Culex pipiens pallens (Northern house mosquito): 120418098
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Entry
120418098 CDS
T07310
Name
(RefSeq) nuclear factor of activated T-cells 5 isoform X2
KO
K17335
nuclear factor of activated T-cells 5
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpii03000
]
120418098
Transcription factors [BR:
cpii03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120418098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
HGTP_anticodon
TIG
Motif
Other DBs
NCBI-GeneID:
120418098
NCBI-ProteinID:
XP_039436300
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All DBs
Position
1:34469054..34569420
Genome browser
AA seq
1525 aa
AA seq
DB search
MNRVRVGGRQPTTTTSSVEASDGEPSNGSRKLRSAGKNWLLQSAQWSKSYDSVINYWNTS
RTTAAGSYETRSAAASPGSMGYSPPGGTIGPAGGQSADRFSGRLSASTTTLAAGQPAGGL
NVKHGVSPSSSLASKLHRKVLRVPAKRIPGKVLHHHHHPGKLASVASKLTAAKQRLQQQQ
QAQQLQQFNLQQQQQQQRPVGSSTSSSSSSSANVNNCDNSNDSGLGFDRSLDSAAALGAA
QFQNGTNPHHTSTGRPIQHSSNPDDDGVDSESGWSTTSSGNGHSSAPRRIRGGGKPASMF
GGTRRTTSRSSVASSRSSSTTSNKSLKRTHLELEDSAACSGALFALSTGKLTTTKLQASK
PIKPMARTVVAPKKIIIPVHRTTPAGKSTITIATANSTSLSLQAPSSSSPQSSPQKTAAA
APAKVMTSSASRSLNRLPGKRPPMLSGSLGGGGGPVSGGGPFSNSGVVTLQSQLGCSSRD
GKIQLQILTQPEQQHRARYQTEGSRGAVKDRSGNGFPVVRLVGHNKPAVLQVFIGTDVGR
VAPHMFYQACKVSGKNSTPCVERKLEGTMVIEVDMKPDGDMTVTCDCVGILKERNVDVEH
RFPDQSGPRAKKKSTRCRMVFRAAITHDDGSVETLQVCSQQIVCTQPPGVPEICKKSLVS
CPAEGGLELFIVGKNFLKDTKVVFQRRKAPLGGAATAGGISVMPWEQTVIPDKEYLQQTH
LICTVPPYISQDICEPVVVQIFIVSAGKRSETHNFTFTPKGHHTALSASTTTTGSFFGLG
GGDEIGPSGPAASVGGGNTGPASFNSLNSSFSSNQSEDVSASSEAASAKKSLFLWGSQLA
NAAAVQETLDTGMMPPPVNVLPLSGGTTSRRPSLLVEQLSNMSSPPNFKAELLDESSRSP
NNEDSLDRFPDSTDNSIDNSHILYRRRSVRQPSMDMMDESSSMSMLINENSAMDCGSGAG
GPMMGFRSGLSTLMETNEVSNSATSPSACELKVMNLCIKQEQQMSATTRNQIEQMIATTS
NLGNLNEINQIKAQLNVEGMLNAAVSPGGSLEKPPGMLEINSVVSLASNASHSPTSTVMM
HNEMPGGATNTNHSPLSQDVMLNSQSTITVPSPGNLVLSSPGSSNEVSPHPHASISPDII
LNPTISPTSMMCTPSNATVAATAAAAVAAAAAVSDGAAGLLSNQVFNNMAAVAANMIENQ
PQETTQAVQEIILNAAAEILTSQEPSVTTQSTINALISMNAQEMMTTSCQPQTQAIMSQQ
TLMSQCQPTAMMTAESMANALQQQQQQQQIVHNMLTESLHQQQQQATESLMLNLAAAAAA
ASQQQQQQSVPEQMEIGNPIMSSTVTSTVPQQQQPPQQPMDTSPTQQQQQQIPTQMVVET
AGGIQEQQQQQAVAAAAAAAAVGANASIPQELTIMSDNDLISYINPNAFDADPALMPELR
DLAKHLCNVLRKANLPVLDCSERNGGRSLAKQLHHLDSIAVPYCLLLRDQCLQNGLFQLR
SRDTTLSETIHISDLPQYLLKIVTS
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggtccgcgtcggtggtcgtcaaccgaccaccaccacttcttcggtggaagca
tccgacggcgaaccgagcaacggcagccggaagttacggtccgccggcaagaactggctg
ctgcagagcgcccagtggagcaagagttacgactcggtgatcaactactggaacaccagc
cggaccacggccgcgggttcgtacgagacgcgatcggctgcggcctcacccggatcaatg
ggatactcgccgccggggggcactataggcccggctggcggtcagtccgctgaccggttc
agtgggaggttgtcggcgtcgacgacgacgttggcggccggacagccggcgggaggatta
aacgtgaaacacggcgtcagtcccagctcgtcactcgcgtccaagctccatcgcaaagta
ttacgcgtcccggcgaagcgcatcccgggcaaggttctgcaccaccatcaccacccgggc
aaactcgcgtcggtcgcaagcaagctgaccgccgccaaacagcggctccagcaacagcag
caagctcaacagcttcaacagttcaacctgcaacagcagcagcagcagcaacgacccgtt
gggtcgtcgacgtcctcgtcctcgtcgtcatccgccaacgtcaacaactgtgataactcc
aacgactccggtctcggctttgaccgcagtctcgacagtgccgccgccctcggtgctgcc
cagttccagaacggcactaacccacaccacacctcgaccggccggccaatccagcactcg
agcaatccggacgatgacggcgtcgacagtgagtccggctggagcaccaccagcagcggc
aatggccactcctccgcgccacgaagaatccgcggcggtggcaagccggcctccatgttc
ggaggcacgcgccgaaccacgagccgatcgtcggtcgcgagcagccgcagctctagcacc
accagcaacaaatcgctcaagcgaacccacctagagctggaggactctgcggcctgttcc
ggggccctgttcgccctgtcgaccggcaaactgaccaccaccaagctccaagcctccaaa
ccgatcaaacccatggccaggacggtggtcgcgcccaagaagatcatcatccccgtccac
cggacgacgccggccggaaagtccaccatcacgatcgccacggctaatagcacgtcatta
tcattgcaagcaccgtcatcatcctcacctcagtcatcaccacagaagacggcggcggcg
gcgccggcgaaagtaatgacctcgtcggcatcccgctcgctgaaccggttaccgggcaaa
cgacccccgatgctgtccggatcgctaggcggtggaggaggacccgttagcgggggtggt
ccgttcagcaattccggcgtggtcacgctgcagtcccagctgggatgttcctcgcgggac
ggcaaaattcagctgcagattcttacccagcccgagcagcagcaccgggcgcgctaccaa
accgagggttcccgcggagccgtcaaggatcgcagtggcaacgggttcccggtggtgcgg
ctcgtcggccacaacaagcccgccgtgctgcaggtgtttatcgggacggacgtgggtcgg
gtggcgccgcacatgttctaccaggcctgcaaggtgtcggggaagaactcgacgccctgc
gtcgagcggaagctcgagggcaccatggtcatcgaggtggacatgaaaccggacggcgac
atgacggtgacgtgcgactgcgtcggcattctgaaggagcgcaacgtggacgtcgagcac
cggtttccggaccagagcggaccgcgggccaagaaaaagtccacccgctgccggatggtg
ttccgggcggcgatcacgcacgacgacggaagcgtcgaaacgctgcaagtgtgctcccag
cagattgtgtgcacccaaccgcccggcgtgccggaaatctgcaaaaagtctctagtctcg
tgcccggccgagggcggcctcgaactgttcatcgtcggcaaaaactttctcaaggacacc
aaggtggtgttccagcggcgcaaggccccgctcgggggcgccgcgaccgccggcggcatc
agcgtgatgccctgggagcagaccgtcatcccggacaaggagtacctgcagcagactcat
ctcatctgtaccgtcccgccgtacatcagccaggacatctgcgaaccggtggtagtacaa
atcttcatcgtgtccgccggcaagcggagcgaaacgcacaactttaccttcacgcccaag
gggcaccacacggcgctgagcgcgtccaccacgacgacggggtcgttcttcgggttgggc
ggtggggacgagattggcccgtcggggccggcagcaagtgttggtggtggtaatactggt
ccggcaagcttcaattctctaaactctagctttagtagcaaccagagcgaagatgtctca
gcgagcagtgaagcggcgtcggccaagaagtctttgttcctgtggggttcacagctggcc
aacgccgcggccgtccaggaaacgctggacacgggaatgatgcctccgccggtgaatgtg
ctaccgttgagcggtggaacgacgagccgacggccgtcactgctggtcgagcagctgtcc
aacatgtcgtcgccgcccaactttaaggcggaactgctcgacgagagcagtcgcagcccg
aataacgaagactcgctggatcggttcccggattcgacggacaattcgatcgacaacagc
cacattctgtaccggcggagaagcgttcgccagccgagcatggacatgatggacgaaagc
tccagcatgtcgatgctgatcaacgaaaacagtgctatggactgtggatcgggtgcgggc
ggtccaatgatgggcttccggtcgggactgagcacgctgatggagaccaacgaggtcagc
aactcggcgacatcgccatcggcatgcgaactcaaggtcatgaacctgtgcatcaagcag
gaacagcaaatgtccgccacgacgcggaaccagatcgagcagatgatcgcgaccaccagc
aatttgggcaacttgaacgaaatcaaccagatcaaggcacagctcaacgtcgagggaatg
ctgaacgcggccgtttcgccgggaggttccctggagaagccgcccggaatgctcgagatc
aactcggttgtatcgttggccagcaacgcatcgcactctccgacgtcaaccgtcatgatg
cacaacgaaatgccgggtggcgcaaccaacaccaaccactcgccgctctcccaagacgtg
atgctcaactcccagagcacgataacggttccatccccaggaaatctggtcctgtcatcc
cccggatcgtccaacgaagtgagcccccacccccatgcgtccatctccccggacatcatc
ctcaacccgaccatttcgcccacctcgatgatgtgcacaccctcgaacgcaacggtcgct
gccacggccgcggctgccgttgccgcagctgcagccgtttccgacggtgccgctggtctg
ctgtcgaaccaagtgttcaacaacatggccgccgtcgccgccaacatgatcgaaaaccag
ccccaggaaaccacccaagccgtccaggaaatcatcctgaacgccgcggccgaaatcctc
acctcccaggaaccctccgtaacgacccagtccacgatcaacgcgctaatctcgatgaac
gcccaggaaatgatgaccacctcgtgccaaccgcaaacccaggccatcatgtcccagcaa
acgctgatgtcgcaatgtcaaccgaccgccatgatgaccgccgaatccatggccaacgcc
ctgcaacagcaacaacagcagcagcaaatcgtccacaacatgctgaccgaaagcctccac
cagcagcaacagcaagcaaccgaatctctcatgctaaacctggctgccgcagcggccgcc
gccagtcagcagcagcagcagcagtccgtcccggaacagatggagattggcaatccgatc
atgtcctcgacggtgacctctaccgtgccgcagcaacaacaacccccgcagcagccaatg
gacactagtccgacccagcagcagcagcagcagattcctacccagatggtcgtggaaacg
gccggcgggattcaggaacagcagcagcaacaagccgtcgctgcggcggcggctgcagcc
gcggttggggccaacgcgagcataccgcaggagttaaccatcatgtccgacaacgatctc
atcagctacatcaacccgaacgcgtttgatgcagaccccgccctgatgccggagttgcgc
gacctggccaaacacctgtgcaacgtgctgcgcaaagcgaaccttcccgtgctcgactgc
tccgagcgtaatggcggtcgttccctggccaagcagctgcaccacctcgactcgattgcc
gtcccgtactgcctgctgctgcgcgaccagtgtctccagaatggcctctttcagctgcgg
tcccgcgacaccaccctcagcgaaacgattcacatctcggatttaccgcaatatttattg
aaaatagtaacaagttga
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integrated database retrieval system
