Culex pipiens pallens (northern house mosquito): 120420680
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Entry
120420680 CDS
T07310
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120420680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120420680
Spliceosome [BR:
cpii03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120420680
Complex C
U5 SnRNP specific factors
120420680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
120420680
NCBI-ProteinID:
XP_039439711
LinkDB
All DBs
Position
3:complement(24009255..24017734)
Genome browser
AA seq
2380 aa
AA seq
DB search
MAIPPYMIPPNQWAAHMMAQQQAFAVQQAQAQQQHAQHMHAQQLAATQMQIPPPMAPIPP
PGPPKPDPVLSQEKLMEKAQKWSQLQTKRFAEKRKFGFIDAQKEDMPPEHIRKIIRDHGD
MTSRKYRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVPVLYHITGAITFVNEIPWV
IEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIEL
DTEEDASVHDWFYEHRPLIGTPYVNGSTYRKWNLALPQMACLYRLANQLLTDLVDSNFFY
LFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDINKIIIRQPIRTEYRIAF
PYLYNNMPHFVHLSWYHMPNVVFIKTEDPDLPAFYFDPLINPIAHRHAVKSAEPLPEDDE
EFTLPEEVQPFLQDTPLYTDNTANGISLLWAPRPFNMRSGRCRRAIDIPLVKGWYKEHCP
PGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKATKFFQTTTLDWVEAGLQV
CRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKL
IIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRF
NTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQR
VESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIE
NMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLK
DGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRL
NQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKETGIEFMDLYSHLIPVYDVEPLEK
ITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLVYKWCQGINNLQDVWDVSEGECNVL
LESRYEKLYEKIDLTLLNRLLRLIVDHNIADYMSAKNNVVINYKDMNHSNSYGIIRGLQF
ASFIAQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVATETTHPIRLYCRYVDRIH
IYFRFTAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWD
IKNRLPRSVTTVQWDNTFVSVYSKDNPNLLFNMCGFECRILPKCRTQNEEFTHRDGVWNL
QNEVTKERTAQCFLRVDDESLSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRE
AVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIP
QSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
NAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWT
HQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYK
KLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQI
FRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFPAYK
WNVSRPSLLADTKDTMDNTTTQKYWLDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYP
SPTGVLIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSS
EPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQ
LFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHL
LDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRL
ILILRALHVNTERTKVILKPDKTTITEAHHIWPTLTDEEWIKVEVQLKDLILADYGKKNN
VNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTTNKHGDEIIT
STTSNYETTTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFVT
ISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQQINLPNSLPSHQYLKDMEPLG
WIHTQPNELPQLSPQDITTHAKVMSENPTWDGEKTIIITCSFTPGSCSLTAYKLTPSGYE
WGHKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQASWNYNFMGVRHDPNMKYEL
QLANPKEFYHEVHRPSHFLLFSSLEEGGDGNGADREDLFA
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccaccgtacatgattccgccgaaccagtgggccgcccacatgatggcccag
cagcaggcgtttgcggtccagcaggcccaggcgcagcagcagcacgctcagcacatgcac
gcccagcagctggccgcgacgcagatgcagattccgccgccgatggcaccgattccgccg
ccgggtccgcccaagccggatccggtgctgtcgcaggagaagttgatggagaaggcgcaa
aagtggtcacagctgcagacgaagcggtttgcggagaagcggaagtttggctttattgac
gcgcagaaggaggacatgccgccggagcacatccggaagattatacgggatcatggggac
atgaccagtaggaagtatcgtcatgataagcgtgtttatttgggtgcgctcaagtacatg
ccacatgcggttatgaaactgctggagaatatgcccatgccgtgggagcagattcgggac
gttccggttctgtatcatattacgggggcgattacgtttgtgaacgagattccgtgggtt
attgagccggtttacattgcccagtggggcacgatgtggatcatgatgcgtcgtgagaag
cgcgatcgtcgtcactttaagcggatgcggttcccgccctttgacgatgaagaacctccg
ctggattacgccgacaacgtgctggacgtggaaccgctggaggcgatccagatcgagctg
gacaccgaggaggacgccagcgtgcacgattggttctacgagcaccgtccgttgattggg
acgccgtacgtgaacgggtcgacgtatcgcaagtggaacctggccctgccacagatggcc
tgtttgtaccgcttggccaaccagctgctgaccgatctggtcgacagcaacttcttctac
ctgttcgacccgaagagcttcttcaccgccaaggcactcaacatggccatcccgggagga
ccgaagttcgaaccgctcatcaaggatcacaacgtcggggacgaggactggaacgagttc
aacgacatcaacaagatcataatccggcagccaatccgtaccgaataccggattgcgttc
ccgtatctgtacaacaacatgccgcactttgtgcacctctcatggtaccacatgccgaac
gtggtgttcatcaagacggaagatccggacctgccggcgttctacttcgatccgctgatc
aatccgatcgcgcaccgtcacgcggtcaagtcggcggagccgctgccggaggacgacgag
gagttcaccctgccggaagaggtgcaacccttcctgcaggacaccccactctacacggac
aacacggctaacgggatctcgctgctgtgggcgccgcggccgttcaacatgcgctctggg
cggtgccgccgggcgatcgatatcccgctcgtcaagggctggtacaaggagcactgcccg
ccgggacatccggtcaaggtgcgcgtgagctaccaaaagctgctcaagtattacgtgctg
aacgcgctcaagcaccgcaagccgaagccgcagaagaagcgctacctgttccggtcgttc
aaggcgaccaagttcttccagacgacgacgctggactgggtggaggccgggctgcaggtc
tgccgccagggctacaacatgctgaacctgttgattcaccggaagaacctgaactatctg
cacttggattacaacttcaacttgaagcccgtcaagacgctaaccacgaaggagcgtaaa
aagtcccggttcggaaatgcgttccacttgtgtcgggagattctgcgcttgaccaagctg
atcatcgactcgcacgtgcagtaccggttgaacaacgtggacgcgttccagctggcggac
ggtctgcagtacatctttgcccacgtcggccagctgaccggaatgtaccgctacaagtac
aagctgatgaggcagattcggatgtgcaaggatttgaagcacttgatctactaccgcttc
aacaccggcccggtcggaaaaggtcccggctgtggcttctgggcgccgggttggcgcgtg
tggctattcttcatgcgcggaatcacacccctgttggaacgctggctgggcaacttgctc
tctcgtcaattcgagggtcgtcactcgaagggcgtcgccaagacggtcaccaaacagcgc
gtcgagtctcactttgatctggaactgcgcgcctccgtcatgcacgacatcgtggacatg
atgcccgagggaatcaaacagaacaaggcccgtaccatcctccagcacctctccgaagcg
tggcgctgctggaaggccaacatcccctggaaggtacccggtctccccatccccatcgaa
aacatgatcctgcgttacgtcaagatgaaagccgactggtggaccaacaccgcccactac
aaccgggaacgtatccggcgtggcgccaccgtagacaaaaccgtctgcaaaaagaacctc
ggccgactcacgcgtctctaccttaaagccgaacaggaacgccaacacaactaccttaaa
gacggcccgtacatctcccccgaggaagccgtcgccatctacaccacgaccgtgcactgg
ctcgagtcccgccggttcgccccaatccccttccccccactctcctacaaacacgacaca
aaactgctcatcctagccctagaacgtctaaaagaagcgtacagcgtcaaatctcgcctc
aaccagagccagcgcgaagaactgggcctgatcgagcaagcgtacgacaacccgcacgag
gcgctgtcccgaatcaagcgtcacctgctgacgcagcgagcgttcaaagagacgggaatc
gagttcatggacctgtacagccacctcatcccggtgtacgacgtggaaccgctggagaag
attacggacgcgtacctcgaccagtacctgtggtacgaggcggacaagcggcgcctgttc
ccgccgtggattaagccgagcgacacggagccgccgccgctgctcgtgtacaagtggtgt
caaggcatcaacaacctgcaggacgtgtgggacgtatcggagggcgagtgcaacgtcctg
ctggaatcccgctacgagaagctgtacgaaaagatcgatcttacgctgctcaatcgtctc
cttcgtctgatcgtcgaccacaacattgccgattacatgtccgccaagaacaacgttgtc
ataaactacaaggacatgaaccactccaacagttacggaatcatccgcgggctgcagttt
gcctcgtttatcgcccagtactacgggctggtgttggatctgctggtgctgggtttgcag
cgggccagcgaaatggccggaccaccgcagatgccgaacgatttcctcaccttccaggac
gtcgcaacggagacgacgcatccgattcggctgtactgtcggtacgtggaccggattcac
atctatttccgcttcacggcggaggaggcgcgtgacttgatccagcgctatctgacggaa
catccggatccgaacaacgagaacattgtcgggtacaataataagaagtgctggccgcgg
gatgcccggatgcggttgatgaagcatgacgtcaatctggggagggccgtgttttgggac
attaagaacaggctgccgcgttcggtgacgacggtgcagtgggacaacacgttcgtgtcg
gtttactccaaggacaatccgaatctgctgtttaacatgtgcgggtttgagtgcaggatt
ctgcccaagtgtcgcacccagaacgaagagttcacccaccgggacggcgtgtggaatctg
cagaacgaagtcacgaaggagcgtacggcgcagtgtttcctgcgcgtggacgacgagtcc
ctctcgcggttccacaaccgcgtgcggcagattttgatggcttccgggtcgaccaccttc
accaagatcgtcaacaagtggaacacggcgctgatcgggctgatgacgtacttccgcgag
gcggtcgtaaacacgcaggagctgctggatctgctggtcaagtgcgagaacaaaattcag
acgcgtatcaagatcgggctgaactcgaagatgccttcgcgtttcccgccggtggtgttt
tacacgccgaaggagctgggcgggttgggaatgttgagcatgggtcacgtgttgattccg
cagtcggatctgcgctggtcgaagcaaacggacgtcgggattacgcacttccggtccggt
atgtcgcacgacgaggatcagctgattccgaacttgtaccggtacattcaaccgtgggag
agcgagtttatcgactcgcagcgagtttgggcggagtacgcgttgaagcggcaggaagcg
aacgcgcagaaccggcggttgacgctggaggatttggaggacagctgggatcggggcatt
ccgcggattaacacgctgttccagaaggatcgtcacacgctggcgtacgacaaaggttgg
agaatccggacggagtttaagcagtaccaggtgctgaagcagaatccgttctggtggaca
catcagcgccacgacggcaagttgtggaacttgaacaactaccgtacggacatgattcag
gcgttgggtggagttgagggcattctcgagcatacgctgttcaagggaacgtacttcccc
acctgggaaggtttgttctgggagaaggcatccgggttcgaagagtcgatgaagtacaag
aagctgaccaacgcgcagcgttccggtttgaaccagattccgaaccgtcgcttcacgctc
tggtggtctccgacgatcaaccgtgccaacgtgtacgtcggtttccaggtgcagctcgat
ctgaccggtattttcatgcacggtaagattccgacgctgaagatttcgctcatccagatc
ttccgtgcccatttgtggcaaaagattcacgagtcgatcgtgatggatctgtgccaggtg
tttgatcaggaactggacgcgctggaaattgaaaccgtgcaaaaggaaacgatccaccct
aggaagtcgtacaagatgaactcgtcctgcgcggacatcctgctcttcccggcttacaag
tggaacgtctcaagaccttcccttctggcggacacaaaagacacgatggacaacaccaca
acgcaaaagtactggctggacgtccagcttcgttggggagattacgactcgcacgacgtc
gaacgttacgcccgagcgaagttcctcgattacacaacggacaacatgtcgatctacccg
tcgccaacgggcgtcctgatcgcgatcgatcttgcttacaaccttcacagcgcctacggc
aactggttccccggctgcaaaccgctcatccaacaggccatggccaagatcatgaaggcc
aacccggctttgtacgtgttgcgcgagcgtatccgcaaggctctccagctgtacagttcg
gaacccacggaaccgtatctctcgtctcaaaactacggagaactgttctccaaccagatc
atctggttcgtggacgacaccaacgtgtaccgcgtgacgatccacaagacgttcgagggt
aacttgacgactaagcccattaacggagcgattttcatcttcaatccgcgcacgggccag
ctcttcctgaagatcattcacacctcggtgtgggccggtcagaagcgtctcggccagctg
gccaagtggaagacggccgaagaagtggccgcgctgattcgatcgcttccggtggaggaa
caacccaagcagattatcgtcacccgaaagggcatgttggatccgctggaggtgcacttg
ttggatttccccaacattgtcattaaggggtcggaactgcagctgcccttccaggcttgc
ctgaaggtggagaagtttggtgatttgattctgaaggccaccgaaccgcagatggttctg
ttcaacctgtacgacgactggctgaagaccatttcttcgtacacggcgttctcgcgtttg
attttgatcctgcgcgcgctgcacgtcaacaccgagcgaaccaaggtcatcctgaaaccg
gacaagaccaccataaccgaagcccatcacatctggccgacgctgaccgacgaggagtgg
atcaaggttgaggttcagctcaaggatttgattctggcggattacggcaagaagaacaac
gtcaacgttgcctcgctcacgcagtcggaaattcgtgacatcatcctgggtatggaaatc
tccgcaccgtccgcccagcgtcaacagattgccgaaatcgagaagcaaaccaaggagcag
agccagctgacggcgaccacgacgcgaaccacgaacaaacacggagacgaaattatcacc
tctaccacgagcaactacgaaacgaccacgttcagctcgaagacggagtggcgcgtgcgt
gccatttcggcgaccaacctgcacctccgtacgaaccacatctacgtcagctcggacgac
atcaaggaaaccggctacacgtacattctcccgaagaacatcctgaagaagtttgtcacg
atcagcgatttgcgtgcccaaatcgccggctatctgtacggcgtcagcccgccggataac
ccacaggtcaaggagatccgctgtatcgtaatgccaccccagtggggaacccaccagcag
atcaacctgcccaactcgctcccatcccatcaatacctcaaagacatggaaccgctcggc
tggatccacacccaaccgaacgagttgccccaactctcgccccaggacattaccacccac
gccaaggtcatgtccgagaaccccacctgggacggtgaaaagaccatcatcatcacgtgc
tccttcacgcccgggtcctgctcgctcaccgcctacaaactcaccccgtccggctacgag
tggggccacaaaaacaccgacaagggcaacaacccgaagggctacctgccgtcgcactac
gagcgcgtccagatgctgctgtcgaacaagttcctcggcttcttcatggtgccggcgcag
gccagctggaattacaactttatgggcgtgcgccacgatccgaacatgaagtacgagctg
cagctggccaatccgaaggagttttaccacgaggtgcaccggccgtcgcactttttgctc
ttttccagcctggaggagggcggcgacgggaacggcgccgatcgggaggatttgttcgcg
taa
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integrated database retrieval system
