Culex pipiens pallens (northern house mosquito): 120420475
Help
Entry
120420475 CDS
T07310
Name
(RefSeq) AF4/FMR2 family member lilli isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120420475
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120420475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
SR-25
Motif
Other DBs
NCBI-GeneID:
120420475
NCBI-ProteinID:
XP_039439450
LinkDB
All DBs
Position
2:complement(41281656..41396430)
Genome browser
AA seq
1699 aa
AA seq
DB search
MKSSKNLYSFSSVAGTLGAAAAAGTGPSSSSSFSSSSSSGSSIGGSATSSSSLSSTSLQS
TRGGGRGLDMKKSQKPRHDEQDRMERRERDKQQRAFLQAERDAEPAAPIFAAPVKVLSPS
DTDLQIVAKLGNYDMAKNLYLYDSSGHNLVVGIANPGTPRSGMPASPMPNSLSMASSLTL
PPTSSSSSQQQQYIRTLPPKTNSNSSSSNSNSKSSGSSSSSSNANFVKPMDNRPMYNGAG
RTSSGNSSSSSGRHHNQMSSSVAGSFPKHEVHSKNSLMNGVRTSGTAGDKLPSQLPNGRL
PPQVSNAKLPPRVSTTSDSMLTPMKTERILSEIKTMFSVGTPLTEIGATPRKEPDNKFCL
NNPGVPKHKYAPAPTMRPPSSFKTPLDSIPSMLKPIGPLEDDAHGSDSDGGDSSKNKRNS
SDTSSNESAGESSSEDSNIGHKAGGVGGLGASGSSSGIGSSLSGSTGGGGGSVGPGSGGS
EPTASGSPPQRLMNWSLMNFLPPPVLNETSSSHSQSANNPGSVGSNHNMNENSNSPLMPG
SPPTTATATIIKNEPPTMEDDHLSNSSSNNENAFAVKQEPFPSENSTSSPSAAGIPTTTP
SSALPGLNGGCTEDFTKHDLEHLPGLVKSPEGSPAEKDSNDQMDSIESDEVSRALLKAKE
LRNIQPLSGISDIDDNNVEPSGGAGLVSAGSTTLSRSGQKVKRKRKTLKDRERDASSSSD
DAGFSSFEKDKITKGRGRPRKNPPAAGSIKGSSSTRQSDADSVTSSASKRRLSVSSSKTV
ASTPSKKDGPTTPAKKQTGSRKRPARAPTKPTISREMLTTTDDSDSENARDSNVANSELD
DKPAKSPQKSKKGTPKAPASEVDQLSSDSNEEILNRRTPPPLMSPPFAPLSSGTNSQPSS
VSKVLPRKISTASSVSIDEDDRSDRDDDDEDDDDDDDDHRNGSASDSGSASDGGVKREKK
INKIKSDKNKKDTLRKLFSIKAAEGGAKGGKGGKGKGKGQVVIEEVHHTKASSIQTTVNT
TPNSKSQHHLNVPATDRNASLTSPPPPHTAPSIVEKVLLSPARTALTNISLMCRIELSRL
LKVPPQPPAGAKLAKANESYSAQRSASARQKSTSPYELKTRRNSIAYCDERRRVDVPPTT
TTNYRLTEGLDPKQLLAGDSALLLENGRHRSNSINSNASEHLSRERSSRDFRETSSPSIP
PHLHHNSNHNTSTSSLSSGSGSAQKQSSSASSAKQHLTYDEKLPAKSEKLQYGTTTTTPN
YPLKEEKYGKALNIKHENLIKQEYLDGEDSKLSPAALSKLTNGPPQSTQSADATSSSRRK
RTSSSSSSSHKEKRRKKDKSGGSAAAAAAATASNAQTESLDQMPPTNHDRLGGVDQQNTQ
GHLPPASTTNTNTITSNSTKQQLSEPTESATAGTAPTTQTIIKKIHVSYFERSNEDELEV
RDQNRYLSEAKRLKHAADREGDHLAQAMLYLEAVLFFLLTGDTMERDPITEKAAFTMYKD
TLSLIKYISSKFRSQQQHLTVQGNIHSKVAILSLRCQSLIYLKLYKMRRHDIKEVQRIIA
EYNQKPNTTVSADMVNGNTPSPLSPTSVGSQSSGYCSGQTGQTGPIPGSSISSSPSPCLL
MPVHVHMAFQKQATLFNHLLNCQDLWEQADNLVIRGNHTDFFIDLDHENGPMTLHSSLYN
VVKYVQAGIQKLRRKTLQD
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtagcaagaacctgtactcgttcagctcggtagcaggtactttgggagcagca
gcagcagcaggaacaggaccatcatcatcatcatcattctcgtcgtcgtcgtcgtcagga
tcgtcgattggtggatcggcaacgtcgtcgtcgtctctgtcctctacgtcgctgcagtcg
acgagaggcggaggtcgtggtttggatatgaaaaaatcgcagaaaccaaggcacgatgag
caggacaggatggagcggagggagcgcgacaagcagcaacgagcatttctacaggccgaa
cgtgacgcagaaccagcagccccgatattcgccgcgccggttaaagtgcttagtccatcg
gacacggacctgcagattgtggccaagctcggcaactatgacatggccaagaatctctac
ctgtacgactcgtcgggacacaacctggtggtgggaatcgcgaaccccgggaccccgcgg
tccggcatgcctgcctcgccgatgccaaatagcctcagcatggccagctcgctgacactg
ccaccgacgtcgtcgtcgtcttcgcagcagcagcagtacatccgaacgcttccgccaaaa
accaatagcaatagtagcagtagtaatagtaatagcaaaagttccggcagcagcagcagc
agcagcaatgccaacttcgtcaaaccaatggacaaccggccgatgtacaacggcgcaggt
cggacgtcttcggggaacagcagcagtagtagtggccggcaccacaaccagatgtcgtcg
tcggtggcgggatcgtttcctaagcatgaggtgcactcaaaaaactccctgatgaatggc
gtccggacgagtggaaccgccggtgataagttaccctcacagctgccaaacggacgtctg
cctcctcaggtgtcaaacgcaaaattgccccctagagtaagtaccacaagtgatagcatg
ctgacgccgatgaagacggagcgcatcctgagcgagatcaagaccatgttcagcgtgggc
acgccgctgacggagattggcgcaacaccgcgcaaggagccggacaacaaattctgcctt
aacaatccgggcgtgccgaagcacaagtacgcaccggcgcccacgatgcggccaccgtcg
tcgttcaagacgccactggactcaattccttctatgctcaaacctatcggtccgctggag
gatgacgcgcacggctcggacagcgacggcggtgactccagtaaaaataaacgcaactcc
agtgatacctcatcgaatgaaagcgcgggcgaatcgtccagcgaggactccaacattggg
cataaggccggcggtgtgggcggactcggtgccagcggaagcagtagtggcatcggcagc
agtctgtccggcagcaccggcgggggcggtggctcggttggacccggaagtggcggcagt
gaaccgacggcgtccggaagtccaccgcagcggctaatgaactggagtctgatgaacttt
ctgccacctccggtgctgaacgagacgagcagcagtcactcgcagtcggccaacaatcct
ggttcggttgggtcgaaccataatatgaacgaaaattccaactcaccgctgatgcctggg
tcaccgccgacgacggcgacggcgacgatcattaaaaatgaaccgccgaccatggaggat
gaccacctttccaacagtagcagtaacaacgagaacgcgtttgccgtcaagcaggaacct
ttccccagcgagaacagcacgtcctctccgagtgccgcaggaattccaacgaccacgccc
agttcagcacttcccggtctgaacggtggctgcacggaagatttcaccaaacatgatctc
gaacacctgcccgggctggtgaaaagtcccgagggaagccctgccgaaaaggactccaac
gatcagatggatagcatcgaatcggacgaggtcagccgggcgctgctcaaagccaaggag
ctgcgaaacattcaaccactgtcgggcatttccgacatcgacgacaataatgtggagccc
agcggaggagcggggctggtcagtgcgggcagtaccaccctgtcacgatccggccagaaa
gtgaaacgaaagcggaagacactcaaggaccgcgagcgggacgcgtccagcagtagtgac
gatgccggcttttcatcgttcgaaaaggacaaaatcaccaaaggtcgggggcgaccccgg
aagaacccaccggcggcaggttccatcaagggctcttccagcacaaggcaatcggacgcg
gactcggtcaccagcagtgccagcaagcggagactttccgtctcctcgagcaaaacggtc
gcctcaacgcccagcaaaaaggacggaccaacgacgcccgccaaaaagcagacaggctcg
cggaagaggcccgcccgtgcccccacgaaacccaccatcagccgggagatgctcacgacg
acggacgactcggattcggagaacgcgcgcgacagcaacgtggccaacagcgaactggac
gacaaaccggccaagagtccgcaaaagtccaaaaagggaacgccgaaagcgcccgcctcc
gaggtggaccagctgtcgtcggacagtaatgaagagatcttgaaccggaggacgccgcca
ccgctgatgtcaccgccttttgctccactttccagtggtaccaatagccagccgtcgtcg
gtgtcgaaggtgctgccccgtaaaatctccaccgcgtcgtcggtttcgatcgacgaggac
gaccggtccgatcgggacgatgacgacgaagacgacgacgatgacgatgacgaccatcgg
aacgggtcggctagtgattccggaagtgccagcgacgggggtgtcaagagggagaagaag
atcaacaaaatcaaaagtgataaaaacaagaaggacaccctgcgcaagctgttctccatc
aaggccgccgagggtggtgccaagggcggcaagggaggcaagggcaaaggcaagggtcag
gtcgtgatcgaggaggtgcaccacacaaaggcgtcctccatccagacaacggtgaacacc
acgccaaattctaaatcccagcatcacctgaacgtgccagcgaccgatcggaatgccagc
ctaacgtctccacctcccccgcataccgcaccgtcgatcgtggaaaaagtgcttttatct
cccgccagaactgccttaaccaacatctccctgatgtgtcgcatcgaactgagtcgactg
ctgaaggttcctccacagccgccggcaggtgccaagctggccaaggccaacgaaagctac
agtgcccaacgcagtgcctccgctcgacaaaagagcaccagcccgtacgagctgaagacg
cggcgcaactccattgcctattgcgacgaacgtcgacgggtggatgtgcccccaaccacc
accaccaactacagactgaccgaggggctcgaccccaaacaactgctggccggtgattcg
gccctcctgctcgagaacggccgccatcggagcaactccatcaacagcaacgcgagcgaa
cacctatcgcgggaacgaagctcgcgggacttccgagaaacgtcctccccctcgatacca
cctcatctacatcacaacagcaatcacaacacctccacctcgtcactttcctccgggtcc
ggttcggcccagaagcaatcctcctcagcctcctccgccaagcaacacctcacgtacgac
gaaaagttacctgccaaaagcgaaaagctccagtacggcaccaccaccaccacccccaac
taccccctcaaggaggaaaagtacggcaaagcgctcaacatcaagcacgagaacctcatc
aagcaggagtacctggacggcgaggatagcaagctttcgccagcggcgctctccaagctg
accaacgggccgccgcagtcgacgcaaagcgctgacgcaactagcagcagtagacggaag
cgaacctccagttcgagcagtagctcgcacaaggagaaacgccggaaaaaggacaaaagc
ggtggtagtgctgcagccgcagctgccgccaccgccagtaacgcacagactgaatccctt
gaccaaatgcccccaaccaatcacgaccggttaggcggcgtggaccaacaaaacacccaa
ggacatctaccacctgcctcgaccaccaacaccaacaccatcacctcaaacagcaccaag
cagcaactgtcggaaccgacggaatccgcgacagccgggaccgctcccaccacccaaacc
atcatcaagaagatccacgtgtcgtactttgagcgctcgaacgaggacgagctggaggtg
cgcgaccagaaccggtacctgtcggaggcgaagcggctcaagcacgcggcggaccgcgag
ggcgaccacctggcccaggcgatgctgtacctggaggcggtgctgttcttcctgctgacc
ggcgacacgatggagcgcgatccgatcaccgagaaggccgcgttcacgatgtacaaggac
acgctcagtttgatcaagtacatctcgtcaaagtttcgtagccagcagcagcatctcacc
gtgcaggggaacattcacagcaaggtggcgatattgagcttgcggtgccagtcgttgatc
tacctgaagctgtacaagatgcgccggcacgacatcaaggaggtgcagcgcatcatcgcc
gagtacaaccagaagccgaacaccacggtgtcggcggacatggtcaacgggaacacgccg
tcgccgctgtcgcccacctcggtgggatcgcagagctccggctactgctcaggtcaaacc
ggccaaaccggtccgattccgggttcgtcgataagttcttccccgtcgccgtgcctgctg
atgccggtgcatgtgcacatggcgtttcaaaagcaggcgaccctgttcaaccacctgctc
aactgtcaggatctgtgggaacaggcggacaacctggtgatacggggcaaccatacagat
ttcttcatcgatctggaccacgagaacggtccgatgacgctgcacagttcgctgtacaac
gtggtcaagtacgtgcaggccggcatccagaagttgcggcgcaaaacgctgcaggactga
DBGET
integrated database retrieval system
