KEGG   Culex pipiens pallens (northern house mosquito): 120415486
Entry
120415486         CDS       T07310                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii04382  Cornified envelope formation
cpii04512  ECM-receptor interaction
cpii04518  Integrin signaling
cpii04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120415486
   04518 Integrin signaling
    120415486
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120415486
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120415486
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpii04147]
    120415486
   00536 Glycosaminoglycan binding proteins [BR:cpii00536]
    120415486
Exosome [BR:cpii04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   120415486
Glycosaminoglycan binding proteins [BR:cpii00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   120415486
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 120415486
NCBI-ProteinID: XP_039432987
LinkDB
Position
2
AA seq 1777 aa
MGTPVKWLITTTLLLWFGQHTTAQFWQDLTGGVGLFNRNDRDYARPPAQPYIDPSYNVID
TVSGAQGPPSRNCTSGTGCCTPKCFAEKGNRGFPGPPGLQGPKGMQGFTGAEGLPGSKGS
KGEPGPIGPLGVKGDRGREGLPGYPGVPGTNGLPGVAGAPGIPGVDGCNGTDGLPGLPGL
KGEPGPRGYPGIRGDKGEKGEGAREPENYNKGQKGEPGHDGAEGLQGRQGSPGERGSEGR
PGQPGIPGPGGPKGDKGIKGFCIKGIKGEKGEKGVEIGSVSGSETVTGPQGQKGDKGIDG
VPGISGEKGQAGERGPSGDRGLKGEKGLPGQPGPRGRDGNFGPVGLTGQKGDRGIEGLHG
LKGNPGPKGESGRDGSAGLQGIPGPPGPPGGGEGRPGAPGPKGPRGYPGPQGPKGMDGFP
GDPGPRGQVGPKGGQGIPGRPGPEGFPGDKGEKGEGGAIGLPGPQGPRGFPGAPGAEGLR
GDTGEPGVGIPGQKGNPGMAGFPGLKGQKGEAGFKGLMGAPGDAKEGRPGLPGRPGRDGE
KGESGRPGLPGLKGERGDKGEIGGRCSDCRPGMKGEKGERGYDGTPGRPGTPGPSGERGY
PGEMGIDGSPGLRGAPGQKGEPGLAGIPGADGERGESAIVDLNQIKPEKGERGERGEPGP
YGPKGDIGPRGPIGQPGQRGFTGPKGDKGRPGEPGIDGTPGASGRDGTPGKPGESIRGES
GAKGNPGYPGLKGDKGYAGLKGEAGVCASIPPNLEAAVKGPPGAQGEKGFTGPQGPQGDK
GDKGDRGLTGLGGIPGPQGLPGPVGPRGLPGPRGEKGNPGPMGFPGNPGKDGNSGIPGLP
GSKGSKGDPGLSMVGPPGPRGAQGLRGPKGDRGGPGDRGDVGQPGIVGYPGEKGDSGTPG
ISGLPGMVGPKGEPGPKGPAGLPGAPGRPGIDGVKGLMGLKGDVGAQGVIGWPGQKGDTG
PPGNDGMKGFQGRKGVQGLPGAAGLPGLQGPKGERGEKGDKGEFGLTGAPGLTGPPGPLG
MKGDKGLMGPPGLEGLPGFGGEKGDRGFTGAPGLPGEPGASSEKGQKGEPGAPGLRGVDG
RPGLNGMVGIKGEPGLPGYGRQGATGEKGDRGNPGLDGLAGLNGQKGDAGVTGFPGIKGD
KGISGLPGIPGSPGMDGAPGPEGAPGLAGLNGEKGSKGEAGRIGERGERGEKGDLGPPGP
PGYMGLKGDRGVPGERGTPATVEAIKGDKGESGFPGPVGLPGKPGLPGLVGDMGLQGPPG
AQGQPGFPGPPGLNGLQGMKGDIGLIGEKGEPCPVVKGEKGLPGRPGKNGRDGGPGPVGE
KGDKGLPGLAGPQGMPGLPGPLGRQGEKGDRGDSGIEGRPGKDGLPGPQGIKGERGFIGE
KGNAGPPGFPGPQGEKGDRGRDGRDGFNGPQGMKGDRGPQGLEGPPGLVGLSGEKGDKGL
RGPPGLDGVSGEKGQKGETPVLPPQRKGPPGPPGYDGQKGDKGLPGLQGPPGIPGAPGAP
GEVGLRGIEGARGLQGLRGEIGLEGRPGRDGFPGTPGPKGDPGAACTHAPDYLTGILLVK
HSQSEEIPQCEPGHTKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPILACGQNNV
CNYASRNDRTFWLSTSAPIPMMPVSEHEMRPYISRCTVCEATSNVIAVHSQSLAIPECPN
GWEGLWIGYSFLMHTAVGHGGGGQSLSAPGSCLEDFRATPFIECNGGKGHCHYYETQTSF
WLVSLEDHQQFERPQQQTLKAGNLLSRISRCQVCTRV
NT seq 5334 nt   +upstreamnt  +downstreamnt
atgggcacccccgttaaatggttaataacgaccacgcttcttttatggttcggacagcat
actacggcgcaattctggcaagatctcacgggcggcgtgggcttgttcaaccgaaacgat
cgagactacgcgcgaccaccggcacagccgtacatcgatcctagctacaatgtgatagac
acggtcagtggtgcccaagggccaccttcgcggaactgcacctcgggaaccggatgttgt
acgccaaagtgtttcgccgaaaagggcaaccgaggtttcccgggaccaccgggcttgcaa
ggccccaagggtatgcaaggattcaccggtgccgaaggtttgcccggaagcaagggctcc
aagggagaaccaggtccgattggaccgctcggagttaagggtgaccgaggtcgcgaaggt
ctgcccggatatccgggtgttcccggaaccaacggactacctggagtagccggtgcacca
ggtatccctggtgttgacggttgcaacggaacggatggacttcccggattgcctggtctc
aagggtgaacccggtcctcgaggttatcccggtattcgaggtgacaagggagaaaaaggt
gaaggtgctcgtgaaccggaaaactacaacaagggtcaaaagggtgaaccaggccacgat
ggtgctgaaggtctgcaagggcgacaaggatcaccgggtgagcgaggctccgaaggacga
ccaggacagcccggtattcctggacccggtggccccaaaggtgacaaaggtatcaagggc
ttctgcatcaagggtatcaagggtgaaaagggtgaaaaaggtgtcgaaattggatctgtc
agtggaagcgaaacggtaactggtccccaaggtcaaaagggcgacaaaggtatagatgga
gtgcccggcatttccggcgagaagggacaagctggagaacgtggaccgtctggcgatcgt
ggcttgaagggagaaaagggtcttccgggacaacctggtcctagaggtcgcgacggtaac
tttggtccagttggtttgacgggacagaagggtgaccgaggtatcgaaggattgcacgga
ttgaagggtaatccaggtcccaaaggtgaatctggaagagacggttcggctggattgcaa
ggtattcccggaccgccaggtcctccaggtggtggtgaaggacgtcccggtgctcctgga
ccaaaaggtccccgcggttatcctggtccgcaaggtcccaaaggtatggatggattcccg
ggtgatccaggaccacgtggtcaagtcggtcccaagggcggccaaggcattcctggacga
ccaggtccggaaggtttccccggtgataagggcgagaaaggagaaggtggtgctatagga
ttacctggaccgcaaggaccacgtggattccccggtgctcctggagcggaaggtctccga
ggagatactggtgagccgggagttggtattcctggtcagaagggtaaccccggtatggca
ggattccctggtttgaaaggacagaaaggtgaagctggtttcaagggattgatgggtgct
cctggtgacgcgaaggaaggtcgccctggtctgccaggtagaccgggtcgtgacggagaa
aagggcgagtcaggtcgaccaggtttgccaggactgaagggagaacgtggtgacaaggga
gagatcggaggccgttgttcggactgtaggccaggaatgaaaggcgagaagggagaacga
ggatacgatggaacacctgggcgcccgggtacacctggaccgtccggcgaacgtggttat
cctggagaaatgggtattgatggaagtcctggactgcgtggtgcacctggtcaaaaggga
gagcctggattagccggcatacctggtgctgatggtgagcgcggagaatcggccattgtc
gatctgaatcagatcaaaccggaaaagggcgaacgaggtgaacgtggtgaaccaggtccg
tatggtccgaagggagacatcggtcccagaggcccaattggtcaacccggtcagagaggc
ttcacaggtcccaagggagataagggaaggcccggagagccaggaatcgatggaacacct
ggtgcttcaggacgtgacggtactcccggaaagccgggagaatcaatccgaggagaaagt
ggtgctaagggcaacccaggttacccaggtttgaagggtgacaaaggatacgctggtctt
aaaggagaggcaggtgtttgtgcctctattccaccaaatctagaagctgccgttaagggt
cctcctggagcgcaaggcgaaaaaggttttactggtccgcagggtcctcagggcgataag
ggagacaagggagatcgtggtttgactggtcttggtggtattcctggtccgcagggtctt
cctggtccggttggtccgagaggtttaccaggccctcgcggtgaaaagggtaatcctgga
cctatgggcttccccggcaacccaggtaaggatggtaattctggtattcctggtctacct
ggatccaagggctctaagggtgatcctggattgtcaatggttggtccacctggtccgcga
ggtgctcaaggattgcgtggtcctaaaggtgatcgtggtggccctggtgatcgtggagac
gttggtcagcccggtattgtcggttatcctggcgagaaaggtgatagtggaactcctgga
atctctggtttacctggtatggttggtcctaagggagaacccggtccgaaaggtcccgct
ggtcttccgggagctcctggtcgtccaggtattgatggtgttaagggtttgatgggtttg
aagggagacgttggtgctcagggtgttattggttggccaggacagaaaggtgatacgggt
cctcccggtaacgatggtatgaaaggtttccagggtcgcaagggagttcaaggattacct
ggtgctgctggtcttccaggtttgcagggacctaagggcgaacgtggcgaaaagggcgat
aaaggagagttcggtttgactggagctccaggtttgacgggtccaccgggacctctcggt
atgaagggcgacaaaggattgatgggcccacctggtcttgaaggtttgcctggattcggc
ggcgagaagggagatcgcgggttcactggtgctccaggtcttcctggtgaacctggtgcg
tcttcggagaagggacaaaagggtgaacctggtgctcctggattacgcggagttgatgga
cgaccgggtctgaatggaatggttggaatcaagggtgaacctggcttgcctggatacgga
agacaaggtgctaccggcgaaaagggagatcgcggtaatcctggcttggatggtttggct
ggacttaacggacagaagggtgatgctggcgtcactggtttcccaggaattaagggcgat
aagggtatttctggtctgccgggtattcctggatctcctggtatggatggtgctccgggt
cctgaaggcgctcctggtctagctggattgaatggcgagaaaggttctaagggtgaggca
ggtcgtattggagagcgtggtgagcgaggagaaaagggtgatttgggtcctcctggtccg
cctggttatatgggactgaagggtgatcgaggtgttcctggagagcgtggcacaccggct
accgttgaggctatcaagggtgacaagggtgagtctggattcccgggtcctgttggactg
ccaggaaagcctggattgccaggtttggttggagatatgggtcttcagggtccacctggt
gcacaaggacagccaggtttcccaggaccaccagggctgaacggacttcagggcatgaag
ggtgatattggtttgataggagaaaagggtgaaccttgtccggttgttaagggtgagaag
ggtctgccgggacgtccaggcaagaatggtcgcgatggtggtccaggacctgttggggag
aagggagacaagggtttgcctggattggccggaccccaaggtatgcctggtttacctggt
ccgcttggaagacaaggagaaaagggcgatcgaggagattcgggtattgaaggtcgccca
ggaaaggatggtctgcctggtcctcagggaattaagggagagcgaggcttcattggtgag
aagggtaacgctggtccaccaggattccctggtccgcaaggtgagaagggagatcgtggt
cgggatggtcgcgatggattcaacggacctcaaggtatgaagggagatcgtggtccacaa
ggtttggaaggtcctccggggttggttggtttgtctggcgagaagggagacaagggactt
cgtggtcctcctggattagatggtgtttctggtgagaagggtcaaaagggtgaaactcca
gtgttgccaccacagcgtaagggtccgcccggtccacctggttacgatggtcagaaggga
gacaagggcttgcctggattgcagggaccacctggtattccgggagctcctggtgctcct
ggtgaggtcggtctgcgtggtatcgaaggtgctcgtggtcttcagggacttcgcggtgaa
attggtttggaaggtcgtcctggacgtgatggcttccctggaacgcctggtcctaaggga
gatccgggagcagcgtgtacgcatgcccctgactatcttaccggaattctgcttgtaaaa
cacagtcagtccgaagagattcctcagtgcgaaccgggccacaccaagctgtgggacggt
tactcgctgttgtatgtcgacggaaacgactacccgcacaaccaggatctgggttcggcc
ggttcttgtgtgcgcaagttctctacgctgccaattttggcttgtggccagaacaacgtc
tgcaattatgcctctcgaaacgaccgaactttctggttgtccacctcggcaccgatcccg
atgatgcccgtcagcgagcacgaaatgcgaccgtacatttcgcgctgtacggtgtgcgag
gccacgtccaacgtgatagccgtacacagccagtcgctagccattccggagtgtcccaac
ggctgggagggtctgtggatcggctacagtttcttaatgcacactgccgttggccacggt
ggcggtggccagtccctgtcggctccgggctcctgtctggaggacttccgggccacgccc
ttcatcgagtgtaacggtggcaagggccactgtcactactacgagacgcagacctcgttc
tggctcgtttcgctcgaggaccaccaacagttcgagcggccacaacagcagaccctcaag
gctggtaatttgctctcgagaatatcccgatgccaggtgtgcacccgcgtctag

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