Culex pipiens pallens (northern house mosquito): 120420183
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Entry
120420183 CDS
T07310
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpii04131
]
120420183
Membrane trafficking [BR:
cpii04131
]
Protein recycling
Others
EARP complex
120420183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Vps54
Ribosomal_L22
Motif
Other DBs
NCBI-GeneID:
120420183
NCBI-ProteinID:
XP_039439093
LinkDB
All DBs
Position
1:complement(22700084..22718124)
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AA seq
1046 aa
AA seq
DB search
MDKTRDKMEEIKYRVLDLINKKKDVKIPKMGFTDYYVVQQQQGVSSGQQRQHSPHVPGGG
PRPASRAGSSSGKGSDIYCPFDDDDDDGGDQLDAAGDGSASKLSDQEILESTEAIYFDAG
SSTGLHELKKLSETDELLNCASIEKAMTTLKQQHKVVSKKVLQLILEQRSACNAEFQRIQ
ETEALLRETIAMCRTTRTHLDGSKKLLTTTNLEILAAYKKRQTLINLLKTLNALKSMRSI
DQRLQKRLSEADYSGAIAILLENKNLSERFQQYNCIESLSTKLQDTLLLSEVQLEAVLNE
IPTVGFDAKKYAKLQEAYKLLEKQLIAMDQLHMNFISSIHTAAFTVLKRHMEDRRLDVDG
STSSSSSSSGSSGGTGSTVGGAGGGKPQQQKLTFEQMCENVPSEKYIHCLTDLCRAFWKI
LVSYYQVRCWHQNQKLYEKGQEAQRKNSVDPAPSAVPTFHDEYIEQKLESGQFRLWNDIQ
AKIGVFINSTRLSALKYEYFIQILAIVQRLKKVGLEFCEDPSEKLMEHMQRQSVEFFRRY
HVACLEEIGLFFDHEVWVPIGSFSDVSQLQEYKNFKHALVKGQNGVVGRGGRSSSQENKT
LEGMGNSASSVHSQDESSLYGSCGYFLRFTEKSSPFDGGFDCTMLEEDILAGIADESSYY
YSEDSSDNNEICFQDQSPEAKQAKPSTTSSSGLTVTNTSLTVLRCIGRYLYFCKLLHSIA
PHIVTSMTELIDFYLYSVHELFSRDLPVPRDNLYSPALKRQLTRIQQTVITKLRKWPLSD
EMIRDDLANPELMYGLQRRIVAVESGLGLIAQFRLMQDYLLGLLGADPSAQDRLRQYVSD
ATECVPDVRKPVYMCVTARIVDLQNILHAMGKVKWDVNHVNVQHSSYIDTMNRGVQHFAM
RLEEISAQLVNIPKDALWDCFVHVLTHLLVEGFAAAKKCSAGGRALMQLDFTHFISILEI
ISGGKYPEHRAYVEQYVKAYYLPKDLLEQWLVEGFGRGYSVKHLTGVVQCACTSDKKLRQ
RLLALVESSGGGGTAGGDNGDLNKES
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaacacgggataaaatggaagagatcaagtaccgggtgctggatctgatcaac
aaaaagaaggacgtcaaaattccaaagatgggcttcaccgactactacgtcgtgcagcag
cagcagggagtcagttccggccagcagcggcaacattcgccgcacgttcccgggggaggg
ccgaggcctgcgtccagagctgggagttcctctgggaaggggtcggacatttactgtccc
tttgatgatgacgatgatgacggtggagatcagctggatgcagccggggacggaagtgcg
tcgaaactgtccgatcaggaaattctcgaatccaccgaagcgatttatttcgatgcggga
agtagtaccgggttgcatgagttgaagaaactctccgaaacggacgagctgctcaactgc
gccagcatcgaaaaggccatgaccacgctcaagcagcagcacaaggtcgtctcgaagaag
gtgctgcagctgatcctggagcagcggtcggcgtgcaacgccgagttccagcgcatccag
gaaaccgaagccctgctgcgcgaaaccatcgccatgtgccgaaccacccggacccatctg
gacgggtcgaaaaaactgctcacgaccaccaacttggagatcctcgccgcgtacaagaag
cgccaaacgctgatcaacctgctgaagacgctgaacgcgctgaagagcatgcgctcgatc
gaccagcggctccagaagcggctgtcggaggcggattacagcggtgccatcgcgatactg
ctcgaaaacaagaatctttcggagcgattccagcagtacaactgcatcgagtcgctgtcg
acgaagctgcaggacacgctgctgttgagcgaagttcagctggaggcggtcctgaacgaa
atcccgaccgttgggttcgacgcgaaaaagtacgcgaaactgcaggaggcgtacaaactg
ctcgaaaagcagctgatcgcgatggaccagctgcacatgaactttatctcgtcgattcac
acggcggcgtttacggtgctgaagcggcacatggaggaccggcggttggacgtggacggt
tctacaagtagcagtagcagcagtagtgggtcgagcgggggaacgggatcaacggtgggc
ggggccggtggtgggaagccgcagcagcagaagttgacgtttgagcagatgtgcgaaaat
gtgccgagtgagaagtacattcactgcttgacggatttgtgccgggcgttctggaagata
ctggtgtcgtattatcaggttcgatgctggcaccagaaccaaaagctgtacgagaagggc
caggaagcgcagcggaaaaactccgtcgaccctgccccatccgccgtgcccaccttccac
gatgagtacatcgagcagaagctggaaagtggccagttccggctgtggaacgacatccag
gcaaagatcggggtcttcatcaacagcacccggttgagtgcgctcaagtacgagtacttt
atccagatcctggcgatcgtgcagcggctgaagaaggtcgggctggagttctgcgaggac
ccgtcggagaagctgatggagcacatgcagcgccagagcgtggagttcttccggcggtac
cacgtggcgtgtttggaggagattggactgttctttgaccacgaggtttgggttccgatt
gggagtttcagcgacgtgagtcagctgcaggagtacaagaactttaagcacgcgttggtg
aaggggcagaacggggttgttggaaggggtggaaggtcgtccagtcaggagaacaagacg
ttggaggggatggggaacagcgcttcttcggtgcactcgcaggacgagagttcgctgtac
gggtcttgcgggtatttcctgcggtttaccgagaagagttcaccgttcgacgggggtttc
gattgtacgatgctggaggaggacattttggcggggatcgcggacgaatcctcgtactac
tattcggaagacagcagcgacaacaacgagatctgcttccaggaccaaagtccggaagcg
aagcaggcgaaaccatcgacaacttcaagcagcggccttaccgtaaccaacacttcccta
accgtcctgcggtgcatcggtcgctacctgtacttctgcaagctcctccactcgatcgcg
ccgcacatcgtgacctccatgaccgagctgatcgacttctatctctactccgtgcacgag
ctcttctcgcgggacctccccgtcccccgggacaacctgtactccccagccctcaaacgc
caactgacccgcatccagcagaccgtcatcaccaaactgcgcaagtggcccctctcggac
gagatgatccgcgacgacctcgcaaaccccgagctcatgtacggcctgcagcggcgcatc
gttgccgtcgagagtggcctcggactgatcgcccagttccggctgatgcaggactacctg
ctcgggctgctcggcgccgatccctccgcccaggaccggctccgccagtacgtgagcgat
gcgaccgagtgcgtgccggacgtccgcaagccggtgtacatgtgcgtgacggcgcggatc
gtcgacttgcagaacatcctgcacgccatgggcaaggtcaagtgggacgtgaaccacgtg
aacgtgcagcacagttcctacatcgatacgatgaacaggggagttcaacactttgccatg
cggctggaagagatctccgctcagctggtcaacattccaaaggacgctctctgggattgc
ttcgtgcacgtgctaacgcatctactggtggaaggtttcgccgccgcgaaaaagtgctcc
gccggtggtcgcgccctgatgcagctggattttacccactttatctcgatcctggagatc
atatccggagggaagtatccggaacatcgggcgtacgtcgagcagtacgtgaaggcgtac
tatctgcccaaggacctgctggagcagtggctggtggagggtttcgggcgcggttattcc
gtcaaacatctgaccggtgtggtgcagtgcgcctgcacgagcgataagaagttgcgccaa
cggttgctggccctggtggaaagttccggaggagggggaacggctggcggtgataacggc
gatctgaacaaggaatcttaa
DBGET
integrated database retrieval system
