Culex pipiens pallens (northern house mosquito): 120415774
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Entry
120415774 CDS
T07310
Name
(RefSeq) spectrin alpha chain isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120415774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpii04812
]
120415774
Cytoskeleton proteins [BR:
cpii04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120415774
Intermediate filaments
Intermediate filament-binding proteins
120415774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
SH3_9
EF-hand_6
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
Xpo1
Motif
Other DBs
NCBI-GeneID:
120415774
NCBI-ProteinID:
XP_039433324
LinkDB
All DBs
Position
3:37619274..37649983
Genome browser
AA seq
2438 aa
AA seq
DB search
MEQFTPKEVKILESAEDIQERREQVLSRYNEFKVETRHKREKLEDSRRFQYFKRDSDELE
SWIHEKLQAASEESYRDPTNLQAKIQKHQAFEAEVSAHSNAIVVLDNTGQEMINQQHFAS
ETIQRRLDELHRLWEMLLSRLAEKGMKLQQALVLVQFLRHCEEVMFWIKDKEAFVTADEF
GQDLEHVEVLQRKFDEFQKDMASQEYRVTEVNELADKLLSNGHPERDTITRKKEELNEAW
QRLKQLAILRQEKLFGAHEIQRFNRDADETVAWIAEKDVVLSSDDYGRDLASVQALQRKH
EGVERDLAALEDKVATLGAEAGRLCSIHADHSDQIREKQAEIAAYWQSLTAKAKERKQKL
DESYFLHRFLADFRDLVSWINGMKAIISADELAKDVAGAEALLERHQEHKGEIDARGDSF
KVTTEAGRQLLEREHYAAAEVQEKLAALESDKSSLLSLWEDRRILYEQCMDLQLFYRDTE
QADTWMAKQEAFLANEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDVFATKLIDGQ
HYAADDVAQRRSMLLARRSALMEKSSIRRQLLEDSSGLQQFERDCDETKGWISEKLKFAT
DDSYLDPTNLNGKVQKHTNFEHELTANKSRIEDITTNGQNLIEKNHYAADQINSRMQEIV
TLWESLVQASDKKGCKLQEASQQQQFNRTVEDIELWLSEVEGQLMSEDYGKDLTSVQNLQ
KKHALLEADVMAHQDRIEGIKVAANKFVESGHFDADNIRNKESALSKRYGALATPMAERK
QRMLDSLQVQQLFRDLEDEAAWIREKEPVAASTNRGRDLIGVQNLIKKHQAVLAEINNHE
NRAMGVISNGEQMLAEQSFATEDIKQRLDTLKDQWNSLKEKSTQRKQDLEDSLQAHQYFA
DANEAESWMREKEPLVSNQDYGKDEDSSEALLKKHEALVSDLEAFGNTIQALQEQAKNCR
QQETPVVDITGKECVMALYDYTEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVP
AAYIKKIDPGLSASQQNLVDGHSIAKRQSQINSQYDNLLALARERQNKLNETVKAYVLVR
EAADLSAWIKDKESHAQIKDVGEDLEEVEVMQKKFDDFNDDLKANEVRLAKLNEIAVQLT
SLGQTEAALKIKTQIQTLNEEWATLQNITQERASQLGSAHEVQRFHRDVDETKDWIAEKD
NALTNDDLGKDLRGVQTLQRKHEGLERDLAALRDKIRQLDETANRLMQSHPDTAEQTYAK
QKEINEEWQQVVGKAQQRKEKLLDSYDLQRFLSDYRDLMAWISSMMGLVTSEELANDVTG
AEALIERHQNHRAEIDFRYGIPQEHRTEVDARAGTFAAFEQFGAELLQANHYASPEIQEK
IENLSKSREELEQAWTARRLQLDQNLDLQLYLRDCEQAENWMSAREAFLNAEEVDSKGDN
VEALIKKHEDFDKAINGHEEKIGALQVLADQLIAQEHYAGKLIDDKRSEVLDRWRHLKED
LIEKRSRLGDEQTLQQFSRDADEIENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAEL
AANADRIQSVLAMGSNLIDKNQCSGSEDAVQKRLTQIADQWEYLTQKTTEKSLKLKEANK
QRTYIAAVKDLDFWLGEVESLLTSEDAGKDLASVQNLMKKHQLVEADIHAHEDRIKDMNA
QADSLVESGQFDSAGIQEKRQSINERYERICNLAAHRQARLNEANTLHQFFRDIADEESW
IKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHEPAIQAVQEAGEKLMDVSNLGVP
EIEQRLKALNQAWAELKGLAATRGQKLDESLIYQQFLAKVEEEEAWITEKQQLLSVEDYG
DSMAAVQGLLKKHDAFETDFAAHRDRCSDIRDNGQTLVTNNNHHGESISQRCAQLDKKLE
NLQALATRRKNALLDNFAYLQFMWKADVVESWIADKENHVKSEEFGRDLSTVQTLLTKQE
TFDAGLSAFEQEGIHNITALKDQLISASHAQSAAILKRHEDVLTRWQKLRTDSEARKYRL
LGMQEQFRQIEDLYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEITALRAAHAQFQAS
LSSAQYDFQALADLDRKIKSFNVGPNPYTWFTMEALEDTWRNLQKIIEERDAELAKEVHR
QEENDKLRKEFAKHANLFHQWLTETRYAILGWDINGTSLMDGSGTLEEQFEALCHKANEI
RARRGDLKKIEELGATLEEHLILDNRYTEHSTVGLAQQWDQLDQLAMRMQHNLKQQIQAR
NQSGVSEDSLKEFSMMFKHFDKDKSGKLNHQEFKSCLRALGYDLPMVEEGQPDPEFEEIL
NVVDPNRDGQVSLQEYIAFMISKETENVQSYEEIENAFRAITASDRPYVTKDELYSNLTK
DMADYCVQRMKPFNDPKTGHPVTGALDYVEFTRTLFQN
NT seq
7317 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtttacccccaaggaggtaaagatcctcgagagtgccgaggacatccaggag
cgccgtgagcaggtgctcagccggtacaatgagttcaaggtggagacgcgccacaagcgc
gagaagctggaggactcgcgtcgcttccagtactttaagcgcgactcggacgagctggag
agctggatccacgagaagctgcaggccgcgtcggaggagagctaccgcgatccgaccaat
ctgcaggccaagatccagaagcatcaggcgttcgaggcggaagtttcggcccatagcaat
gcgatcgtcgtgttggacaacaccggccaggagatgattaaccagcagcactttgcttcg
gagacgatccagcgtcggctggatgagttgcaccgtctgtgggagatgctgctgtcgcgg
ctggccgaaaagggcatgaagctgcagcaggctctggtgttggtgcagttcttgcgccac
tgcgaggaggtcatgttctggatcaaggacaaggaggcgttcgttacggccgacgagttt
ggccaggatctcgagcacgtcgaggtgttgcagcgcaagtttgacgagttccagaaggac
atggcctcgcaggagtaccgtgtgacggaggtcaacgagctcgctgataagctgctgtcc
aacggacatccggaacgcgacaccattacgcgcaagaaggaggagctgaacgaagcctgg
cagcgtctgaagcagctggccattctgcgccaggagaagctgtttggagcgcacgagatc
caacgtttcaaccgtgatgcggacgaaaccgttgcgtggattgccgagaaggacgtcgtt
ctgtcgtcggacgattacggccgtgacttggccagcgtgcaggctctgcagcgcaagcac
gagggcgtcgagcgtgatttggccgcgctggaagacaaggtcgccacgctgggagcggaa
gccggtcgtttgtgcagcatccacgctgatcacagcgatcagatccgtgagaagcaggcg
gaaatcgctgcctactggcaatccctgacggccaaggccaaggagcgcaagcagaagttg
gacgaatcgtacttcctgcaccgcttcctggctgatttccgcgatctggtgtcctggatc
aacggcatgaaggccatcatttcggcggacgagctcgcaaaggacgttgccggagccgag
gccctgctggaacgccaccaggagcacaagggcgaaattgacgcccgtggagacagcttc
aaggtgaccaccgaagccggccgtcaactgctggagcgtgaacattacgccgctgctgaa
gttcaggaaaagctggccgccctcgagagtgacaagagttcgctgctgtcgctgtgggag
gatcgtcgcatcttgtacgagcagtgcatggatctgcagctgttctaccgcgataccgag
caggccgacacctggatggctaagcaggaggcgttcctcgccaacgaagatctgggcgat
tcgctggactcggttgaggctctcatcaagaagcacgaggactttgagaagagtctggcc
gcgcaggaggagaagatcaaggcgttggacgtgttcgccactaagctcatcgatggccag
cactacgccgccgatgatgtggcccagcgtcgttcgatgctgttggctcgccgttcggct
ttgatggagaaatcgtcgatccgtcgtcagctgttggaagactcgagtggtctgcagcag
tttgaacgtgactgcgacgagaccaagggctggatcagcgagaagctcaagttcgccacg
gacgacagctatctggatccgaccaacttgaacggaaaggtccagaagcacaccaacttc
gagcatgagctgaccgcgaacaagagtcgcatcgaggacatcaccaccaacgggcagaac
ctgatcgagaagaaccattacgccgccgatcagatcaactcgcgcatgcaggagatcgtg
acgctgtgggaatcgctggtccaagcttcggacaagaagggctgcaagctgcaggaagct
tcccagcagcagcagttcaaccgtaccgtcgaagatattgagctgtggctgagcgaagtt
gagggacagctcatgtccgaagattacggcaaggatctgacgagcgtgcagaatctgcag
aagaagcacgctctgctggaggctgacgtgatggcccatcaggatcgtatcgagggaatc
aaggtcgccgcgaacaagttcgtcgagagtggccactttgatgcggacaacatccgtaac
aaggagagtgctctgtccaagcgttacggagcgttggccacaccgatggcggagcgcaag
cagcgtatgctggattcactgcaggttcagcaactgttccgggatctggaggatgaggca
gcttggattcgcgagaaggaaccggtggcggcttcgaccaaccgtggtcgtgacctgatt
ggtgtgcagaacttgatcaagaagcatcaggccgtcttggctgagatcaacaaccacgag
aaccgtgcgatgggagtgatttccaacggagagcagatgcttgcggaacagtccttcgcc
acggaggacatcaagcagcggttggacacgctcaaggaccagtggaactcgctgaaggag
aagtcgacccagcgtaagcaggatctggaggactctctgcaggcgcaccaatactttgcc
gatgccaacgaggcggaatcgtggatgcgcgagaaggaaccgctcgtgtccaaccaggac
tacggcaaggacgaagactcgtcggaggctctgctgaagaagcacgaagctctggtgtcc
gatttggaagcgttcggaaataccattcaagcgctgcaagagcaagccaagaactgccgt
cagcaggagactccggtcgtggacattaccggcaaggagtgcgtcatggcgctgtatgat
tacacggaaaagtcaccgcgtgaggtttccatgaagaagggtgacgtgctgactttgttg
aactccaacaacaaggactggtggaaggttgaggtgaacgatcgccaaggattcgtcccg
gcggcttacatcaagaagatcgaccccggtctaagtgccagccagcaaaatctcgtcgat
ggacactcgattgcgaagcgtcagtcgcagatcaacagccagtacgacaacctgctggcg
ctggctcgcgaacgccagaacaagctgaacgaaaccgtcaaggcgtacgttctggtgcgt
gaggccgccgatctgtccgcttggatcaaggacaaggagagccacgcccagatcaaggat
gtcggtgaagacttggaggaggtcgaagtgatgcagaagaagtttgacgactttaacgac
gatctgaaggccaacgaggttcgtctggccaagttgaacgagatcgccgtgcagctgact
tcgctcggtcaaaccgaagctgcgctgaagatcaagacccaaattcaaaccctgaacgag
gagtgggccacgctgcagaacattacccaggagcgtgccagccagctcggatcggcgcac
gaggtccagcggttccaccgtgacgttgacgaaaccaaggactggatcgccgagaaggac
aacgctctgacgaacgacgacctcggcaaggacctgcgtggcgtgcagacgcttcaacgc
aagcacgaagggctggagcgtgacttggccgccctgcgcgacaagatccgtcagctggac
gaaaccgccaaccggctgatgcagtcccacccggacacggccgaacagacgtacgccaag
cagaaggagatcaacgaggagtggcagcaggtcgtcggaaaggcgcagcagcgcaaggag
aagctgctcgactcgtacgatctgcagcgtttcctgagcgattaccgcgacctgatggcg
tggatcagctcgatgatgggcctggtcacgtcggaggagctcgcaaacgacgtcaccggt
gcggaagcgctgatcgagagacatcagaatcatcgtgctgaaattgattttcgttacggt
atcccgcaggaacaccgcaccgaggtggatgcccgcgccggaacgtttgccgcgttcgag
cagttcggcgccgagctgctgcaggcgaaccactacgcgtcgcctgaaatccaggagaag
atcgagaatctgtccaagtcgcgggaggagctcgagcaggcatggacggcccgtcggctg
cagctggaccagaacctggacctgcagctgtacctgcgcgattgcgagcaggccgaaaac
tggatgagcgcccgggaggcgttcctgaatgcggaggaggttgactcgaagggcgataac
gtggaggcgttgatcaagaagcacgaggactttgacaaggcgatcaacgggcatgaggag
aagatcggagcgctgcaggtgttggcggatcagttgatcgcgcaggagcactacgccgga
aagctgatcgatgacaagcgttcggaggtgttggaccgctggcgtcacctgaaggaagat
ctgatcgagaagcgatcgcggctgggcgatgagcagacgctgcaacagttctcgcgcgat
gccgatgagattgagaactggatcgcggagaagttgcagctggcgacggaggagagctac
aaggatccggccaacattcagtccaagcaccagaagcaccaggcgttcgaggcggaactc
gctgcgaatgccgataggatccagagcgtgctggctatgggaagtaacttgattgacaag
aaccagtgcagtggatctgaggacgccgtgcagaagcgactgactcagattgccgaccag
tgggaatatctgactcagaagacgacggagaagtcgctgaagctgaaggaggccaacaag
cagcgtacgtacattgctgcggttaaggatctggacttttggctgggtgaagtcgagagt
ctgctgacgtcggaagatgccggcaaggatctggcttcggtgcagaatctgatgaagaag
caccagctggttgaggccgacattcacgcgcacgaagatcgcatcaaggacatgaacgcg
caagcggattcgctggtcgagagtggccagtttgatagcgccggaatccaggagaagcgt
cagtcgattaacgagcgttacgaacgcatctgcaacttggccgcccatcgccaggctcgc
ctgaacgaagccaacacgctgcaccagttcttccgcgatattgccgatgaagagtcttgg
atcaaggagaaaaaactgctcgtcggttcggatgactatggtcgcgatttgacgggcgtg
cagaacttgaagaagaagcacaagcgtctggaggctgaactggcctcgcacgaaccggcc
atccaggctgtccaggaagctggcgagaagctgatggacgtgtcgaacctcggcgttccg
gagattgagcagcgcctgaaggccctcaaccaagcctgggctgaactgaagggtcttgca
gccactcgtggccaaaagttggacgaatccctgatctaccagcagttcctggccaaggtc
gaagaagaggaagcctggatcaccgagaagcagcagctgctgtcggttgaggactacggc
gattcgatggccgccgtccagggtctgctgaagaagcacgacgccttcgagacggacttt
gccgcccaccgggaccgctgctcggacatccgcgacaacggccaaacgctggtcacgaac
aacaaccaccacggcgagagcatctcgcagcggtgcgcccagctggacaagaagctggag
aacctgcaggcgctggccacccgccgcaagaacgccctgctcgacaactttgcctacctg
cagtttatgtggaaggccgacgtcgtcgagagctggatcgccgacaaggagaaccacgtc
aagtcggaggagttcggccgtgatctgtccacggttcagacgctgctcaccaagcaggag
acattcgatgccggtctctccgcgtttgagcaggaaggaatccacaacatcacggccctg
aaggatcagctgattagcgcaagccacgcccagtcggcggccatcctgaagcgccacgag
gacgtgctgacccgctggcagaagctgcgtaccgattcggaggcccgcaagtaccgtctg
ctcggcatgcaggagcagttccgccagatcgaggacctctacctgacctttgccaagaag
gcgtccgcctttaactcgtggttcgagaacgccgaggaggatctgaccgacccggtgcgc
tgcaactcgatcgaggaaattaccgccctgcgtgcggctcacgcccagttccaggcgtcg
ctgtcgagcgcccagtacgacttccaggcgctggccgatctggaccgcaagattaagagc
ttcaacgtgggacccaatccgtacacgtggttcacgatggaggcgctggaggacacctgg
cgcaacctgcagaagatcatcgaggagcgcgacgccgagctggccaaggaggtgcaccgc
caggaggagaacgacaagctgcgcaaggagtttgccaagcacgcgaacctgttccaccag
tggttgaccgagacgagatacgccattctgggatgggacatcaacggaacttccctcatg
gacggttccggcacgctggaggagcagttcgaggccctctgccacaaggccaacgaaatc
cgcgcccgccggggtgacctcaagaagattgaagagctcggcgcaacgctcgaggagcac
ctcatcctggacaatcgctacacggaacactccacggtcgggctggcccaacagtgggac
cagctggaccaactggcgatgcgcatgcagcacaacctcaagcagcaaatccaggcccgc
aaccagtctggcgtttcggaagactcgctcaaggagttctcgatgatgttcaagcacttt
gacaaggacaagagcggcaaactcaaccaccaggagttcaagtcctgcctgcgcgccctc
ggctacgatctgcccatggtggaggagggccagcccgaccccgagttcgaggagatcctg
aacgtggtcgacccgaaccgcgacggccaggtgtccctgcaggagtacatcgccttcatg
atttccaaggaaacggagaacgtccagagctacgaggaaatcgagaacgcgttccgcgcc
atcaccgcctccgaccgcccctacgtcaccaaggatgaactctactctaacctcaccaag
gacatggcggactactgcgtccagcggatgaaaccgttcaacgaccccaagacgggacac
cccgtcacgggcgccctggactacgtggagtttacgcgaaccctgttccagaactaa
DBGET
integrated database retrieval system
