KEGG   Culex pipiens pallens (northern house mosquito): 120416605
Entry
120416605         CDS       T07310                                 
Name
(RefSeq) uncharacterized protein LOC120416605
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018  RNA degradation
cpii03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120416605
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120416605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpii03019]
    120416605
   03041 Spliceosome [BR:cpii03041]
    120416605
Messenger RNA biogenesis [BR:cpii03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120416605
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120416605
Spliceosome [BR:cpii03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    120416605
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 120416605
NCBI-ProteinID: XP_039434333
LinkDB
Position
2:97137160..97144461
AA seq 170 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQAKSRNRTELNKGGGGGGGRNQGGGGGMGQQGGRGGP
GGGQRNNANNRNTFGGGQGGGGGGGGGGGGNRPNNRAGLGNPNRNALNKK
NT seq 513 nt   +upstreamnt  +downstreamnt
atgttacccttatctcttctcaaaacggcccagagccatccgatgctggtggagctcaaa
aatggcgaaacatacaacggtcacttggtgagctgcgacacctggatgaacatcaatctt
cgcgaggtcatctgcacatcaaaggacggtgataagttttggcgaatgcccgagtgttac
atccgcggcagcaccatcaagtatctgcgcattccggacgaggtgatcgacatggtgaag
gaggacgtccaggccaagtcgcggaaccggacggagctgaacaagggcggcggcggcggt
gggggccgcaaccagggcggaggtggcggcatgggtcagcagggtggccgcggtggtccc
ggcggtggtcagcgcaacaatgccaacaatcggaacaccttcggtgggggacagggtggt
ggtggtggcggcggcggcggtggtggcgggaatcgaccgaacaaccgggccggcctgggc
aatcccaatcggaacgcgctcaacaagaagtaa

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