KEGG   Culex pipiens pallens (northern house mosquito): 120419487
Entry
120419487         CDS       T07310                                 
Name
(RefSeq) WD repeat-containing protein 48 homolog isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120419487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpii03400]
    120419487
DNA repair and recombination proteins [BR:cpii03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120419487
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_SPT8 WDR54 Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 WD_LRWD1 Beta-prop_NWD2_C Beta-prop_HPS5 Ge1_WD40 WD40_like Beta-prop_BBS7 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 120419487
NCBI-ProteinID: XP_039438106
LinkDB
Position
3:13384541..13403447
AA seq 710 aa
MLTHKNNQGGRKKMQVSFVIRDAEEKRHRNGVNALQLDPVNGRLYSAGRDAIIRVWNSTQ
TSSQEPYIQSMEHHNDWVNDIVLCCGGRNLISASCDTTVKVWNAHKGFCMSTLRTHRDYV
QALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSITGSKDSIYSLAMNPSG
TIIVSGSTENTLRIWDPRTCNKIAKLKGHAENVKALVVSEDGTQVVSGSSDGKIKLWSIG
QQRCIQTISVHSEGVWALLMTDNFSHVISGSRDKKIVMTELRNPTNSVLICEERAPVLSL
CYNIDQTGIWATTWNSDVRCWKLNKTDKLSNYSYSSNSSINSGGGGDGTPVTNSTSNATP
ASAGKGYEVACIKGGAAIKKYHVLNDKRFMLTKDSEQNVAIYDVLKVKKVEDLGKVDYEE
EIKKRSQRVYVPNWFTVDLKTGMPTIVLGQDEVDCFAAWVSAEAGLPEHAESGSDPKVNY
GSLLLQALLEYWKPPPPHHHLQGGVPDMENGCDGDIRGNEYFIVPKHTPIIFSEVGGRNV
CRLLVKDAAGETESALLSETVPSWVTNVVIERTIPKFIKLPFYLLAHPSMLKQDRSKKLD
LINQERLIANEFIQCRKVCEHVLEKVLGADLPGGGGGGGSSTGGGGNSNSSQNNSQSDAN
SEGSQVPAEERIELLCNDVICDPNMDLRTVRHFIWKQSSDLTFHYRTKSN
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgctgacgcacaagaataaccagggcggccggaagaagatgcaggtgtccttcgtgatc
cgggacgccgaggagaagcgccaccgcaacggcgtcaacgcgctccagctcgacccggtc
aacgggcggctctactcggccggccgcgacgccatcatccgggtgtggaactcgacgcag
accagctcccaggagccgtacatccagagcatggaacaccacaacgactgggtcaacgac
atcgtgctgtgctgcggcggccgaaacttgatcagtgccagttgcgacaccacggtcaag
gtgtggaacgcccacaaggggttctgcatgtcgacgctgcgaacccatcgggactacgtg
caggcgttggcgtacgccaaggaccgggagcaggtcgccagcgcgggcttggacaaggcc
atcttcctgtgggacgtgaacacgctgacggcgttgacggcgtcgaataacaccgtgacg
acgtcgagcatcaccggctcgaaggactcgatctacagcctggcgatgaacccgtccggg
acgatcatcgtgagtggttccaccgagaatacgttgcgcatttgggacccgcggacgtgc
aacaaaatcgccaaactcaagggtcacgcggagaacgtgaaggcgctggtcgtgtccgag
gacggtacgcaggtagtgtcgggcagctcggacggcaagatcaagctgtggagcatcggc
cagcagcgctgcattcagacgatttcggtccactcggagggcgtgtgggcgctgctgatg
acggacaacttttcgcacgtaatctccggcagccgggacaagaagatcgtcatgacggaa
ctgcgcaacccaacgaacagtgtgctgatctgcgaggagcgggcaccggtgctgagcctc
tgctacaacattgaccaaacggggatctgggccaccacgtggaacagtgacgtgcgctgc
tggaagttgaacaaaacggacaaactgagcaactacagctacagcagcaacagcagtatt
aacagcggaggaggcggcgatgggacgccggtgaccaactcgacgtccaatgcaacgccg
gcaagtgccggaaagggttacgaggtggcgtgcattaagggaggggcggcgatcaaaaag
taccacgtgttgaacgataaacgcttcatgctgacaaaggacagcgagcagaatgtggcg
atctacgacgtgttgaaggttaagaaggtcgaggatctgggcaaggtggactacgaggag
gagattaagaagcgcagccagcgggtgtacgtgccgaactggttcacggtggacctgaag
acggggatgccaacgatcgtgctcggccaggacgaggtggactgcttcgcggcgtgggtc
tccgccgaagccggcctgcccgagcatgccgagtccgggtccgatcccaaggtcaactac
ggcagtctgctgctgcaagccctgctcgagtactggaagcctccgccgccgcaccaccac
ctgcagggcggcgtcccggacatggagaacggctgcgacggggacatccgcgggaacgag
tactttatcgtgcccaaacacacgcccatcatcttcagcgaggtcggcggccggaacgtg
tgccggctgctggtgaaggatgccgccggtgaaaccgagagtgccctgctcagcgaaacc
gtgccgtcctgggtcacgaacgtcgtcatcgagcggaccatccccaagttcatcaagctg
ccgttctacctgctggcgcatccgtccatgctgaagcaggaccgcagtaaaaagcttgat
ttaatcaaccaggaacggctgatcgcgaacgagttcatccagtgccggaaggtgtgcgag
cacgtgctggagaaggtgctcggggcggacctgcccggaggaggtgggggtggcggcagt
agcaccggtggcggcggcaactccaactcgtcccagaacaacagccaaagcgacgccaac
tccgagggcagccaggtgccggccgaggagcggatcgagctgctgtgcaatgatgtgatc
tgcgaccccaacatggacctccgaacggtgcggcactttatctggaagcagtcgtccgat
ctgacgttccactatcgaacaaagtcaaattag

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