KEGG   Culex pipiens pallens (northern house mosquito): 120417438
Entry
120417438         CDS       T07310                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120417438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpii03041]
    120417438
Spliceosome [BR:cpii03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120417438
 Complex B
    120417438
SSDB
Motif
Pfam: RRM_1 RRM_7 Transformer RRM_9
Other DBs
NCBI-GeneID: 120417438
NCBI-ProteinID: XP_039435414
LinkDB
Position
Unknown
AA seq 452 aa
MGFPSGGALDRDNRGGGGGGGGGGGRRHRSRSRSRDRRRSRSRGGGGGGGGGGGDRGDRR
RSRSRSPYRKGRSRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVP
VVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFA
FLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMTDSAVAPVQEKFSGVISTVV
PDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAEYVEYSITD
QAIAGLNGMQLGDKKLIVQRASVGAKNANVAAVAPVQIQVPGLSLVGSSGPPTEVLCLLN
MVTPDELKDEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGKVFVEFNSIVDC
QKAQQALTGRKFSDRVVVTSYFDPDKYHRREF
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgggttttccttccggcggtgctttagatcgggacaatcgcgggggcggcggtggcgga
ggaggaggcggtggtcgacgacatcgttcgcggtccagatcgcgggatcgtcgtaggagt
cgcagccgtggtgggggcggtggtggaggaggagggggcggagatcggggcgatcggagg
cggtcccggtcgcggtcaccgtaccgaaagggccgttctcgccgcaggaagccgtcgctg
tactgggatgttccgccgccagggttcgagcacattacgcccctgcagtacaaggccatg
caggccgccggacagattccggctaacatcgtggcggacactccgcaagcggcggtcccg
gttgtggggtcgaccatcacgcgccaggcgcgccgactgtacgtgggcaacattccgttc
ggcgtgacggaggaggaaatgatggagttcttcaaccagcagatgcacctttccgggttg
gctcaggccgccggcaatccggtgctggcctgccagatcaacctggacaagaactttgcc
ttcctggagttccgctcgattgacgaaaccacccaggcgatggccttcgacgggatcaat
tttaaggggcagagtttgaagatacgccgaccgcacgattaccagccgatgccgggcatg
accgattcggcggttgcgccagttcaagagaaattcagcggcgtcatcagcacggtggtg
ccggattcgccccacaagatcttcatcggtggcctgcccaactatctgaacgaggaccag
gtcaaggaactgctgctgtcgttcggccagctgaaggcgttcaatctggtcaaggatgcc
gccaccgggcttagcaagggttacgccttcgccgagtacgtcgagtacagtatcactgat
caggcaattgctggcctcaatggtatgcagctcggcgacaagaagctaattgtacaacgg
gcaagcgtgggagcgaagaacgccaacgtggccgccgtggcgccggtgcagattcaggta
cctggcctgtcgctggtcggctcttccggtccccccaccgaggtgctctgcctgcttaac
atggtcacgcccgacgagctcaaggacgaggaagagtacgaggacatcctggaggacatc
aaggaggagtgcaacaagtacggcgtcgtgcgcagcgtcgagatcccccgccccatcgag
ggcgtcgacgtgcccggctgtggcaaggtctttgtcgagttcaactcgatcgtggactgt
cagaaggcccagcaggcgctaacggggcgcaagttcagcgaccgcgtcgtcgttacctca
tactttgacccggataagtatcatcggcgcgagttttag

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