Culex pipiens pallens (northern house mosquito): 120421382
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Entry
120421382 CDS
T07310
Name
(RefSeq) helicase domino isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120421382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpii03036
]
120421382
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
120421382
SWR1 complex
120421382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
120421382
NCBI-ProteinID:
XP_052567114
LinkDB
All DBs
Position
3:complement(98968302..98986583)
Genome browser
AA seq
2101 aa
AA seq
DB search
MELWSLMHFLMPHVFQSHREFKEWFSNPMTGMIEGNSEYNETIIKRLHKVLRPFLLRRLK
SEVEKQMPKKYEHVVMCRLSKRQRFLYDDFMSRAKTRETLASGNLLSVINVLMQLRKVCN
HPNMFEERPTISPFRMDGISFQTASLVYNMLNYDPFTQIDLSSLNLALARLELTLSAYVA
YRSQRLCLPRRLIEEIDATPEPAPRCPTGRLKLHVRVPNARVQETIGSTGGVRVGTSPAM
KTEGTRFVPLVNSSLIVDRKPLIEEISSRPVTTIPLDDPASASSSSSSSNVNLRKRCDIN
SGSSSSSSSISSTLSNRTSAGHVAQIVHTSAGRQLILTPSASGGQVMSTLMTASGQRLTV
VNRSPAAPPQRTLSEPAAPACNPISSTLAASIVQQLKQHHSYSANLTPEELEQKARTEFY
LASVEESRKDRRGQILELLGRMNQKRCDATPIYGEDLRDSICRLGEEPFSDSVPITVRGA
YECRQVWRAPSCWSLPNACKSIERRAHEFRAVFANFVCYVPAVCAPAPKLHVSHPSPSRS
NAEQDKDTRITDGLRPALRILHPIISAMSTLFPDPRLIQYDCGKLQTLDRLLKELKSGGH
RVLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQLLMERFNGDKRMFVFILSTRS
GGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSEKTIEENILKKA
NQKRMLGDLAIEGGNFTTAFFKSSTIQDLFSVDNVEEDASARLAEVIERDRERKERLQQS
MITPSSSSAAATPAAVEESKSAINVFESALAAAEDDQDVQAAKLARAEASAELEEFDENI
PIDQVAATADSKEKEPELSKAEKEVQNLIKQLNPIERYAMRFVEETEGTWTAVQLAAVEA
EIEQQKRDWEANRLAQQKREEEAARQQTAEENDLLTFSREDATNQIWISDNTMEKMPMWC
PPTPPQDDNDIYVDYSLGFLYETEVIPEAQLPPVYVKKEYKRSRSEAGFYPDGRRPVKIR
KEDNYYAPRSLFDRPSPQIAKLRKDYKMQRYKGIIKPFPMAGLKPTMPVKQLVEPEGMPE
WMIHEDMSMLNVIQNLQGLPLNLMLVSPGHTPNWDLVADIVNQCSRTYRLPKQCRYRYEA
VVIPREEGKLLESPKKQKKSKNPLKQSPPKGIRAMRTAQLYTGDQNNSYIKLARQKFDNI
KLAFSKKAPQAKQLLANPPLKNPKHAAVLAEYGITSYDAPLTPVEIATRRAERISKEKQK
NASLTQAQEQMALQQQQQQQAQQQAAAAAAAAQQVAAAAQQAAAAAAVAQQQQQQAQAQA
QQQAQQVQVAQPVQVEFTRKITAKDSTTATNGIFVLNRQVGGQPQAHVIQQQVQQQIQIQ
PHVQQHIATSVAAANQQQQQQVQQATIVVCGVATNTSPAVATLVQSPSMQAGRGQPVVNI
CPTPSQQQQIVKAIVASPANQNLLAQQLAVAQSNAQQHVSVVLTSPVTTMSANQVQLTQP
QIVSIHQSTPQIIQSSASVTQASGTLVQTLATQSLPQVVSVAQLATVGTVMTTGSPIQQP
QVATLTTSALRAQRIVAPPGTLQEVVLHQRSGSQSPTVVSVSGLGQGLTQAQLQAGQLRL
SMAGGQQVSGVVAKSISVGTVTSAGKPINTSQYIYRQPIRQQVKVLQSGTGQPGTTTVLQ
QAGGQQTLVSPAIIQGNIIQTGTVGQTVQVQQVTQKVSVATVSSSSAATISSQAGTIATV
QVAPGQQRAQFIKQVGTKQITTRQVTENEMQLMVKRQIISQQHKQQLLPQTQIFAPANLQ
VQQAGTSGQQIATLVKTSSGTAVAATGMTLSQVKPGQIKTISNQSQVRHLQLQQQILAAQ
QRKGGGKMTQITQMAGKAGQPTQLFVQGPKNLPAGTVTVQQIIRHAQPNSLTAGGQIVLG
KSRVIPVSVSQQGNQRQTIQVVTATSAAQAIAASNMRTHVPSSNTVVNTIKVAAGATPAQ
QQQAILTALQNQQNQQRANASPVRLQTSSGSLVAVTVQQPQSVASAANQQQQQQQDQITS
VTVAQGAAQLATSQQQVLQIQAQPQQIITSASDGTNSGIVQQQQQQQQVSMIKKKQSPSG
K
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtggtcgctgatgcacttcctgatgccgcacgtgttccagtcgcaccgcgag
ttcaaggagtggttctcgaacccgatgaccggtatgattgaaggcaactccgagtacaac
gagacaatcatcaagcgccttcataaggtcctccgcccgttcctgctgcgccggttaaag
tccgaggtggagaaacagatgccaaagaagtacgagcacgtcgtcatgtgccggctgtcc
aagcgacagcggtttctctatgacgattttatgagccgtgcaaaaacgagggaaacgctc
gcctcgggcaacctgctcagcgtgatcaacgtgttgatgcagctgcggaaggtttgcaac
cacccgaacatgttcgaggagcgtccgacgatctcgccgttccggatggacggaatcagc
tttcagacggcttcgctcgtgtacaacatgctgaactacgatccgttcacgcaaattgac
ctgtcttccctgaacctggcgctggcccggctcgagctgacgctgtccgcgtacgtggcg
taccggtcgcagaggttgtgcctgccgcggcgtctgatcgaggagattgacgcgacgccc
gagccggcaccgcgctgtcccaccggaagactgaagctgcacgtgcgggtgccgaacgcg
cgcgtccaggaaacgatcggcagcaccggcggcgtacgggtgggcactagtccggccatg
aagactgaaggaacgcgttttgttccgcttgtaaattcttcactaatagtagataggaaa
ccgctgatcgaggagatcagctcacgcccagtaacaacgattccgttggacgatcccgcc
tcggcgtcgtcgtcgtcgtcgtcgtcgaatgtaaatttacgtaaaagatgtgatatcaat
agcggtagtagcagcagcagcagcagcattagtagtacacttagtaatagaacaagtgct
gggcacgtagcgcagattgtgcacacttccgccggcaggcagttgatcctcacgccgagc
gccagcggaggtcaagtgatgagcacgctgatgacggcgagcggtcaacggctaacggtt
gtaaaccggtcaccagccgcccctcctcaacgcacgctctcggaacccgctgccccagcc
tgcaatccgatctcttcaacgctggcggcttcgatcgttcagcaactcaagcaacaccat
tcctattcagcgaacctcaccccggaagaactggagcagaaggcacgcaccgagttctac
ctggccagtgtggaggaatcgcgaaaagaccgacgcggacagatcctcgaactgctcggc
cggatgaaccaaaagcgctgcgacgccactccaatctacggcgaagatctgcgcgattcc
atctgtcgactcggcgaggaaccattctccgactccgttcccataaccgtgcgcggcgcg
tacgagtgccggcaggtgtggcgcgcccccagctgctggagtctgcccaacgcgtgcaag
tcgatcgagcggagggcccacgaattccgcgccgtgttcgccaactttgtctgctatgta
cctgcggtttgtgctccggcacccaagctccacgtttcgcatccgagcccgtcgcgcagc
aacgccgaacaggacaaggacacgcggatcacggacgggctccggccggcactccgaatt
ctgcacccgatcatttcggccatgagcacgctgttccccgatccccggctcatccagtac
gactgcggcaagctgcaaacgctggaccgcctgcttaaagagctcaaatcgggtggccac
cgggtgctcatcttcacccaaatgacgcgcatgctggacgtcctggaggcgttcctcaac
taccacggccacatctacctgcggctggacggaacgaccaaggtcgagcagcggcaactc
ctcatggagcgcttcaacggcgacaaacgcatgtttgtgttcatcctctcgacccggtct
ggcggcgtcggcatcaacctgaccggggcggacaccgtcatcttctacgactccgactgg
aacccaaccatggacgcccaagcccaggaccggtgccaccggataggacaaacgcgcgac
gtacacatctaccgccttgtcagcgagaaaaccatcgaagaaaacatcctcaaaaaagcc
aaccaaaagcgaatgctcggcgatctggccatcgagggcggcaacttcaccacagccttc
ttcaaaagctccaccatccaggacctcttctcggtggacaacgtcgaggaggacgcgtcg
gcccggctagccgaggtcatcgagcgcgaccgcgaacgcaaggaacggctacagcagagc
atgatcacgccgagcagttccagcgcagccgccactccggccgccgtcgaagagagcaaa
tcggccatcaacgtgttcgagtcggcactggccgccgccgaggacgatcaggacgtgcag
gcggccaagctggcgcgggccgaagcgtctgccgagctggaagagtttgacgaaaacatt
ccgattgatcaggtggcggcgacggcggattcgaaggagaaggaacccgagctaagcaag
gccgaaaaggaggtgcagaatttgatcaagcagctcaaccccatcgagcggtacgcgatg
cgcttcgtcgaggagacggagggcacgtggacggcggtgcagttggccgccgtcgaggcg
gagatcgaacagcagaagcgcgactgggaggcgaaccggctggcgcagcagaagcgcgag
gaggaagcggcccgccagcagacggccgaggagaacgatctgttgacgttctcgcgcgag
gacgcgaccaaccagatttggatatcggataacacgatggaaaagatgccgatgtggtgc
cctccgacgccaccccaggacgacaacgacatctacgtggactactcgctcggttttctg
tacgagacggaagtcatcccggaggcgcaacttccgcccgtctacgtcaagaaggagtac
aagcgaagccgttccgaggccggcttctacccggacggacgccggccggtcaagatccgc
aaggaggacaattactacgcgccgcggtcactgttcgatcgtccttcgccgcagattgcc
aaactgcgcaaggattacaaaatgcagcgctacaagggcatcatcaagccgttcccgatg
gcgggcctgaagccgacgatgccggtcaagcaactggtcgagccggaaggaatgcccgag
tggatgatccacgaggacatgtcgatgctgaacgtgatccagaacctgcagggactgccg
ctgaacctgatgctggtgtcccccggccacacccccaactgggacctcgttgcggacatt
gtgaaccagtgctcgaggacgtaccgactgccgaaacagtgccggtatcggtacgaagcc
gtcgtaatcccacgcgaagaaggcaaactcctggaaagtcccaaaaagcagaaaaagagc
aaaaacccactcaaacagtccccaccgaaaggaatccgggcgatgcgaaccgcccaactc
tacaccggcgaccagaacaactcgtacatcaagctggcgcgacaaaagtttgacaacatc
aagctagcgttcagcaaaaaggcgccccaagcgaagcaactgcttgcgaatcccccactc
aagaaccccaaacatgctgccgtgctggccgagtacggaatcacaagctacgacgcaccc
ctgacaccggttgagattgccacgcgccgcgccgaacgaatctccaaggagaagcagaag
aacgcttcgttgacgcaagcccaagagcagatggcacttcagcaacagcagcagcaacag
gctcaacagcaagcagcagctgcagctgcggccgcccaacaagttgctgcggcggcccaa
caagccgcagcggccgccgctgtcgctcaacagcagcagcaacaggcccaagcgcaagcg
caacagcaagcacaacaggtacaagtggcccaaccggtgcaggtagagttcaccaggaag
ataaccgccaaagacagcacgacggcgactaatggcatctttgtactcaaccgacaggtt
ggtggccagcctcaagcgcatgttatccaacagcaggttcagcagcaaatacaaatccag
ccgcacgttcagcagcacattgcgacgtccgtcgctgccgctaaccagcagcagcagcag
caggtccaacaggccaccattgtggtgtgcggagtcgcgacaaacacttcccctgcggta
gccacgctcgttcagtcaccatcgatgcaggcgggtcgcggccaacccgtggtcaacatt
tgtccaactccgagccagcagcagcagattgtgaaggcaatcgtggcgagccccgccaac
cagaatctgctcgcacagcagttggcggtggcgcaaagcaacgcccagcagcacgtgtca
gttgtgttgacctctccggtgacgacaatgtccgccaaccaggtgcagctcactcagcct
cagatcgtgtccatccaccagtcgacgccacaaatcatccaaagcagtgcgtcggtcacg
caagcctcgggcacactcgtacagacgttggccacgcagtcgctgccgcaggtcgtgtcc
gttgcgcagttggccacggtcggcaccgtcatgaccaccggcagtccaatccaacagcct
caggtggccacactgacgacgtcggcactgagagcgcagcgcatcgtagctccacctggg
acgcttcaggaggtggttcttcaccaacgttccggttcgcaaagcccaacggtggtcagc
gtaagcggcttgggacaaggtttgacgcaagcacagctgcaagccggtcagctacggctt
tcgatggcgggtgggcagcaagtgtctggcgtcgtagccaaaagcatctccgtcggaacg
gtaacgagtgcaggaaagccaatcaacacttcgcagtacatctaccgtcaaccaatccga
cagcaggtcaaagtgcttcaatcgggcacggggcaacccggaacgacaacggttctgcag
caggctggcggacagcaaactttggtcagtcccgccatcatccagggcaacataatccaa
acgggaaccgtcggtcagaccgtccaggtgcaacaggtcacgcagaaggtgtccgtagct
acggtcagctcctcgtctgcagcgaccatttccagtcaagccggcacgattgccactgtt
caggtggcgcctggccaacagagagctcagttcatcaaacaggtcggaacgaagcaaatc
accacgcgacaggtgactgaaaacgaaatgcaactcatggtcaaacgacagatcataagt
caacagcacaaacagcaactgctgccccaaacacaaatcttcgccccggcaaacctgcaa
gtccaacaggctggcacttccggtcaacagattgcgacgttggtgaagacctccagcgga
acggcagtggccgcaaccggaatgacgctgtcgcaggtgaaacccggccagatcaaaaca
atcagcaatcagagccaagttcgccacctgcagcttcagcagcaaatcttggcagcccag
caacgcaagggaggcggcaaaatgacccaaatcacccagatggccggcaaggcaggtcaa
ccgacgcaactgtttgtgcaaggcccgaaaaatctgcccgccggtacggtcaccgtgcag
cagattattcggcacgcccagcccaactcgctgaccgctggcggtcaaattgtgctgggt
aaaagccgggtcatcccggtgtccgtttcgcagcagggcaaccagcggcaaacgattcaa
gttgtaacggccacttcggccgcccaagccattgccgccagcaacatgcgaacgcacgtg
ccgtcgtcgaacaccgtcgtcaacacgatcaaggtcgctgccggcgccactccggcccaa
cagcagcaagcgatcctgacggccctccagaaccagcaaaaccaacaacgggcaaacgcc
agtcccgttcgactgcaaacctccagcggatcgctcgtggccgtcacggtgcagcagccc
cagtcggtggcctcggcggcaaaccaacagcagcagcagcaacaggaccaaattacgtcg
gttacggttgctcaaggggcagctcagctggccaccagtcagcagcaggtgctgcaaatc
caagcccaaccgcagcagattataacgtcggcaagcgacggaaccaattctgggatagtg
cagcaacaacagcagcagcaacaagttagtatgattaaaaagaaacaatctcctagcgga
aagtag
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integrated database retrieval system
