Culex pipiens pallens (northern house mosquito): 120418477
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Entry
120418477 CDS
T07310
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii04519
Cadherin signaling
cpii04620
Toll-like receptor signaling pathway
cpii04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120418477
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120418477
04624 Toll and Imd signaling pathway
120418477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpii03000
]
120418477
Transcription factors [BR:
cpii03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120418477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120418477
NCBI-ProteinID:
XP_039436847
LinkDB
All DBs
Position
3
Genome browser
AA seq
1001 aa
AA seq
DB search
MFTYGVSLTQFCRHLREQHLQQPLSSSPTYSVLSMESSASSSSPSAVSTSHESAAKYYSS
NSPVSSASSNMSPKSTTSETSSFNMQNLNISASFPFYDDGSSSQMQTYHFTTGHGNAADH
PQIELSVPHLSILEQPVDKFRFRYQSEMHGTHGSLMGVHTEKSKKTFPSVELRGFQGEAK
IRCSLFQVDPSKRAAHSHHLVIKSGEIDLIDPHDIEVNAETGYVAMFQGMGIIHTAKKNI
AEELCKKIKRQRAVEMNREISLREEHQLQKEAVEMAKTMNLNQVCLCFQAFQVDPVSGMW
QQLCEPVYSNAINNMKSALTGELKICRLSSTAGNVEGGEEVFMFVEKVCKNNIKIRFYEL
DEFDQEIWQDWGTFSEADVHHQYAIAFKTPPYRNKDITEPAEVLMQLFRPRDKCQSEPVP
FKYKPRPGMLASASSSRKRQRVHSGNISSEIPTTVPNDGGLATMTAATAGSSRLPAFHQP
FPMVTQSTISKEFNKSGIIQEILESNVQGHSGGPTGDITFNSGDFRDFIQCSSEDLHKLI
NEIGEAHEQSKLETDAVASGSGPAGGSHQEAVRLERALESYLEANRHDKDVEILRKILAI
IKLFGRDYERCRELISALWMSSNKHKVNCLHMAIERRESVISCKLVELLQEFQLHDLLGL
VNDRNETALHLAVSSNQVAVVESLLLAGVRISCCDYKGNSTLHCAVVENCAEALDALVSH
CKRNGLRWDTANDDGYSPLQLAVMCRNLRIAKLLLDRGASPTERDLKHGNNILHIAVESD
SLDLVNYILEQVDKSLSDEPNNAGYTPLQLANARHQVNASNKLIVRELLRFNPGGLLEKE
PSIEDGDEDDEEAATQDDLPPPPVEAGSSESVLLSMNLTCNRVEVIQLLENHVPTAAELT
PLKTVPYGEGAGAVSELFDEPCLTELCELLNQNNVWKELGSLLDFNAFFSIWEMSPNPAE
MLLSYFEMQKMKLDHLIDILQALEQKEAIHCIDEMVCRNMK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtttacttacggagtttcgctgacgcagttttgtcgtcatttgagagagcaacatctg
cagcagccgctctcgtcctcgccgacctactcggtgctgtcgatggagtcatcggcttcg
tcgtcctcaccgtctgccgtcagcactagccacgagtccgcggccaagtactactccagc
aattcaccggtcagcagtgcgtccagtaatatgtccccaaagtcaacgacgagcgaaacc
agttccttcaacatgcaaaatctgaacatttccgccagcttcccgttctacgacgacggt
agcagcagccagatgcagacgtaccacttcaccaccggacacggaaatgcggcagatcat
ccccagatcgagctgtccgtgccgcacctgagcatcctagagcaaccggttgacaagttc
cgcttccggtaccagtcggagatgcacggcacacacggttctctcatgggcgtccacacg
gaaaagagcaagaaaaccttcccgtccgttgagctgcgtggcttccagggtgaagccaag
atccgctgctcgctgttccaggttgacccgtccaagcgggccgcccactcgcaccatctg
gtaatcaagagtggtgaaatcgatctgatcgatccgcacgacatcgaggtgaacgccgag
accgggtacgtggccatgttccagggcatgggaatcatccacaccgccaaaaagaacatc
gccgaggagttgtgcaagaagatcaaacggcagcgggccgttgagatgaaccgggaaatt
agcctgcgggaggaacaccagctgcagaaggaagcggtcgagatggccaagacgatgaac
ctgaaccaggtgtgcctgtgcttccaggcgttccaggtggacccggtgagcgggatgtgg
cagcagctgtgcgagccggtgtactcgaatgccattaataatatgaaaagtgccctcacg
ggagaattgaaaatctgtcggttgagctcgactgccggaaacgtcgaaggtggtgaggaa
gtcttcatgtttgtggagaaagtgtgtaaaaataacatcaagatccgattctatgaattg
gacgagttcgaccaggagatctggcaggactggggcaccttctcggaggcggacgtgcac
caccagtacgcgatcgcgttcaaaacgcccccgtaccgcaacaaggacatcaccgagccg
gccgaggtgctgatgcagctgttccggccccgggacaagtgccaaagcgaaccggtgccc
ttcaagtacaaaccccggccgggaatgctggccagcgcaagttcgtcccgcaaacggcag
cgcgtccactcggggaacatttccagcgagattccgacgacggtcccgaacgacggtgga
ctggcaacgatgacggcggccacggccggatccagccggctaccagcgttccatcagccc
ttcccgatggtcacccagagcaccatcagcaaggagttcaacaagtcgggcattattcag
gaaattttggagagcaatgtgcagggccattccggcggtccaaccggggacatcacgttc
aattccggtgactttagggatttcattcaatgcagctcggaagacctgcacaaattgatc
aacgaaattggcgaagcccacgagcaatcaaaacttgaaacggatgccgtggccagtggc
agtgggccagctggtggttcccaccaggaggcggttcggctcgagcgagctctcgagagt
tacctcgaggcgaaccggcacgacaaagatgtggaaattctgcgcaaaattctagccatt
attaaattgtttgggcgggactacgagcggtgtcgggagctcatttcggcactgtggatg
tcgtccaacaagcacaaagtcaactgtctccacatggccatcgagcgccgagaatcggtc
atatcatgcaagctcgtcgagctgctgcaagagtttcaactccacgacctgttgggactg
gtgaacgaccgcaacgaaacggcccttcatctggcggtttcctccaaccaggtcgccgtc
gtcgagagtctgctgctggccggtgtccgcatcagctgctgcgactacaagggcaattcc
accctgcactgcgccgtcgtggaaaactgtgccgaagccttagacgcactggttagtcac
tgcaagcgaaatgggcttcggtgggacacggccaacgacgatggctattcaccgctacag
ttggccgtaatgtgtcgaaatttgcgaatcgcgaagctgttgctggaccgcggagcgtcg
cccacggaacgagatctgaagcatggtaacaatatcctgcacattgcggtggagagtgat
tctctggacctggtcaactacatcctggagcaagtggacaagtcactcagcgacgaaccc
aacaacgccggctacacgccgctgcagctggccaacgccaggcaccaggtcaacgcgagc
aacaaattgatcgtacgggaactgttacggttcaacccgggtggcctgctggagaaggaa
ccctcgatcgaggatggcgacgaagacgatgaagaagctgcgactcaggatgacctgcca
ccgccaccggtggaagctggaagctcggaaagtgtgctgctttcgatgaatctgacctgc
aatcgggttgaggtaattcagctgttggagaatcatgtaccgacagctgctgaattgacc
ccgctgaagacggtgccctacggcgagggtgctggcgctgtgagcgagctgtttgatgag
ccatgccttacggagctgtgtgaattgctgaatcaaaataatgtttggaaggagctggga
tcgttgctggatttcaatgcgtttttctccatctgggaaatgtcgccgaaccccgccgag
atgcttctgagctactttgagatgcagaaaatgaagctggaccacctgattgacattctc
caggcgctggaacagaaggaagcgattcactgcatcgacgagatggtttgtcggaacatg
aagtaa
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