Culex pipiens pallens (northern house mosquito): 120419241
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Entry
120419241 CDS
T07310
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082
ATP-dependent chromatin remodeling
cpii03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120419241
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120419241
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpii01009
]
120419241
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120419241
03036 Chromosome and associated proteins [BR:
cpii03036
]
120419241
Protein phosphatases and associated proteins [BR:
cpii01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120419241
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120419241
SWI/SNF complex
120419241
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120419241
PBAF complex
120419241
SWI/SNF complex
120419241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
120419241
NCBI-ProteinID:
XP_039437829
LinkDB
All DBs
Position
3:complement(174955439..174956775)
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AA seq
369 aa
AA seq
DB search
MSLKTYGDKPVSFQIEDGGEYFCIGSEVGNYLRLFRGLLYKKYPGMLRRTLSPEERKKLL
DSGISNQFLASSVSLLRASEVAEILEGNDEKYKAVAVTASEPPAPRESKSTKKQPPWVPT
MPNSSHLDAVPQATPINRNRVYNKKVRTFPMCFDDTDPTVNVENSAQTEVLVPIRLDMEI
EGQKLRDTFTWNRNECMITPEQFAEVLCDDLDLNPTPFVPAIAAAIRQQIEAYPSEPVVL
EEGSDQRVLVKLNIHVGNTSLVDQVEWDMAEKENNPEDFAIKLCAELGLGGEFVTAISYS
IRGQLSWHQRTYAFSETPLATVEVPFRTPSDADQWAPFLETLTDAEMEKKIRDQDRNTRR
MRRLANTYT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaagacgtacggcgacaagccggtcagcttccagatcgaggatgggggcgag
tatttctgcatcggttccgaggtggggaattacttgcggctgttccgagggttgctgtac
aagaagtacccggggatgttgcggaggacgttgagtccggaggagaggaagaagctgctg
gactcggggattagcaatcagtttttggcgagttcggtttcgctgttgagggcttccgag
gtggcggagatattggaggggaatgatgagaagtacaaggcggtggccgtaacggcttcg
gagccgccggcgcctcgcgagagcaagtcgaccaagaagcaaccgccgtgggttccgacg
atgccgaattcgagccatttggatgcggttccgcaggccactccgattaacaggaaccgg
gtttacaacaagaaggttcgcacgtttccgatgtgtttcgacgatacggatccgacggtg
aatgtggagaactcggcccagacggaggtgttggtgccgatccggttggatatggagatt
gaagggcagaagttgcgggacactttcacctggaaccggaacgagtgcatgattacgccg
gagcagtttgcggaggttctgtgcgatgatttggatttgaatccgacgccgtttgtgccg
gccattgcggcagcgatccggcagcagatcgaggcctatccgagtgagccggttgtgttg
gaggagggatctgaccagcgcgtgctggtcaagctgaacattcacgtgggcaacacctcg
ctggtggaccaggtcgagtgggacatggccgagaaggaaaacaatccggaagactttgcg
atcaagctgtgcgcggagctgggactgggcggtgagttcgtgaccgccatttcgtactcg
atccggggccagctgtcgtggcaccagcgcacgtacgctttcagcgagactccgctggcg
acggtggaggttccgttccggacaccgagcgatgccgaccagtgggctccgttcctggag
acgctgaccgacgccgagatggagaagaagattcgcgaccaggaccggaacacgcgacga
atgcgccgtctggccaacacgtacacgtaa
DBGET
integrated database retrieval system
