Culex pipiens pallens (northern house mosquito): 120420488
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Entry
120420488 CDS
T07310
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpii03000
]
120420488
03036 Chromosome and associated proteins [BR:
cpii03036
]
120420488
Transcription factors [BR:
cpii03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120420488
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120420488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Thy1
DUF3854
DUF5798
Motif
Other DBs
NCBI-GeneID:
120420488
NCBI-ProteinID:
XP_039439467
LinkDB
All DBs
Position
Unknown
AA seq
2153 aa
AA seq
DB search
MAYSDTDESSVGISSRSGSWQIDSGSSDYEGGVAPAVPKVPAVVGGRRRNPRRRAAKEAG
SFRAPSELRSDDSLKVGKKKKKKGVAPVPKVVLPAGERKRNTRKKPQAAAIERSSEVSGE
EDEEEGEDSVAQMRAMLRLPTVLIQVRKYGMDIVDICDQMENLLLDEGNNDEMSRLKQKL
NKLSEKCYQKVRAEFDCENFKEPKPRLSRRDKHKPKPVIESDDDSPMRPRRLARSDSVDY
TSPDRTGDSTQQQPDDSHKRDESAKDSGNPSSGQDESPSKNDTDVEPNAPSVDEPEDMEP
IRDCPPENSYETGIMDITDGDPDCNLFFDTELMAEVCPPPTDSMINETPSINDDIFRGLQ
NDHDAYTTPIHREIVPPAEPARPASPKKRVTQECNTTDTPTTSIGSRSTVDSHRRRVLPA
TETPVVQQSLERYFTKKPVEPVEQPPVDDEVLFVSATAGRRQKANDVQIKSEPEPKQDVF
VTPEYVPKPVTVVTNQNQPKYVAAPTGQYEPEPVVPEYVPEPVVAATSRAQYRPKSVANP
TPEYEPEPGPSKAPAKQWMVQKLEAKGPKFITNSDPNPNREPTVEELQYIVPHQPKFSVP
PAPTGENPDLELMKNEIDCRTRIPDLSWIAQKAIREEGQRAKRVERNNEKLQQQLQHYQT
TMPENQLILDYDTDSKTFIRVHPELVKTMKPHQREGVKFMYDCCYGGVSDVKNSNGSGCI
LAHCMGLGKTLQVIALMNTVVCYPKMKTKRIIVICPKSTVMNWAQEIQHWLGDIQSGVKL
KVFYLPDSSNIIKKMEVLRGFHSISGRMASVLLIGYEAFRSLVFYDASNRKGEKHSEGVR
TEVRRVLINPGADLVILDEGHIIKNRKSQTNLSVAEIATKRRIILTGTPIQNNLNEYYCM
VNFVKPAYLGSEKEFNEHYATPIKQGQHADSAVADVKYMKYRSYVLHKNLVNFVQRKEFD
VLRGFLPEKYEYVLYVPLTPVQEDLYEQYLKRNPLRQETGGAHLLEDYTFMRKIWTHPIV
LERAWETAMKKKYGVQERRRATRRAHGFDSSSDDDDDDDKDRTRAITNIWWKQIISADDL
ESLFPSNKMILLFEILRLCQERGEKCLIFSGYVMVLNMVEHFMKMIDEQGTNPKAALYGF
NKFRGPWRPGMDFYRIDGGTSKSTRHEMITKFNDPKNLVTRVFLISTKAGGQGINLVGAN
RVIILDTSWNPAVDQQGIFRIYRLGQQKPCYIYRLLAMHTMEEKVYSRAVTKQAMSHRVA
DKKQVDRNYSMADLEELYHFERVDMAARPNAAPAEDELLSNLLWNKHKLIFRYHTHETML
DNKTEQDLTEAEKKVAWAQFKSKHHTTGAVAGLGLDILGGGLGPTDSQLSDPDLDSQVLT
ELDLACAPNYEDDDVKPEQQGSLPPLALPVRQMAPPTPNNKATIFGDDPYNTSYGGGLSI
IEEQRQRLSLKPELGVKRAASQVTVSAAEVELLRELEENAVQKKVKGEDDHYEPPAKKKV
AARDVPVMDTIDLLNLSYEGDSEEPLEESREKQSSEMEVSIPPSVPVLKSDSGLSMIEYD
PVGSTQELASYAETTTTTMNSTVDQIVPPPPVSYEKFKASLVEDPSVTTSTTTASPAAVM
VVATCSSPAAVPAPRVIMTRSMKRAAVPLKAGDVPAIKAAKKIRGIDDGGSLSSVSYEEN
RCRALVPFTGPRFAMNTALKALLACALIRADLDNPCRALVPYVPRVSLLEVILAAAFSEQ
LSSTESDSEDDSSSSETASTSDSYPMGLLTQTSTLSWTAADLASLDEHISEYYSALSDLE
DEMDFTQHTLTDSQRAADQQARDEKEHAELMESLHETRQVVTADILQERCRAVVPYNPPV
SLWTAEEEQEEDEPKAVVFHASLAEALTSNNSCARGLKRKREKELPVSVDNVVWKKPRTS
KVYRAKRRSIAAAVIPIPTAIELPVEEPEPVTANTTLSWGDEEVDFVDWNISCGEIEERE
KERRLAEPAESSALVPYQPAPSKKVPQPRLVVMYGPIRSFWDPKLLSSPLLPLVNERKGQ
ILKAQHNKLFRFTPYDKRDRKWRKVEQVVTVEEENTCRSVVLYTGSCLQLPQDVTVRYWL
HPLLVGYLSFCRYAKQHSTMRETEAAINRGTKRKVDWESGGSMKRSRAVNSAP
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atggcctattccgacacggacgaatcgtccgtcggaatcagctcccggtcgggcagctgg
caaatcgattccggctcgtcggattacgaggggggcgtagcgccagctgtccccaaggtt
ccggctgtcgttggggggcgtaggcggaacccccgccggagggcagcaaaggaggcgggc
agctttcgggctccttccgagctgcgctcggatgattcgttgaaggtggggaagaaaaag
aagaagaagggcgtagcgccagttccgaaggtcgttctgccagccggagagcgaaagcgc
aacactcgcaagaagcctcaggctgctgcgattgagcgatctagtgaggtcagtggggag
gaagatgaggaggagggtgaagattcggttgcccagatgcgggccatgttgcgacttccg
acggtgctgatccaggtgcgcaagtacgggatggatatcgtggacatttgcgaccagatg
gaaaacttgttgcttgacgaggggaataacgacgagatgagtcgacttaagcagaagctg
aacaagttgagcgaaaagtgctaccaaaaggtgcgagcagagtttgactgcgaaaatttt
aaggaacccaagccgagattgtctcgtcgggacaaacacaagccaaaaccggtcatcgag
tcggacgatgactccccgatgcgtccccggcgtttggctcgatccgacagtgttgattac
acgtcgccggacagaactggcgattcgacgcagcaacagccggacgattcacacaaacgg
gatgaatctgccaaagacagtggcaatccgtcctctggtcaggatgaatcgccgtcgaag
aatgacacggacgttgaacccaatgccccgtctgttgacgagcccgaagacatggaaccg
attcgggactgtccacccgagaacagctacgaaactggcatcatggacattacggacggc
gatccggattgcaatctgttcttcgacacggagctgatggccgaagtttgtccaccgcca
accgacagtatgatcaacgagacaccttcaataaatgatgacattttccgcggactgcaa
aatgatcacgacgcgtacacgacaccgattcaccgggagattgtaccgccggcggaaccg
gctcgaccggcgtcacccaaaaagcgggttacgcaggagtgcaacaccacggacacgcca
accaccagcatcggttcgcgatctacggtcgattctcatcgtagacgggttctcccggcg
accgagactccggtggttcagcaatcgctcgagcggtactttaccaagaaacctgttgag
ccagttgagcaaccccccgtagatgacgaagtcctgtttgtcagtgccacggcaggccgt
cgtcagaaagctaatgacgttcagatcaaatcggaacccgagccaaagcaggacgtcttc
gtaactcctgaatatgtacccaagccggtcacggttgtaaccaatcagaatcaacccaag
tatgtcgccgcaccaaccggccaatatgaacccgagccggtcgtcccagaatatgtcccc
gagccggtcgttgctgcaacctcacgtgcacagtatcgacccaagtcggtcgccaatcca
actcccgaatatgaacccgagcccggaccgtcaaaagctccagctaagcagtggatggtg
caaaaactggaggccaaaggacccaagttcatcaccaactccgatcccaacccaaaccgc
gaacctacggttgaagagctccagtacatcgtgccacatcagcccaagttcagcgtgccg
ccagcgcctacaggagaaaatcccgacctggagctaatgaagaacgaaatcgattgccgt
acgcgcatcccagatctctcctggatcgcccagaaagccattcgtgaggagggtcaacgc
gccaaacgggtcgagcggaacaacgagaagctgcaacagcagctgcagcattaccagacc
acaatgccggagaatcagctgatcctggattacgacaccgacagcaagaccttcatccgg
gtgcacccggaactggtcaagacaatgaaacctcaccaacgcgagggcgtcaagttcatg
tacgactgctgttacggcggggtttcggacgtcaagaactccaacggatccgggtgcatt
ctggcgcactgcatgggcctcggcaaaacgctgcaggtgattgcccttatgaacacggtc
gtgtgctacccgaagatgaaaaccaagcgaatcatcgtgatctgtccgaagagcaccgtc
atgaactgggcccaggagattcagcactggctgggcgacatccagagtggggtgaagctg
aaggtgttctacctgccggatagctccaacatcataaagaagatggaggttcttcgcggc
ttccactccatatccggtcgcatggccagcgtgctgctgatcggctatgaagcgttccgt
tcgttggtgttctacgacgctagcaaccgtaagggcgagaaacattccgagggtgtacgc
actgaggtacgccgcgtcctcatcaatccgggagcagatctcgtgattctggacgagggt
cacatcatcaagaaccgcaagtcgcagacgaacctgtcggtggcagagattgccaccaag
cgtcggatcatcctgacgggcactcccatccagaacaacctgaacgagtactactgcatg
gtgaacttcgtgaagccggcctacctcggaagcgagaaggaattcaacgaacactacgcg
actccgatcaaacagggacaacacgcggactctgccgtggcggacgtcaaatacatgaag
tatcgatcttacgttctgcacaaaaacctggtcaactttgtccagcgcaaagagtttgat
gtgctgcgcggctttctgcccgaaaagtatgagtacgtgttgtacgtaccgctcacccca
gttcaagaagatctgtacgagcagtacctgaagcggaatccgctgcggcaggaaacggga
ggcgcacatttgctggaggattacaccttcatgcgcaagatttggacgcacccgatcgtg
ctcgagcgggcttgggaaacggcaatgaagaaaaagtacggagttcaagagcgtcgccgg
gcaactcgtcgagcgcacggcttcgacagcagctcggatgatgacgatgacgacgacaaa
gaccgaacgcgcgccatcacaaacatctggtggaagcagatcatcagcgccgacgacctg
gaatcgctcttcccgagcaacaagatgattctgctgtttgaaatcctacggctgtgccag
gaacgtggcgaaaagtgtctgatcttctccggctacgtaatggtgctgaacatggtcgag
cactttatgaagatgatcgacgagcagggcacgaatccgaaggcggccctgtacgggttc
aacaagttccgcggcccgtggcgtccgggcatggacttttaccgcatcgacggcggaacg
tccaagtcaacgcggcacgaaatgatcaccaagttcaacgatccgaagaacctcgtgacg
cgcgtctttctcatctcgaccaaggccggcggccagggcattaacctggtgggagcgaat
cgagtcatcatcctggacacttcgtggaacccggccgtggatcagcagggcatcttccga
atctaccgactgggacagcagaaaccgtgctacatctaccggctgttggcgatgcacact
atggaggagaaggtgtactcgcgggccgttacgaaacaggcgatgagtcaccgggtggcg
gacaagaagcaggtcgaccgcaactacagcatggccgacctcgaggagttgtaccatttt
gagcgcgtcgacatggcggcccggccgaacgccgcccccgccgaggacgagctgctgtcc
aatttgctgtggaacaagcacaagcttatattccgataccacacgcacgagacgatgctg
gacaacaaaacggagcaggatctgaccgaggcggaaaagaaggtcgcctgggcccagttc
aagtcgaagcatcacacgacgggtgccgtcgcgggactcgggctggacattctgggtggt
ggactgggtccaaccgactcgcagctgtccgacccggacttggactcgcaggtgttgacc
gagctggacctggcatgcgctccaaactacgaggacgacgacgtcaagccggaacagcag
ggatcgctaccgccgttggcccttccggtgagacaaatggctccgccgacgccaaacaac
aaggcgaccatttttggcgatgatccgtacaacacgagctacggcggtgggttgagcatc
atcgaggagcagaggcaacggttgagtttgaagcccgaactgggggtgaagcgcgcggcc
tctcaggttacggtcagtgccgccgaggtggaactgttgcgcgagcttgaggagaatgct
gtccagaagaaggttaagggagaggatgatcattacgagccaccagccaagaagaaggtt
gccgcgcgggatgttccagtgatggacacgatcgacctgttgaacttgtcctacgagggc
gactcggaagagccgctcgaggagagtcgcgaaaagcagtcgtcagagatggaggtgtcg
attccaccgtcggttccagttttgaagagtgacagcggtttgtccatgatcgagtacgat
ccggttggaagcacgcaggagttggcgagctacgctgaaaccaccacgaccacaatgaac
tccaccgtagaccagatcgttccaccgccgccggtcagctacgaaaagttcaaggccagc
ctggtcgaagatccgtccgtgacgacgagcacaacgacggcgtcgccagctgcggtcatg
gtggtggccacctgcagctctcccgcggccgtgccagctccccgcgtgattatgacgcgc
agtatgaaacgagcggccgtgccgttgaaagcgggggatgttcccgcgattaaggcggcg
aagaagattcgtggcatcgacgatggtgggagcttgtcgagtgttagctatgaagaaaat
cgttgtcgagcgctggttcccttcaccggtcctcgcttcgcgatgaataccgcgttgaag
gccttgctggcatgtgcccttatccgtgctgacctagacaatccgtgccgagcgctggtt
ccgtacgtaccgagggtgtcccttttggaggtcatcctcgccgctgccttctcggagcaa
ctttcctccacggaaagcgattccgaagacgatagtagcagcagcgaaactgcgagcacc
tcggactcgtacccgatggggctgctgacccagacgtcgacgctgtcctggacggcggcc
gacctggcctcgctggatgagcacattagcgagtactactcggcgctgtcggatctggaa
gacgaaatggactttacccagcacacgctgaccgattcgcagcgcgcggccgaccagcag
gctcgcgacgaaaaggagcacgccgagttgatggagagtttgcacgagacgcgacaggtc
gtgaccgcggacatcctgcaagagcgctgccgtgccgttgttccgtacaatccaccggtt
tcgctgtggacagccgaagaggaacaggaagaagacgaaccgaaagccgtcgtatttcac
gccagcttggccgaagcgctgaccagcaacaacagctgcgctcgcggattgaagcgaaag
cgcgagaaggaacttccagtttctgtagataatgtcgtgtggaagaagcctcgaacgagc
aaggtctatcgcgccaaacggcgatccatcgccgcagcggttatcccaattccgaccgca
atcgaattacctgtcgaagagcctgaacctgtaactgcgaacacaacgctctcctgggga
gacgaagaggtggactttgtggattggaacatctcctgcggagaaatcgaagaacgtgaa
aaagagcgtcgactggcggagccagcagaatcttccgcgctcgttccgtaccaacctgcg
ccatcgaagaaggtgccgcagccacgcctggtcgtcatgtacggtccaatccgatcgttt
tgggatccaaaactgctctcgagtccgctgctcccgctcgtgaacgaacgcaagggacaa
atcttgaaggctcaacacaacaagctgttccgattcaccccctacgacaagcgcgatcgc
aagtggcgcaaagtcgagcaggtcgtcaccgtcgaggaagaaaacacctgccgatcggtg
gtgctctacactggtagctgccttcaattgccgcaagacgtaacggttcgctactggctg
catccgcttcttgtgggctatctgtccttttgccgttacgcgaagcagcactcgacgatg
cgtgagacggaggcggcgatcaaccgaggaacgaagcgaaaggtcgactgggaaagtgga
ggcagcatgaaacgttcacgcgcggtcaacagtgcgccgtaa
DBGET
integrated database retrieval system
