Culex pipiens pallens (northern house mosquito): 120418263
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Entry
120418263 CDS
T07310
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120418263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpii03009
]
120418263
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120418263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
WDR54
Beta-prop_EIPR1
Beta-prop_LRRK2
Cytochrom_D1
RAB3GAP2_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
120418263
NCBI-ProteinID:
XP_039436514
LinkDB
All DBs
Position
3:complement(103308568..103310366)
Genome browser
AA seq
525 aa
AA seq
DB search
MADFKKINAQIYAKTATTFSPDTIYWKKLGVPTLVKEFGAIDYIDFSPVEPYLFAVTASV
RVQIYNPVTKLVVKNITKFQEGAHCGSFRNDGNLLVAGDDLGKVRLFDVSTKSILRFFQG
HKAPVHRTFFNADGHHVSSFSDDKTVRYWDIATEKHLATYSEHSDYVRAGCTSPVSPNII
LSGGYDRKINMYDTRTNEKVLSLDHGSPVESLIFLPSGGIFISAGGTSVNVYDALAGGRK
IAQLSQHHKTVTCLQLASEGKRLLSGSLDRHVKIYDIATYQVVHTIDNTNGVLSLGVSKN
DDTLVTGMVDGLIAIHRRDSDKGKDEEEKGKARNKGRARFNNIFESADQQITDFRHDKIE
QFDRMLKKYEYNRALDSVFVASVMGKTPEKTVALIKELIRRKGLQRALKDRKHSFLVKFI
GFVLRHIGDYRFTPTLVDAANILLDVYEEEFGQFAGTDVGKMFINLSRRLKKEEKILNEF
LEVQGLLEMISAAADLNQPALGDEEKESDLQVSLSAQQQGVISVE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcggactttaagaagatcaacgcgcaaatctacgccaaaacggccaccacattctca
ccggacacaatctactggaagaagcttggagttccgacgctcgtgaaggagtttggcgca
atcgattacatcgattttagtccggtggagccgtatttgtttgcggtgacggcgtctgtt
cgcgtgcagatctacaacccggtcacgaaactagtcgtgaagaacattaccaagttccag
gagggtgcccactgcggttcgttccgaaacgatggaaacctgctggtggcgggcgatgac
ctcggcaaggtgcgactgttcgatgtgtccacaaagtcgattctacggttcttccagggc
cacaaagcacccgtccacaggacgttctttaacgccgatggccaccacgtgagcagcttc
tccgatgataaaaccgtgcgttactgggacattgccacggagaagcatttggccacatat
tcggagcactcggattacgtccgagcgggttgtacgagcccggttagtccgaatattatc
ctgtcgggaggatacgaccggaagatcaacatgtacgacaccagaaccaacgaaaaggtt
ctctcgctagaccacggaagtccggtagagtcgttgattttccttcccagtggcggtatc
tttatcagcgcaggaggcacctctgtcaacgtgtacgatgccttggccggaggacgcaag
attgctcaactgtcgcagcaccacaaaaccgtgacctgtttgcagctggccagcgaaggg
aaacggctgctctccggaagcttggaccgacacgtgaagatctacgacattgctacgtac
caggttgttcacacgatcgacaacacgaacggagtgctgagcttgggagtgtccaaaaat
gacgacaccctcgtaacgggaatggtcgacggacttatagccatccaccgaagggacagc
gacaagggcaaggacgaggaggagaagggcaaagctcgcaacaaaggtcgcgctcggttc
aacaacattttcgaaagcgcggatcagcaaattacggatttccgacacgataaaattgaa
cagtttgatcgcatgttgaaaaaatacgaatacaaccgcgcgctggatagcgtgtttgtc
gcgagtgtcatgggaaagaccccggaaaaaacggtcgccctcatcaaggaactcatccgg
cggaaaggattgcagcgggcacttaaggaccgaaagcattcgtttctggtaaagttcatc
ggtttcgtcttacgccacatcggcgactaccggtttacacccaccctggtggacgcagct
aacatcctgctggacgtgtacgaggaagagtttggccaatttgccggaacggacgtcggt
aaaatgtttatcaatctgtcgcgaagactgaaaaaggaggagaaaattttgaacgagttt
ctcgaggtgcaaggactgctggagatgatatcggccgcagccgacctgaaccagccagca
ctcggagatgaggaaaaggaaagtgacctgcaggtttcgctgtcggcccagcagcaaggg
gtaatcagtgttgaatga
DBGET
integrated database retrieval system
