccgggggatcgtcggaggacaagaaggagggcgttgtcgccgat
gagaagaaggacgaaggagtcaagaaggaagatccggaggctggtccttctggtgaagac
aagtccgaggacgtcaagaaggaggagaagtcggaagataaggaggcttccgccgaggtc
aagtccgaagtcaagaaggagggagaatcgtctgaggagaagaagccggaagtgtcggaa
gattccaaggaggacgtcaagacggaaaagcccaaggacgaggaggttaagaaggaggag
gccaccgcggagaccgcgaaggtggccaagaaggaagaggctgacgatgacgatgtcaag
attaccgaggagaagaagccggtcgttgaagataagccgatcgcgatcgacgatgacgac
gatgacgtagttattgtgaaggacgatgacgaggacgtcaagaagcccgccggcaaagcc
gatcccatcgaagtccacaagcgagtcttcatgttcaacattgccgacggcgggttcacc
gagttgcacacgctctggatcaacgaggagaaggcggctgtccccggccgggagtacgaa
atctggcaccgccgacacgactactggctgctagcaggcatcgtgacgcacggttatggc
cgctggcaggacatccagaacgacatccgcttcgcgatcatcaacgaaccgttcaagatg
gacgtcggcaagggcaacttcctggaaatcaagaacaaattcctcgcccgccgcttcaaa
ctgctcgagcagtcgctggtcatcgaggagcagctgcgccgcgcagccgtcctcaacctg
gcccaggacgcggcccacccggcgatggcgctgaacgcgcgctttgccgaggtcgagtgc
ctggccgagtcgcaccagcacctgagcaaggaatctctggccgggaacaaaccggccaac
gccgtcctccacaaggtgctgaaccagctggaggagctgctgtcggacatgaagagcgac
gtgtcgcggctaccggccacgctggcccgcattccgcccgtggcccagcggctgcagatg
tccgagcggtcgattctgtcgcggttggcagctaccgggaactcggtgcaaccgaatccc
ccactcgcgcaattcccggccggcttccagggcacgtccctgcccgggttcgccgcggcc
gccgccgctgccgccaactttgccaacttccggcccacgttctcggtgcccggacagccc
acgcccagctaccccggcggttccggatcgtccaaataa
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integrated database retrieval system
