Culex pipiens pallens (northern house mosquito): 120415406
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Entry
120415406 CDS
T07310
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120415406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120415406
03036 Chromosome and associated proteins [BR:
cpii03036
]
120415406
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120415406
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120415406
Chromatin remodeling factors
BAF complex
120415406
PBAF complex
120415406
GBAF(ncBAF) complex
120415406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
ResIII
BRK
DEAD
HDA2-3
QLQ
DBINO
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
120415406
NCBI-ProteinID:
XP_039432867
LinkDB
All DBs
Position
2:complement(185320766..185355841)
Genome browser
AA seq
1648 aa
AA seq
DB search
MASPSPVNSPMPPPQAPSPMGPPSQSPAPSPSPHSPYQPPPPGPPQGPPHMAPGQGPPHP
HGPPGPPQGGQGGHMPMQGPPPPQHGGQPPNPHGPPQHMNGPPPGQGGPQGPPPPHHMQG
PPGGGPPGPPPQHMQQHPPGPPHPGQMGQHAGPPGQGPPGSQGPPPPHGPHQSGPPMPPG
MVPGGYPPHSMPPNTGPPPPGPMQPGGPGQGMAGPGGPNMGGPGGPNMMPGGPPPPPGQE
NLSALQRAIDSMEEKGLQEDPRYSQLLAIRATSKQQNLNVNQLHQLRGQIMAYRLLARHQ
PINKQLAAQIQAQRSDGTPPQCPTPPSSPFQGGPPGGPSPQPSMPQQQGPPQQGPPQGPP
QGPPGMPPGKIGPPEPGKPPAGGMPPNQSPMPGMTMGGPQQQHPPQMGGPGGPGQPQRPS
SQGPAGAGGVPRPAAQAPTVQPIQKQNRVTTVAKPVGLDPITILQERENRMAARIALRME
ELNNLPAIMPEDMRIQAQIELRALRVLNFQRQLRSEIVQCTRRDTTLETAVNVKAYKRTK
RQGLREARATEKLEKQQKLEAERKRRQKHQEFLALVLQHGKDFKEYHRNNVAKVGRLNKA
IMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGN
LTEMVKQHKVDQKKMKDDEDERKRRKKRMVLESGDIQHLDTDCEAHDCRVTVMETNSGKT
ITGDDAPYLRDLYGWLQVHPGWEYVISDGEDDDDEDESDEKRKDGDESTDKKTKEVIQKA
KVEDDEYKTEEQTYYSIAHTVHEKVTEQASILVNGKLKEYQIKGLEWLVSLFNNNLNGIL
ADEMGLGKTIQTIALVTYLMEKKKNNGPYLVIVPLSTLSNWVLEFEKWAPAVGVVAYKGS
PAGRRAVQNQMKATKFNVLLTTYEYVIKDKAVLAKLSWKYMIIDEGHRMKNHHCKLTQVL
NTHYNAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELN
EEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYKHMQSKGVL
LTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCDHIGGSGTTVSGPDLYR
ASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLGWRNFGYLRLDGTTKAEDRGD
LLKKFNCKNSEYFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRN
EVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDEMD
EEEENEVPDDEVINLMISRSDEELELFKKMDAERKAEEVKPRLLDESELPDWLVKEEEEV
DRWDYEEDNSILGRGSRQRKEVDYTDSLTEKEWLKAIDDGADFDEELEEEEREKKRKGRK
RKSRKEDSDDESVISTVTKRRKGTTHPRVKKQMKKVIDAVIKYTDEEGRVLSEPFMKLPS
KRELPDYYEVIKRPIDIKKILTRIDEAKYADFADLEKDFFQLCQNAQMYNEDTSLIYSDS
VEIQNVFTTSKQKVLEGAEEDDSDDDDDDDNSDEETSSVKMKLKIPKASTSSASSSLAAS
ASKPKGTPGRRKRPQKKYTISDDDDDMD
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccttcgccagtcaacagtccgatgccgccgccgcaggctccgagtccgatg
gggccaccatcgcagagtcccgccccttctccgtcgccgcacagtccgtaccagcctccg
ccgcccgggccaccgcaaggcccaccccatatggcacccggtcagggaccaccccatccg
cacggtcctccggggccgcctcagggtggacagggtggccacatgccgatgcaaggtcct
cctcccccgcagcacggtggtcaacctccaaacccccacggtccaccgcagcacatgaac
gggccacccccgggacagggaggacctcaggggccacctccgccacaccacatgcaagga
cctccgggaggtggaccaccagggccgccaccacagcacatgcagcaacatcccccgggt
cctccgcacccgggccagatgggacaacacgcgggaccacccggccaaggcccgcccggg
tcgcaaggccctccaccgccacacggaccccaccagagcggtccaccgatgccaccggga
atggtccccggcggatatccaccgcactcgatgccgccaaacacgggtccgccaccgcca
ggtccgatgcagccgggaggtcccggtcagggaatggccggtccaggaggccccaacatg
ggtggaccgggaggtccaaatatgatgcccggaggacctccgccaccgccaggtcaggaa
aatctgagtgctctccagcgagccattgattccatggaggagaagggactccaggaagat
ccacgctactcccaactgctggcgatccgcgccacctcgaagcagcagaacttgaacgtc
aaccagctgcaccaactccggggacagatcatggcctatcgactgctggcccgtcaccag
cccatcaacaagcagctggccgcgcaaattcaggctcaacgttcggacggaactccgccg
cagtgtccgacgccaccatccagccccttccagggtggacccccgggtggaccgtctcca
cagccgtcaatgccacaacagcagggaccaccgcagcaaggtccaccgcaaggccctccc
cagggtccgcccggaatgccaccgggcaagattggtcctccagaaccgggcaaacctccc
gccggcggaatgcctcccaaccagagtccgatgccgggcatgaccatgggaggtccccag
cagcaacatccgccccaaatgggaggccccggtggaccgggacagccacagcgtccaagc
tcgcaaggcccagccggtgccggaggcgttcctcgtccggcagcccaagcccccacagtt
cagccaatccagaagcagaaccgcgtcacgaccgtcgccaaaccggtcggcttggacccc
atcacgattctccaggagcgtgaaaaccgcatggccgctcgcattgccctgcgcatggaa
gaactcaacaacctgccggccatcatgccggaagatatgcgcatccaagcgcagattgaa
ctgcgcgcgcttcgcgtcctcaacttccagcgtcaactgcgctcggaaatcgttcagtgc
actcgccgagacaccacgctggagaccgccgtcaacgtgaaggcctacaagcgcaccaaa
cgtcaaggtctacgtgaagctcgtgccaccgagaagctcgagaagcagcagaagctggag
gccgagcgcaaacgtcgccagaagcaccaggagttcctcgcgctggtcctccagcacggc
aaggacttcaaggagtaccacaggaacaacgtcgccaaggtgggccggctcaacaaggcc
atcatgaactaccacgcaaacgccgaacgcgaacagaagaaagagcaggagcgcatcgag
aaggaacgtatgcggcggttgatggccgaggacgaggaaggttaccgcaagcttatcgat
cagaagaaagacaaacggttggcgttcctgctgtcgcaaacggacgagtacatcgggaac
ctcacggagatggtgaagcagcacaaggtcgaccagaagaagatgaaggacgacgaggac
gagcgcaagcggcgcaagaagcgcatggttctggagagcggagacattcagcacttggac
acggactgcgaggcgcacgactgtcgcgtgacggtgatggagaccaactcgggcaagacc
atcaccggggacgacgcgccgtatctgcgcgatctgtacggctggctgcaggtccacccg
ggctgggagtacgtcatttcggacggggaagatgatgatgacgaggacgagtcggatgag
aagcgcaaggacggggatgaatctacggacaagaagacgaaggaggttattcagaaggcg
aaggtggaggacgatgagtacaagacggaggagcagacgtactacagcattgcgcatacc
gtgcacgagaaggtcaccgagcaggcttcgatcttggtgaacggcaagctgaaggagtac
cagatcaaggggttggagtggctggtgtcgctgtttaacaacaatctaaacgggatcttg
gccgatgagatgggattgggaaagaccattcaaacgatcgccctggtcacctacctgatg
gagaagaagaagaacaacgggccgtatctggttatcgttccgctgtcgacattgtccaac
tgggtgctcgagtttgagaagtgggctccggccgtcggagtggtcgcgtacaagggttcc
cccgcaggtcggcgtgccgtccagaaccagatgaaggccaccaagttcaacgtgctgctg
accacgtacgagtacgtcatcaaggacaaagcggtgctggcgaagctgagctggaagtac
atgatcattgacgagggtcaccgcatgaagaaccatcactgcaagctgacgcaggtgctg
aacacgcactacaacgcgccccatcggctgctgttgacgggaacgccgctgcagaacaag
ctgcccgagttgtgggcgctgctgaactttttgctcccctcgatcttcaagtcgtgctcg
acgttcgagcagtggttcaacgcgccgttcgccaccaccggcgagaaggtcgagctgaac
gaggaggaaacgattctgatcatccggcgtctgcacaaggtgctgcgtccgttcttgctg
cgtcgtttgaagaaggaggtggagtcgcagctgccggataaggtcgagtacatcatcaag
tgcgacatgagcgggctgcagcgtgtgctgtacaagcacatgcagagcaagggcgtgctg
ctgacggacggatcggagaagggcaacaagggcaagggcggggcgaaggcgttgatgaac
acgatcgtgcaactgcgcaagctgtgcaaccatccgttcatgttccaggccatcgaggag
aagtactgcgatcatattggggggtccgggacgacggttagcggaccggatctgtaccgt
gcgtcgggcaagtttgagctgttggatcgaattctgcccaagttgaaggcgtccggccat
cgcgtgctgctcttctgtcagatgacgcagtgcatgaccatcatcgaggattacttgggc
tggcgcaactttggctacctccggttggacggtactaccaaggcggaagatcgtggcgat
ctgctgaagaagttcaactgcaagaactcggagtactttgtgtttctgctgtcgacgcgt
gccggaggtttgggtctgaatctgcaaactgccgacacggtcgtgatcttcgactcggat
tggaatcctcaccaggatttgcaggcccaggatcgtgcccatcgtatcggccagcggaac
gaggtgcgcgtgctgcgtctcatgacggtcaactcggtcgaggagcgtatcctggccgcg
gcccggtacaaactgaacatggacgaaaaggtcatccaggccggtatgttcgatcaaaag
tccacgggaagcgagcggcagcagttcttgcagagcattctgcaccaggacgaaatggac
gaggaagaggagaacgaagtcccggacgatgaggtgatcaacttgatgatttctcgaagc
gatgaagagttggagctgttcaagaagatggacgccgagcgcaaggccgaagaggtcaag
cctcgtctgctggacgaatccgagctacccgattggttggtcaaggaggaggaagaggtc
gatcgctgggactacgaagaggacaactcgattctcggccgcggctcgcgtcaacgcaag
gaggtcgactacacggacagcctaaccgagaaggaatggctcaaggccatcgacgacggc
gcggactttgacgaggagctcgaagaggaggaacgcgagaagaaacgcaaaggccgcaag
cgcaagagccgcaaggaagactcggacgacgagagtgtcatctcgacggtgaccaaacgc
cgcaagggaaccacccacccccgagtcaagaagcaaatgaagaaggtcatcgacgccgtc
atcaagtacaccgacgaggagggacgcgtgctctccgaacccttcatgaaactcccgtcc
aagcgcgaactgcccgattactacgaggtcatcaagcgacccatcgacatcaagaagatc
ctgacgcgcatcgacgaggccaagtacgcggactttgccgacctggaaaaagactttttc
cagctgtgccagaacgcgcagatgtacaacgaagacacgtccctaatttactccgacagc
gtcgaaatccagaacgtgtttaccacctccaagcaaaaggtgctcgagggagccgaagag
gacgattccgacgacgacgacgacgacgacaactcggacgaggagacgagcagcgtcaag
atgaagctgaagatcccgaaggcgagcacctcgtcggcgagctcgtcgctggcggcgtcc
gcgtccaagccgaagggcacgcccggacgcaggaagcgaccccagaagaagtacaccatc
tcggacgacgacgacgatatggattag
DBGET
integrated database retrieval system
