Culex pipiens pallens (northern house mosquito): 120420329
Help
Entry
120420329 CDS
T07310
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120420329
03016 Transfer RNA biogenesis [BR:
cpii03016
]
120420329
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120420329
Spliceosome [BR:
cpii03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120420329
Transfer RNA biogenesis [BR:
cpii03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
120420329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120420329
NCBI-ProteinID:
XP_039439258
LinkDB
All DBs
Position
2:201698640..201701074
Genome browser
AA seq
728 aa
AA seq
DB search
MTAFEEFGVMPEIGQAIDEMEWMLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLRDIKEGKAGKPVGHKAKPWTLSFTDRGNAMAVTPDGLRCQSREFKEWHGCRG
TTGIRGGKGKYYYEATVTDEGLCRVGWSTEIAALDLGTDRFGFGFGGTGKKSNCKQFDNY
GEAFGKCDVIGCCLDLDRGEVSFTKNGVSLGVAFRIDGNIKGGSFFPAVVLKNAEMSFNF
GETDFKYPVPEGFVAVCKVAHDNLAVNPNTGGEASTQDLKPKPNAPQALVIEPSRELAEQ
TFNQIQKFKKHLKDPDVRELLLIGGVNIKDQMEVLQRGVDIIVATPGRLEDLISNGYVLL
TNCKFFVLDEADGLLKQGYTELIERLHKQIPKITADGRRLQMVVCSATLHSFEVKKLAER
LMHFPTWVDLKGEDAVPETVHHVVCMVDPQKDASWQAMRAHVTTDGVHAKDNVRPGSNTA
ETLSEAIKMLKGEYTLRAINEHQMDRAIIFCRTKLDCDNLERYLRQVGGQKYSCVCLHGD
RKPQERKANLEKFKAKQVKFLICTDVAARGLDVTGLPFIINVTLPDEKSNYVHRIGRVGR
AERMGLAISLVATVPEKVWYHGQWCSSRGKNCWNTQLTDVKGCCMWYDEKMYLAEIEDHL
NVTIQQVDKDLKVPMNDFDGKVTYGEKRLNTGTGYKDHVEQLTPVVKELARLEREAQVLY
NKRFLVAQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattcgaggagttcggcgtaatgccggaaatcggccaggcgatcgacgagatg
gagtggatgctgccgacggacgtccaagcggaggcaatcccgctgattctgggcggtggc
gacgtgctgatggcggcggaaacgggcagtggcaagacgggtgcgttctgcctgccgatt
ctgcagatcgtgtgggaaacgctgcgggacatcaaggagggaaaggcgggcaagccggtg
gggcacaaggcgaagccgtggacgttgagcttcaccgatcgggggaacgcgatggcggtg
accccggacgggttgcgctgtcagtcgcgggagtttaaggagtggcacgggtgtcgtggg
acgacggggattaggggagggaagggaaagtactattacgaggcgaccgttacggatgag
ggtctgtgccgggttgggtggtcgacggagattgcggcgctggatttgggcacggatcgg
tttgggtttgggtttggcgggacggggaagaagtcgaactgcaagcagtttgataattac
ggggaggcgtttgggaagtgcgacgtgattggatgctgtttggatttggaccggggggag
gtcagtttcacgaagaacggggtgtcgcttggggtggcgttccggatcgatggcaacatt
aagggagggagctttttcccggcggtcgtgctgaagaacgcggagatgtcgttcaatttc
ggggagacggatttcaagtatccggttccggaagggtttgtggccgtttgcaaggtggcg
catgacaacttggcggtcaatccgaacactgggggcgaggcgtcgacgcaggatttgaag
ccgaagccgaatgcaccgcaggcgttggttattgagccttcgcgagagttggccgagcag
actttcaatcagattcagaagttcaagaagcatttgaaggatccggatgttcgggagctg
ttgctgattggtggcgtcaatattaaggatcagatggaggttcttcaacggggcgtggac
atcatcgtggcgactccgggaaggttggaggatttgattagcaacggttacgtgttgctg
accaactgtaaattcttcgttctggacgaagccgacggattgctgaagcaaggctacacc
gaactgatcgagcgtctgcacaagcaaatcccgaaaattaccgccgacggccgtcggctc
cagatggtcgtttgcagtgccacgttacactcgttcgaggtgaagaaactcgccgaacga
ctgatgcacttcccgacctgggtcgatctgaagggagaagacgccgttccggagacggtc
catcacgtggtttgcatggtcgacccgcagaaagacgcctcgtggcaagcaatgcgcgca
cacgttacaaccgacggcgtccacgccaaggacaatgtccgccccgggtccaacaccgcc
gaaaccctgtccgaagcgatcaaaatgctcaaaggcgagtacacgctgcgtgccatcaac
gagcaccagatggaccgcgccatcatcttctgccgcaccaagctggactgcgacaatctg
gaacgctacctgcgccaggtcggcggccaaaagtactcgtgcgtgtgcctccacggcgac
cgcaagccccaggaacgcaaagccaacctggaaaagttcaaggccaaacaggtcaagttc
ctgatctgcactgacgtggccgcccgcggactcgacgtcaccgggctgcccttcatcatc
aacgtaacgctgccggacgaaaagagcaactacgttcaccggattggccgcgtcggacgt
gccgaacgcatgggtctcgccatctcgctggtcgcaaccgtccccgaaaaggtctggtac
cacggccaatggtgctcctcccgaggcaaaaactgctggaacacccaacttaccgacgtc
aaaggctgctgcatgtggtacgacgaaaagatgtacctcgcggagatcgaggaccacctt
aacgttactatccagcaggtcgacaaagacctcaaagtcccgatgaacgactttgacggc
aaggtcacgtacggcgagaagcgactcaacaccggaaccggctacaaagaccacgtcgaa
caactcacgccggtcgtaaaggaacttgcccgactcgagcgcgaagcccaagtcctctac
aacaagcgattcctggtggcgcagtaa
DBGET
integrated database retrieval system
