KEGG   Culex pipiens pallens (northern house mosquito): 120415464
Entry
120415464         CDS       T07310                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii04512  ECM-receptor interaction
cpii04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120415464
   04518 Integrin signaling
    120415464
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cpii00536]
    120415464
Glycosaminoglycan binding proteins [BR:cpii00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   120415464
SSDB
Motif
Pfam: Collagen COLFI VWC VWC2L_2nd VWC_Sas
Other DBs
NCBI-GeneID: 120415464
NCBI-ProteinID: XP_039432949
LinkDB
Position
2:complement(93783747..93791318)
AA seq 1563 aa
MKIRIRHTVLPLLLLAVILIDQIQCQEEDGAAPVKVSKKKSKKAKKKTVTVTKAVPRPPR
ERPQADAPPAYSDYENTYDQYDYGDGDDEGENGSRQTEASFRQPDNEIPVDAAPAPHITV
SVSPLEPESIVQPFTCHYEGKWYREQEQFQSGYQGCATCRCRNKQVVCDEADCPKIKADV
SVTVIPRTTTTTTTTTTTPVPEYDAAQLGNRLPLAPAGEPGTPGESGVPGSPGTPGVPGL
PGPPGPVPDLTYFTQQLQDSMAGSDKGPGPDNFQYMQAQVGPVGPRGPPGPSGVSGPQGF
QGTRGEPGEPGPPGVAGPGGPRGLPGPPGKDGAPGDDGEAGPQGIVGQPGPRGLPGLPGV
PGIKGHQGLPGLDGPKGEQGNSGEKGSVGSIGPIGAPGPVGPAGPRGERGREGPPGPNGL
RGIDGIAGPPGQPGPVGKAGPPGFPGTPGNKGDMGAQGPKGSQGPQGPRGESGRPGQPGE
PGLNGPPGKDGAAGEKGSSGSPGLAGPPGFPGPRGAPGLNGSPGDVGSKGEPGLPGDRGY
KGESGIKGESGTPGPRGLPGAAGPEGKRGKRGMKGPTGLAGPQGERGLPGIPGLPGPDGA
QGIKGQSGDRGAPGPQGTKGSTGDPGSPGQPGIQGLRGPAGRSGAQGKAGAPGERGPPGA
DGKVGEPGHQGLQGLPGPIGLPGDKGFTGEPGKDGDIGPPGPSGPRGDAGKDGPPGISGP
PGPPGNDGDRGPPGAAGPRGFQGLPGTPGNPGAPGKDGQTGQPGPSGPAGQPGIRGERGF
PGERGPIGTPGTPGLRGEAGAQGNDGPPGSPGPVGMKGHQGAPGIIGMPGLRGLPGPAGE
KGERGSLGPVGPEGPAGRTGERGPQGPVGPTGPPGEPAEKGEPGTPGISGEPGTPGAVGE
RGPVGPQGLQGFPGPQGPVGASGPKGDRGQMGLKGEQGNSGNPGTPGEPGPQGLIGLTGS
KGARGEAGLRGETGSMGAPGRPGDPGAAGQPGNSGPPGPAGIAGQKGNPGDTGRSGNPGP
PGIPGQPGPEGLKGQAGSDGPSGPAGNPGPQGAPGDRGMPGLPGPSGQQGARGLRGAAGE
PGQPGKPGHDGPQGVPGMSGPPGPPGPAGDQGIEGPVGKPGPPGIAGRVGDKGPIGSPGA
QGISGAPGLPGPPGPQGQIGQTGERGLRGETGSQGIDGPPGPRGKPGPPGLDGPKGDAGE
HGQKGVKGHRGLIGLQGLPGPAGNPGDKGDVGPAGQPGKPGEAGPRGPPGRDGSPGPQGM
LGMAGPRGPPGNDGKHGQSGLPGPPGPPGPPGDGVGYDAAALAALLGHGQVSNMKGPDPN
LGDEPMKFSKVFDLTEEERRQLVETAYERLKTAFGTFKKPDGKQASPAKTCRDLFAAYPE
YTSGHYWIDPNEGDVRDAILVYCDAQQKSSCVLPQPLRTKELHHVGDETEVWLGEMEAGM
KITYKADSNQIGFLQLLSASASQNVTYHCKNSVAFYNKEKNSYRQSLKLLAWNDAELTAR
GPQRLRYEATVDECQYRAPTYAQSILTYRTEKPTRLPIIDIAVRDVGELNQQFWIEIGAV
CFY
NT seq 4692 nt   +upstreamnt  +downstreamnt
atgaagattcgaatccggcacacggttctgccgttgctgctgctagctgtgatattgatc
gaccagatccagtgccaagaagaagatggcgcagctccggtgaaagtttcgaaaaagaaa
agcaaaaaagccaaaaagaagacagtcacggtgacgaaagccgtcccgaggccacccagg
gaacgaccacaagccgatgcaccgccggcctattccgactacgagaacacgtacgatcag
tacgattacggcgatggtgatgacgagggcgaaaatggatcccgccaaacggaggcctcg
ttccgccagccggacaacgagatccccgtcgatgccgctccggcgcctcacatcacggtc
agcgtgagtccgctcgagccggaatcgatcgtgcagccgttcacctgccattacgagggc
aaatggtaccgcgagcaggaacagttccaatcgggttaccagggctgtgccacgtgcagg
tgtcggaacaagcaggtcgtatgcgacgaagccgactgtccgaagatcaaagcggacgtc
agtgtgaccgttataccgcgaactacgaccacaacgactacgacgacgacgactccggtt
ccggagtatgatgccgcccagctgggcaatcgattgccgcttgcacctgccggagagccg
ggtactcccggtgaaagtggtgtgcctggttctcccggaactccgggtgttcctggattg
ccgggacctcctggccctgtaccggacctgacctacttcacgcaacagctgcaggactcg
atggctggatccgacaagggtcccggaccggataacttccagtacatgcaggcacaggtg
ggaccagttggtccacggggacctcccggcccttccggagtgtcggggcctcaaggtttt
cagggaacgagaggtgaacctggtgaacctggaccgcccggagttgcgggacccggtggt
cctcgtggtcttccggggcctcccggtaaggatggcgcacccggtgacgacggtgaagcc
ggtccacaaggtatcgtaggccaacctgggcctcggggcttaccgggcttgcccggcgtt
ccaggaatcaagggtcatcaaggattgcccggattggacggaccaaaaggagagcagggc
aacagcggtgaaaaaggttccgtaggttccattggaccaattggtgctccaggaccagtg
ggtcctgctggaccccgtggcgaacgaggacgagaaggtcctcccggaccgaatggactt
cgaggaatcgatggcatcgctggaccaccaggtcaacccggaccagtcggcaaagctgga
ccacccggatttccaggaaccccaggcaacaagggagatatgggtgcccaaggacccaag
ggtagccaaggtccgcagggaccccgtggtgaatcaggaagaccgggacaaccgggagaa
cctggtctgaacggtccaccaggaaaggatggcgctgccggtgagaaaggttccagcgga
tctcccggtttggctggcccacccggttttcctgggcctcgcggagctcctggcttgaac
ggtagtccaggtgatgtcggatcgaagggagagccgggtcttcccggagatcgaggatac
aagggagagtcgggtatcaagggagaatccggaactccggggccgcgaggcttacctgga
gctgccggtccagaaggaaaacgtggcaagcgtggtatgaagggacccactggattggct
gggccacagggagaacgtggtcttccgggaattcccggattgcccggtcctgatggagca
cagggtatcaaaggtcagagtggagatcggggagctccaggaccgcaaggaaccaagggt
tcaactggtgatccaggatctcctggacaacctggtatccaaggattgagaggacccgcc
ggccgttccggtgcacaaggtaaagcaggagcgccaggagagagaggcccacccggagcg
gatggcaaggtaggagaacccggtcaccaaggtctccaaggattacctggtcccattggt
ttgcctggagataaaggtttcacaggtgaaccaggcaaagatggagacattggaccgccg
ggaccttctggaccccgtggtgatgctggaaaagatggtccacctggcatttcaggacca
ccgggtccgcccggaaatgacggcgatcgtggaccacctggagccgctggaccacgtgga
ttccagggattgccaggaacgcctggaaacccaggagcgccaggaaaagacggtcaaact
ggacaaccgggtccgtcaggaccagcaggacaacccggaattcgtggcgaacgaggattc
cccggcgaacgtggtccaatcggaacaccgggaactccaggattacgtggggaggctggt
gctcagggcaatgatgggccaccgggttctccgggtccggttggcatgaaaggtcaccaa
ggtgcaccaggcattatcggtatgcctggtctgagaggacttcctggtccagccggcgaa
aagggagaacgtggttctcttggtccagttggacctgaaggacccgccggtagaacgggt
gaacgaggtccccaaggccctgtgggtccaactgggcctccgggagaacctgctgaaaag
ggagaaccaggaacgccaggaatttccggcgaacctggtactccgggagcagtcggcgaa
aggggtccagtgggaccgcaaggattacagggtttcccggggccgcaaggtccggtcgga
gcatcgggtcccaagggagatcgtggccaaatggggctgaagggcgaacaaggaaacagt
ggtaaccctggaacacccggagaacctggaccgcagggcttgattggattaaccggaagt
aagggagctcgaggcgaggctggcttacgtggcgaaactggctcgatgggcgctcctgga
agaccgggagacccgggtgcagcgggacaacccggaaactctggtccaccaggaccagct
ggaatagctggacagaaaggaaaccctggagatactggcagatctggcaacccaggacct
ccaggaataccgggacagcctggaccggaaggtttgaagggacaagctggcagtgatggg
ccatcaggaccagctggaaatcctggaccccagggcgccccaggtgatcgtggaatgcca
ggtctcccgggaccaagcggacagcagggtgcacgtggacttcgaggtgccgctggggaa
ccaggtcaaccgggaaaaccaggtcacgatggtccacagggtgtaccgggaatgtccgga
cctccgggacctccaggaccagctggtgatcaaggaattgagggaccggttggtaaacct
ggtccgccgggcattgctggacgtgtcggtgacaagggtccgattgggtcccctggtgca
cagggtatttcgggtgctcccggacttcccggtcctccagggccacaaggtcaaattggt
caaaccggtgaaaggggattacgcggtgaaacaggatcacagggtattgatggaccgcca
ggtccacgaggaaagccaggaccgcctggtttggatggccccaagggtgacgctggtgag
catggacagaagggtgtcaagggtcatcgaggtttgatcggtctgcaagggttaccggga
cctgcgggaaatcctggcgataagggtgatgttggtccggctggacagcccggtaaacct
ggtgaagctggtcctcgcggtcctcccggcagagatggttccccgggtccgcagggtatg
ctgggtatggcaggtccgcgaggtcctcccggaaacgatggcaagcatggacagagtgga
cttccaggtccccccggtcctcctggtcctccaggtgatggagtcggttatgacgcagct
gctttggcggcgctgcttggccacggacaagtaagcaatatgaagggtccggatccgaac
ctgggcgatgagccaatgaagttcagcaaggtgtttgaccttaccgaagaggagcgccga
caactggttgagacggcttacgaacgattgaagacggctttcggaacgttcaagaagcca
gacggtaagcaagcttcaccggccaagacctgcagagacttgttcgctgcctatccggag
tatacgtctggccattactggattgatcctaacgagggagatgtccgagatgccattctg
gtctattgtgatgcccaacagaagtcgtcatgcgtgcttccgcaaccactcaggaccaag
gagctgcaccacgtcggtgatgaaaccgaggtttggctaggagaaatggaagccggcatg
aagatcacgtacaaggccgacagtaaccagatcggattcctgcagcttctgtcggcatcg
gcatcgcagaacgtgacctaccactgcaagaacagcgtagcattctacaacaaggagaag
aacagctatcgccagagcttgaagctgctggcatggaacgacgccgaactgacggcccga
ggtccccaacggctgcggtacgaagccaccgtggacgagtgccagtaccgtgccccgacg
tacgctcaatcgatcctgacctaccggacggagaagcctacgaggttgccgatcatcgat
attgccgtgcgcgatgtcggcgagctaaaccaacagttttggatcgaaatcggggcggtt
tgtttctactaa

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