KEGG   Culex pipiens pallens (northern house mosquito): 120420793
Entry
120420793         CDS       T07310                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03013  Nucleocytoplasmic transport
cpii03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120420793
  09122 Translation
   03013 Nucleocytoplasmic transport
    120420793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpii03019]
    120420793
   03041 Spliceosome [BR:cpii03041]
    120420793
Messenger RNA biogenesis [BR:cpii03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     120420793
Spliceosome [BR:cpii03041]
 Complex C
  Other components
   EJC/TREX
    120420793
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    120420793
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N Beta-prop_Vps41 eIF2A Tricorn_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st PAC11 RMC1_N CFAP251_N NBCH_WD40 DSE1_N Beta-prop_TEP1_C WDR90_beta-prop_4th TRM82_WD PD40 Beta-prop_SCAP Peptidase_S9_N Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_ELP1_1st KNTC1_N
Other DBs
NCBI-GeneID: 120420793
NCBI-ProteinID: XP_039439840
LinkDB
Position
1:complement(136206530..136207741)
AA seq 322 aa
MVSPKTQVEELQEYFKTHNKTREATKAHSAKVHSVGWNCDGKRLASGSFDKSVVIFTLDR
ERLNKESTYRGHTGSVDQLCWHASMPDLLSTASGDKTVRIWDARVGKCATIINTKGENIN
ITWSPDGNTIAVGNKEDLVTFIDARMHKILAEEQFSFEVNEIAWSNGSDLFFLTNGQGCV
HILNYPDLNLQQVLKAHPSTCICIEFDPTGKYFATGSADALVSLWDAEELACLRVFSRLD
WPVRTISFSHDGKLLASASEDLIIDIGDTETGEKVADISVDAATFTVAWHPKQYILAYAC
DDKDANDRRRDAGSLKVWGFTE
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtctcgccgaaaacgcaggtcgaggagctgcaggagtacttcaagacgcacaacaaa
acgcgcgaagccaccaaagcacacagcgccaaggttcactccgtcggctggaactgcgac
gggaagcggcttgcgtccggttccttcgacaagtcggtggtcattttcacgctggaccgg
gagcggttgaacaaggagagcacgtaccgtggccacaccggttccgtggatcagctgtgc
tggcacgcgtccatgccggacctgctgagtacggccagcggggacaagacggttcggata
tgggacgcccgcgtgggcaaatgtgccaccatcatcaacaccaagggggagaacattaac
ataacttggtctccggacgggaacacgattgccgtgggcaacaaggaagatctggtgaca
ttcatcgacgcccggatgcacaagattctggccgaggagcagttttcgttcgaggtcaat
gagatcgcctggagcaacgggagcgatctgttcttcctgacgaatggccaaggttgcgtg
cacatattgaactacccggatctgaacctgcaacaggtgctgaaggcccatccgagcacg
tgcatctgcattgagttcgacccaacggggaagtactttgccacgggttcggctgacgcc
ttggtgtccctctgggacgccgaagagttggcctgcctgcgagtgttctccagactggac
tggcccgttcgaaccatttcgttcagccacgacggaaagctgcttgcatcggccagcgaa
gatctgatcatcgacattggagacacggagacgggcgaaaaggtggcggacatttccgtt
gacgccgccaccttcaccgtcgcctggcacccgaagcagtacatcttggcgtacgcttgt
gacgacaaagacgccaacgatcgacgccgggacgcgggcagcttgaaagtgtggggcttc
accgagtaa

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