Culex pipiens pallens (northern house mosquito): 120417027
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Entry
120417027 CDS
T07310
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
120417027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpii04040
]
120417027
Ion channels [BR:
cpii04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120417027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
Motif
Other DBs
NCBI-GeneID:
120417027
NCBI-ProteinID:
XP_039434901
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All DBs
Position
1:45756405..45786311
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AA seq
1233 aa
AA seq
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MLKKPTESRENLVRSAGSLASTMAGDGGDAEADNRSLKSSVSVFDREVPDIILTQTEKKF
LLSAERGDCATVRRIIEEYKNDPDEFDINCVDPLNRSALIAAIENENIELIRLLLQSGIR
VQDALLHAIKEEYVEAVETLLLWEEENHVPGDPYSWEAVDRSSSSFTADITPLILAAHKN
NYEILKILLDRGASLPMPHDVRCGCDECVTSSEQDSLRHSQSRINAYRALSSSSLIALSS
KDPISTAFHLSWELRRLSRMESEFRAEYSTMRLNVQEFATSLLDHARTSNELEIMLNYSP
GEIDNWEPGERQTLERLKLALKFKQKLFVAHPNVQQLLAAIWYEGLPGFRRKSPMGQIMQ
VAKLGAMFPVYSLIYMVLPNSAMGQFMKKPFVKFIVHSASYAFFLMLLCGASQRIELQAL
ELFGNEWLQGIVREWKRKERGSLPGLCECFVILYVVGLIWHEIKSLWNDGLLEYVSDLWN
IVDFISNSFYIGWISLRFTSWFTVWRDENMGLNPWYPREQWDPFDPMLLSEGAFAAGMIF
SFLKLVHIFSINPHLGPLQVSLGRMIIDIIKFFFIYTLVLFAFGCGLNQLLWYYAVLEKN
KCYHLPSGLPDFENFEKSCAIWRRFANLFETSQSLFWASFGLVDLMAFELAGIKSFTRFW
ALLMFGSYSVINIIVLLNMLIAMMSNSYQIISERSDSEWKFARSRLWMSYFEDGDTLPPP
FNLVPSIKNFGKLCKCSNEKRPTTSILKRNREKAQRRHENVMKLLVRRYVTAEQRKRDDF
GITEDDVMEIRQDISTLRYELIDIFSQNGMKTPHVKPSDGGSAFAGKKGRVMERRILKDF
QIGFVEGILNEQFNGDNKPVDVFSTIAKAIGGKTSAKKKPEDWNALVRKNTTVRDPIGNS
TEAIMRRSRQSLRKQIIDNSNQGLEMDTNNLVAFNPKLSEVTPVTRVAYVKFMTTKLKKD
MKDIEGGELEGEDEGGAENTAGIANERRGSTKRSSLKKLVDLKDKINSIEAATADNKSPT
SQTTSQKEDDIPLRESPPTSSSPVTIEPPPGLANTTFKDEDHRIDMTKVRVRSPVIEDPN
EDGVASEDGDGHCLSPKRVDSIPERPNSPIPTSSPPLDKRTDAGKPSAADVLKAGSIKSR
TTSPPLAVEAGSSSRSPTPTRFAEKMVKPRTPTPPKSQDTLSPTGSTKCPPSPTPSSRLE
PPKSPARSASPSPSICSDKGKSKVTGKTISGWM
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaagccgaccgagtcccgggagaacctggtcaggtcggcgggctcgctggcc
tcgacgatggcgggcgatggcggggacgcggaagcggataaccgctccctcaagagttcc
gtgtcggtgttcgatcgtgaggtgccggacatcatcctgacccaaacggagaagaagttc
ctgctgagcgcggaacggggtgattgcgcaacggttcggagaatcatcgaggagtacaag
aacgacccggacgagttcgacatcaactgcgtggacccgctgaaccgttccgcgctgata
gctgccatcgagaacgaaaatatcgagctcatccggctgctattgcagtccggaatccgc
gtacaagatgccctcctccacgccatcaaggaggagtacgtggaagcggtggaaacgtta
ctactgtgggaggaggaaaaccacgtgcccggagatccctacagttgggaagccgtggac
cggtcctcttcctcgttcaccgccgacatcacgccgctgattttggccgcccacaagaac
aactacgagatcctgaagattctgctcgaccgaggggcgtccctgccgatgccccacgat
gtgcgctgcggatgcgacgagtgtgtaacgtcgagcgagcaggactccctccgccactcc
cagtcacgtatcaacgcgtaccgagcgctctcgtccagctcgctgattgcgctcagctcg
aaggatccgatctcgacggcattccacctgtcctgggagctgcgccggctcagccgcatg
gagtccgagtttcgggccgaatattcgaccatgcgtctcaacgtgcaggagtttgccacc
tctctgctcgaccacgcccgcacctcgaacgagctcgaaatcatgctgaactacagcccg
ggcgagatcgacaactgggagcccggcgagcggcaaacgctggaacgactcaagctagcg
ctcaagttcaagcagaaattgtttgtagcccaccccaacgtccagcagctgctggcagcg
atctggtacgaggggctgcccggcttccggcggaaatccccgatgggccagatcatgcag
gtggccaagctgggcgccatgttcccggtgtacagcctgatctacatggtgctgcccaac
tccgcgatggggcagtttatgaagaaaccgttcgtcaagtttatcgtccattcggccagt
tatgcgttctttttgatgcttctctgtggtgcctcgcaacggatcgagctgcaagcgctg
gagctgttcggcaacgagtggctccagggaatcgtccgggaatggaaacggaaggagcgc
ggatcgctgccagggctgtgcgagtgctttgtgatactgtacgtggtggggctgatatgg
cacgagataaagtcgctctggaacgatgggttgctcgagtacgtgtccgatctgtggaac
attgtggactttatctcgaactcgttctacatcggctggatcagcttgcggttcacgtcc
tggtttacggtttggcgcgacgaaaacatgggcctcaacccgtggtacccccgcgagcag
tgggaccccttcgatccgatgctgctgtccgagggggcgttcgccgccggcatgatcttc
tccttcctcaagctggtgcacatcttctcgatcaacccgcatctgggaccgctgcaggtt
tcgctcggccgcatgatcatcgacatcatcaagttcttcttcatctacacgctggtcctg
ttcgccttcgggtgtggcctcaaccagctgctgtggtactacgccgtgctggagaagaac
aagtgctaccatctgccgtccgggttgccagactttgagaactttgaaaaatcgtgcgca
atttggcgccgttttgcgaacctgtttgaaacttcgcagtcgctgttttgggcctcgttt
ggactggtggatttgatggcctttgagcttgccggaatcaagagttttacgaggttttgg
gcgctgcttatgttcggttcgtacagtgtcatcaacatcatcgtgctgctgaatatgctg
attgccatgatgagcaacagctatcagattatttcggaacgttcggacagcgaatggaaa
tttgcccgctcgcggctatggatgagttacttcgaggacggggacacccttccgccgccg
ttcaatctcgtgccttcgatcaaaaactttggcaaactatgcaaatgcagcaacgaaaag
cgacccacaaccagcatccttaagcgtaaccgcgaaaaggcccaacggcgccacgagaac
gtgatgaagctgctggtgcggcgttacgtcacggccgagcagcgcaagcgggacgacttt
ggcatcacggaggacgacgtcatggagatccggcaggacattagcacgctgcgttacgag
ctgatcgacatcttctcgcagaacggcatgaagacgccgcacgtgaagccgtcggacggg
ggcagtgcgttcgctggcaagaagggtcgcgtcatggagcgccgcatcctgaaggacttc
cagatcggcttcgtcgagggcatcctgaacgagcagttcaacggggacaacaaaccggtt
gacgtgttcagcaccatcgccaaggccatcggcggaaagaccagcgctaaaaaaaaaccc
gaagactggaacgccctggtccgcaagaacaccacagtccgggatcccattggaaactcg
accgaggccatcatgcgccgcagccggcagagcttgcgcaagcagatcatcgacaactcc
aaccagggcctggagatggacacgaacaatctggtcgcgttcaacccgaagctgtcggag
gtgacgccggtgacgcgtgtggcgtacgtcaagttcatgaccaccaagctgaaaaaggac
atgaaggacatcgaaggaggcgaattggagggtgaagatgaaggtggggctgaaaatacg
gccggaattgcgaacgaacggcgaggatcgaccaagcggagctcgctgaagaagctggtc
gacctgaaggataagatcaatagcattgaagccgccacggctgataacaagtctcctaca
tcccaaacgacatctcaaaaagaagacgacattccactccgagagtccccacccacatcc
tcctccccggtcacgatcgaaccccctccgggactggccaacaccaccttcaaggatgag
gaccaccgcatcgacatgaccaaggtccgcgtccgctccccggtcatcgaagaccccaac
gaggatggcgtagccagtgaagacggcgacggtcactgtctgtccccgaaacgagtcgac
agcatcccggagcgacctaactcgccaattccgacgtccagtccaccgctggataagcga
accgacgccggcaagccaagcgcggcggacgttttgaaggctgggtccatcaagagtcgg
accacttctccgcctctggcagtcgaagccggttcctcatcccggtcacccactccgacc
cggttcgcggaaaagatggtcaaacccagaacaccaaccccgccaaagtcccaagacacc
ctgtcgcccaccggttcaaccaagtgcccgccgtccccaacgccatccagccgcctggaa
ccgccgaaatcccccgcccgaagtgcgtccccgtcgccctcaatctgctccgacaagggc
aagtccaaagtcaccggcaaaacaataagcggttggatgtag
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