Culex pipiens pallens (northern house mosquito): 120416080
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Entry
120416080 CDS
T07310
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpii04131
]
120416080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpii04147
]
120416080
Membrane trafficking [BR:
cpii04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120416080
Exosome [BR:
cpii04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120416080
Exosomal proteins of bladder cancer cells
120416080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
120416080
NCBI-ProteinID:
XP_039433691
LinkDB
All DBs
Position
2:69783837..69788166
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AA seq
1227 aa
AA seq
DB search
MLTNFETKSARVKGLSFHPKRPWILASLHSGVIQLWDYRISTLIEKFDEHDGPVRGISFH
AQQPLFVSGGDDFKIKVWNYKQRRCIFTLLGHLDYVRTTVFHHEYPWILSASDDQTIRIW
NWQSRSCICVLTGHNHYVMCAQFHPTDDIIVSASLDQTVRIWDISGLRKKNVAPGPSGLD
DHLKNPTATDLFGQADAVVKHVLEGHDRGVNWAHFHPTLPLIVSGADDRQIKLWRMNEYK
AWEVDTCRGHYNNVSCVLFHPRAELIVSNSEDKSIRVWDMTKRQCIHTFRREHERFWIMA
AHPNLNLFAAGHDSGMIVFKLERERPAYAVYGNCLYYVKERFLRELDFNTTTDSVVMTIR
GGGKTPVYSMSYNPALNAVLLCTRTSNLENSTYDLYSIPQKDSGSQNSETDSKRSSGVTA
VWVARNRFAVLDRSNQLVIKNFKNEVTKKIQTPVCDEIFYAGTGMLLLREPEHVTLFDVQ
QLRTLAQVKIAKCKYVVWSADMSHVALLAKHTLNICNRRLDLLCSIHESARIKSGAWDDS
GVFIYTTSNHIKYAIINGDHGIIRTLDLPIYITRVKNSQVFCLDRECRTRVLNIDTTEYK
FKLALINRKYEEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGLALECGNI
EVALEAAKALDDKQCWERLAQTALMQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKK
MNKIAEIRKDVSAQYQGALLLGDVKERVSILKNCNQTSLAYLTAKTHGLEEDATALAETI
TAAGKDLPQVQEDAKFLHPPVPIQQAESNWPLLTVSKGFFEGTMMSRGAATVHQALAATE
TVVEAADEGGWDVDDDLRDDDKFEDAKEDDDPKAEGGEGAGWDVGDEDLELPEELVAKIS
ASTAGDKGFYAVPPRGLPPSHMWTINSQLAADHVRAGSFETAFRLLHDQIGVVNFAPYKE
LFLESHLGSKTSYTCLPNLGPLTAHPHRNWKELNVKNTHPTLAFKLNDLVQALQSCYQLT
TTGKFTEAIEKLQYIILCIPLLVVESRQEIAEAQQLLTICREYVVGLQMETIRKGLPKNT
LDEQKRICELAAYFTHVNLQPVHQILTLRTALNLFFKLKNYKTAASFARRLLELGPRPEV
AQQARKILQACEMNESDEHTLQYDEHNPFTLCAVSYRPIYRGKPEEKCSLCSASYLPPYK
GVTCAVCRVAQVGKDVIGLRISASQFK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaactttgagacgaaatcggcccgggtgaagggactttcgtttcacccgaag
cggccatggattttggccagtttgcacagtggcgtgattcagctgtgggactaccgcata
agtacgctgattgagaagtttgacgagcacgacgggccggtccgtggcatttcgttccac
gcccagcagccgctgtttgtgtccggcggagatgattttaagattaaggtgtggaactac
aagcagcgtcggtgcatctttacgctgctggggcatttggattacgtgcggacgacggtg
ttccaccatgagtatccgtggattttgagcgcgtcggatgaccagacgatccggatctgg
aactggcagtcgcggtcgtgcatttgcgtgctgaccgggcacaatcattacgtgatgtgt
gcgcagttccacccgacggacgatattattgtgtcggcgtcgttggaccagacggtgcgg
atttgggacatttccgggttgcgcaagaagaacgttgcgccgggaccttcggggttggat
gatcatctgaagaacccgacggcgacggatctgtttggccaggcggatgcggtggtgaag
catgtgttggagggacacgaccgtggagtcaactgggctcacttccatccgacgttgccg
ttgatcgtgtccggcgcggacgatcggcagattaagctgtggcgcatgaacgagtacaag
gcctgggaggtggacacttgccggggtcattacaacaacgtttcttgcgtgctgttccac
ccgcgggcggaactgattgtgtccaacagtgaggacaagagcatccgggtttgggacatg
accaagcggcagtgcattcacacattccgacgcgagcacgagcggttctggatcatggcg
gcgcatcccaacttgaacctgtttgccgctggtcacgactcgggaatgatcgtgtttaag
ctggaacgtgagcgaccggcttatgccgtctatggaaactgtttgtattacgtgaaggag
cgattcctgcgcgagttggactttaacaccaccaccgattccgtcgtgatgaccatccga
ggcggtggcaaaaccccggtctacagcatgtcgtacaacccggcattgaacgccgttctg
ctgtgcaccagaacttcaaacctggaaaacagcacctacgacttgtacagcattccgcaa
aaggacagcggttcacagaactccgaaaccgacagcaagcgctcgtcgggagttacggcc
gtttgggttgctcgcaaccgattcgccgtactcgatcgctccaaccaactggtcatcaag
aacttcaaaaacgaagtgaccaaaaagatccaaaccccggtctgcgacgagatcttctac
gccggcacgggaatgctgcttctgcgcgaacccgaacacgtcaccctattcgatgtccaa
cagctccgaacccttgcccaggtcaagatcgccaagtgcaagtacgtcgtctggtcggcg
gacatgagccacgtggcgctactcgcgaagcacacgctcaacatctgcaaccgccggctg
gatctgctctgctcgatccacgaaagcgcccgcatcaagagcggtgcctgggacgactcg
ggcgtgttcatctacacgacctcgaaccacatcaagtacgccatcatcaacggcgatcac
ggaatcatccgaacgctggatctgccgatttacatcacgcgcgtcaagaatagccaggtg
ttttgtctggaccgggagtgccgcactcgggtgttgaacatcgacaccaccgagtacaag
ttcaagctggcgttgatcaaccgcaagtacgaggaagtgctgcacatggttcgtaacgca
cggctcgttggccagagcatcatcgcgtatctgcagcagaagggctacccggaggtcgcg
ctgcactttgtcaaggacgaaaagacccggtttgggttggcgctggagtgcggcaacatt
gaggtcgccttggaagcggccaaagcccttgatgacaagcagtgctgggagcggttggca
cagaccgcactgatgcagggcaaccaccaggtcgtcgagatgtgctaccagcgcaccaag
aactttgacaagctgtcgttcctgtacctcatcaccggtaacctggagaagctgaagaag
atgaacaagatcgccgagatccggaaggacgtgtccgctcagtaccagggtgcgctgctg
ctcggcgatgtcaaggagcgcgtgtcgattctgaagaactgcaaccagacgtcgctcgct
tacttgacggccaagacgcacgggctggaggaggacgcaacggcgctggccgaaacgatc
accgcagccggaaaggacctgccgcaggttcaggaagatgccaagttcctgcacccgccg
gtcccgatccagcaggccgaaagcaactggccgctgttgacggtttcgaagggattcttc
gagggcacgatgatgtctcgtggggctgccacagttcaccaggcgctggccgcaacggaa
accgttgtcgaagctgccgacgaaggcggttgggatgtggacgatgatctgcgcgacgac
gataagttcgaggacgccaaggaagacgatgatccgaaggccgaaggcggcgagggagca
ggatgggatgttggtgatgaagacctggaacttcccgaggaattggttgcgaagatttcc
gccagcaccgccggcgacaaaggcttctacgccgtacctccgagaggacttccaccatcg
cacatgtggaccatcaactcccaactcgcagcggatcacgtccgtgcgggatcgttcgaa
acggccttccgcctgctgcacgatcaaatcggcgtcgtcaacttcgcaccctacaaggaa
ctcttcctcgagtcccatctcggctcgaagacctcctacacttgcctacccaacctgggt
cccctcacggcccatccccatcgcaactggaaggaactgaacgtcaagaacacccatcca
acgctcgcattcaagctgaacgacctggtccaagctctccaatcctgctaccagctaaca
acaaccggcaaattcaccgaagccatcgagaagctccagtacatcatcctttgcatcccc
ctgctcgtcgtcgaatcccgccaggaaatcgccgaagcccagcaactccttaccatctgc
cgcgagtacgtcgtcggtctccaaatggaaaccatccgcaagggcctccccaaaaacacc
ctcgacgaacagaagcgaatctgcgaactggccgcctacttcacccacgtcaacctccaa
cccgtccaccaaatcctcaccctccgcaccgccctcaacctcttcttcaagctgaaaaac
tacaaaaccgccgcctccttcgcccgacgcctcctcgagctcggtccccgccccgaagtg
gcccaacaggcccgcaagatcctccaggcgtgcgaaatgaacgagtccgacgagcacacg
ctccagtacgacgaacacaacccgttcacgctctgtgccgtctcgtaccgaccgatctac
cgcggcaaacccgaggaaaagtgctcgctctgttccgcgtcctacctgccaccgtacaag
ggcgtcacctgtgccgtgtgccgggtggcccaggtcggcaaggacgtgattgggctgcgc
atcagcgcgtcccagttcaagtag
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integrated database retrieval system
