KEGG   Culex pipiens pallens (northern house mosquito): 120418871
Entry
120418871         CDS       T07310                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03030  DNA replication
cpii03410  Base excision repair
cpii03420  Nucleotide excision repair
cpii03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120418871
   03410 Base excision repair
    120418871
   03420 Nucleotide excision repair
    120418871
   03430 Mismatch repair
    120418871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpii03032]
    120418871
   03400 DNA repair and recombination proteins [BR:cpii03400]
    120418871
Enzymes [BR:cpii01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     120418871
    6.5.1.6  DNA ligase (ATP or NAD+)
     120418871
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     120418871
DNA replication proteins [BR:cpii03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    120418871
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     120418871
DNA repair and recombination proteins [BR:cpii03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     120418871
   NER (nucleotide excision repair)
    Other NER factors
     120418871
   MMR (mismatch excision repair)
    Other MMR factors
     120418871
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DUF5406
Other DBs
NCBI-GeneID: 120418871
NCBI-ProteinID: XP_039437371
LinkDB
Position
1:40086608..40089868
AA seq 899 aa
MIRTRLLSVLLHTTRDGSVRRLRTDFASHAVIRQQNRQLLIVDSVACTVNNGNFCCFVTS
AACSAAGKKPKLEASSADEDSPVKRPGRKSTVFDSSPSPSPQKKTSPGTNGGTSPKRRRL
VSSSEEDAPEAEKASPSPVKKSPSESKPVKKEADSKKSLKSKKTTTVKEEKKTPKSAKSK
NSGSAEKKTAVKKEQPEVKREPSESPKKEGVDTKDKAANVMSFFTSAKKEAVAASSAASK
NDGTEYNPGRKGYHPLEDAFWRKGEKVPYLALARTFQIIEETSGRLRMIEILANYFRSVI
LLSPGDLLASVYLSLNQLAPAYEGVELGIAEHSLMKAIAQSTGRSLAQIKTDAQTTGDLG
LVAEQSKSSQRMMFRPAPHTVEGVFGKLREIAKMTGTASMAKKMDKIQSMFVACRHSEAR
FIIRSLAGKLRIGLAEQSLLQALAQACAMTPPNQGDRKEPVVNALSKCGEASAKGKVEDI
ALVLKTVYCQCPNYNQIVPVLLEFGVDQLLEKCPMMPGTPLKPMLAHPTKGVQEVLERFD
GIDFTCEWKYDGERAQIHLLEDGSVNIYSRNQENNTSKYPDVIARLDRTRTDSVKSAILD
CEAVAWDPEKKQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGNPLVERPFLERR
ELLYKHFREIEGEWKYATRLDTGDIDELQRFLEEAVKGNCEGLMVKTLQKEATYEIAKRS
RNWLKLKKDYLTGVGDSLDLVVIGGYKGRGKRTGTYGGFLLACYDDENEEYQSICKIGTG
FSDEDLQQHTDFLKQHIVPRAKNYYRYDASHEPDDWFEPAQVWEVLCADLSLSPVHRAAQ
GHIDPEKGISLRFPRFIKIRDDKGVEDATSAKQVAEMYSNQDQIKNQQGNARDPEEDFY
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgattcgaacccggctgctgtcggtgctgctgcacacgacacgggacggttccgttcgc
cggttgcgaacggattttgcatcccacgcggtcatccgacagcagaaccgtcagctgttg
attgtagatagtgtcgcctgtaccgttaataatggtaacttttgttgtttcgtcacatcc
gcggcgtgcagcgccgctggcaagaagcccaaactggaggcttcgtccgccgacgaggac
agtccggtgaagcggccgggccgcaagtcgactgtgttcgattcttcgccgtcaccatcg
ccgcagaaaaagacttcgccgggaacgaacggtggaacgtcgccgaagcggaggcgactc
gtgtcgtccagcgaggaggacgcacccgaggcggagaaggcaagtccgtcaccggtcaag
aaatccccgagcgaaagcaagccagtcaagaaggaggccgactcgaaaaagtcgctcaag
tctaaaaagacgaccaccgtgaaggaggagaaaaagaccccaaaaagcgcaaagtccaag
aattctgggtccgccgagaagaagactgccgtcaagaaggagcagccggaagtaaagcgg
gaaccgtcggaatcgcccaagaaagagggggtggacacgaaggacaaggccgccaacgtg
atgagtttcttcacgagcgccaagaaggaggcggtggcggcgagttcggccgcgtccaag
aacgacggcacggagtacaacccgggtcggaagggttaccacccgctggaggacgcgttc
tggcgcaagggcgagaaggtgccgtacctggcgctggcgcggacgttccagatcatcgag
gagacgagcgggcggctgcggatgatcgagattctggccaactacttccggtcggtgatt
ctgctgagtccgggcgatctgctggcgagtgtttatttgagcttgaaccagctggcgccg
gcgtacgagggggtggagttgggcattgcggagcactcgttgatgaaggcgattgcgcag
agtacgggaaggagtttggcgcagattaagacggacgcgcagacgacgggggatttgggg
ctggtggcggagcagagcaagagcagccagcggatgatgttccggccggcgccgcacacg
gtcgagggcgtgtttgggaagctgcgggagattgccaagatgacggggacggcgtcgatg
gcgaagaagatggacaagatccagtcgatgtttgtggcgtgtcggcactcggaggcgcgg
tttatcatcaggtcgttggcggggaagttacggattgggttggcggagcagtcgctgctg
caggcgttggcgcaggcttgtgcgatgacgccgccgaaccagggcgaccggaaggaaccg
gtggtgaacgcgttgagcaagtgcggggaagcttcggcgaaggggaaggtcgaggacatt
gcgttggtgctgaagacggtgtactgtcagtgtccgaattacaaccagattgtaccggtg
ctgctggagttcggggtggatcagctgctggagaagtgtccgatgatgccggggacgccg
ttgaagcccatgttggcgcatccgaccaagggcgtgcaggaagtgctggagcggttcgac
gggattgattttacgtgcgagtggaagtacgacggggagcgggcgcagatccacctgctg
gaggacggcagcgtgaacatttacagccggaaccaggagaacaacacgagcaagtatccg
gacgtgattgcccggttggaccgcactcggacggattcggtcaagagtgcgattttggac
tgcgaagcggttgcgtgggacccggagaagaagcagattctgccgttccagatcttgagc
acccgcaagcggaaggacgccaacgaggccgacatcaaggtgcaggtttgcgtgtttatg
tttgatttgttgtatttgaacgggaatccgctggttgaacggccgtttttggagcgacgc
gaactgctgtacaaacacttccgggagattgaaggcgagtggaagtacgcgacccggctg
gacacgggcgacattgacgagttgcagcgcttcctggaggaggccgtcaagggcaactgc
gaagggttgatggtgaaaacgctccagaaggaggcgacctacgagattgccaagcgatcc
cgcaattggctcaaactcaagaaggactacctgaccggggtcggcgattcgctggacctg
gtcgtcatcggcgggtacaagggccgtggtaaacgaaccggaacgtacggcggcttcctg
ctcgcttgctacgacgacgagaacgaagagtaccagagcatctgcaagatcggaacgggc
ttctcggacgaagatctgcagcagcacacggacttcctcaagcagcacatcgtcccgcgg
gccaagaactactaccgctacgacgcatcccacgagccggacgactggttcgaaccggcc
caggtctgggaagttctgtgcgcggatctttcgctcagcccggttcaccgagccgcccaa
ggtcacatcgaccccgagaagggcatttcgctgcgattcccgcgcttcatcaagattcgc
gacgacaagggcgtcgaggacgccacctcggccaaacaggtcgccgagatgtactcgaat
caggaccagatcaagaaccagcagggtaatgcgcgggacccggaggaagacttctactag

DBGET integrated database retrieval system