Culex pipiens pallens (northern house mosquito): 120421530
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Entry
120421530 CDS
T07310
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpii03036
]
120421530
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120421530
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
120421530
NCBI-ProteinID:
XP_039440684
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All DBs
Position
3:45831067..45845803
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AA seq
1170 aa
AA seq
DB search
MHRRGGKRIRMDEPPPDFDEPIEPPYHSEPHNESWSSGGAGEGPSEEHHPEEGGSAVAVA
AGPQPTGGGRVGRMTRLRARGGVPLKAPIIDEDDDDIFFGAGRFEQRQELQKKRKAPRKA
RGEGGTPKEPKEKRVYHEADDRVVVTDRESTMDENSLYYILRHSKSAITGIVDDWIESYK
LDKDSALIALMNFFVHASGCKGKITAEMQQTMEHTAIIRKMTEEFDEDSHEYPLIMPGQQ
WKKFKMNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSDSQVRAFRHTATLAAMKLM
TALVDVALLVSVNFDNAARQYDAERLKPRDKRAPDRLESLMAKRTELEENMDEIKNMLTY
MFKSVFVHRYRDTLPEIRAICMSEIGIWMQKFSQNFLDDSYLKYIGWTLHDKVGEVRLRC
LQALLPLYENEELKGKLELFTSKFKDRIVAMTLDKEFEAAVHAVKLVINILKIHQDILTD
KDCEIVYELVYSSHRGVAQAAAEFLNVRLFCLDADAQVTYTKRGKKRLANTPLIRDLVQF
FIESELHEHGAYLVDSFIDSNPMVKDWECMTDLLLEEPGPAEETLDNKQESTLIEIMVSA
VRQAATGEPPVGRGSSRKMTLSAKEIKQVQDDKQKLTEHFIQTLPLLLNKYSADSEKLTN
LLAIPQYFDLELYTTTRQEANLQALLDKMTHIMSIHVDREVLETCSKTFEFLCTEGSAIY
TRCDVARSNVIDECVNRYKEAIDDYRNLIAGEETPNEDEIYNVNISLKKVSILYSCHNLN
PWNLFDSLYQDIEESLSENAGDNGIPHEALVYCIEACFFSINWGLYFLENTMDRSAAAEV
DELSTNLNKYLNACNELMHYEVAPTVQEAAYMSICDLVVVFSDQLATHQNESIRKLVFVP
SAEQQGLLNEFVQANVFSTEQEEGHDETRIEELHKRRNFLAAYCKLIVYNILPMKSAADI
FKHYLRCYNEYGDIIKTTLGKTREINKVNCAMTMCLSLINIFKDIQDASPGGRVSRNSQE
FADLKELAKRFALSFGLDAVKNREAITVFHRAGILFAVTVPADGYEDPSAPPPCIAFLEA
LAELTNKLIKQDKKLILSFLERRLNAGIPSSRSEDWQPLMAYKNSLLHGETDQLPPATAA
KRAYSRKKKDYDREDDEEEHDDEDDADYVA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtcgcggaggaaaacgcatccggatggacgaaccgcccccggatttcgacgaa
ccgatcgagccaccgtaccacagtgagccccacaacgagagttggtcttccggcggagcc
ggagagggtccatcggaggaacatcacccggaggagggtggttccgctgttgctgttgca
gctggtccgcaaccgacggggggtggccgcgtcggtcgtatgactcggctgagggcgcgg
ggtggagttccgttgaaggcgccgatcatcgacgaggacgatgacgatatctttttcggg
gcggggaggttcgagcagcggcaggagttgcagaagaagaggaaggcgccgcggaaggca
cgcggggagggaggcacgccgaaggagcccaaggagaagcgggtttatcacgaggcggat
gatcgggtcgtggtgacggaccgggagagcaccatggacgagaacagtttgtactacatt
ttgaggcattccaagtcggcgattacgggcattgtggacgattggatcgagagttacaag
ctggacaaggattcggcgctgattgcgttgatgaactttttcgtgcacgcgagcggttgc
aaagggaagattacggcggagatgcagcagaccatggagcacacggcgatcatccggaag
atgacggaggagttcgatgaggacagccacgaatatccgctgattatgcctgggcagcag
tggaagaagttcaagatgaatttctgtgactttgtgcagacgctggtgaagcagtgccag
tactcgatcatctacgaccagttcctgatggacaacgtcatctcactgctgaccggtctg
tccgattcgcaggttcgtgcgttccgtcacacggccaccctcgccgcgatgaagctgatg
accgccctcgtggacgttgcgctgctcgtgtcggtcaactttgacaacgccgcccgccag
tacgacgccgaacggttgaagccccgtgacaagcgagccccggaccgcctggaatcccta
atggccaagcgaaccgagctggaggagaacatggacgaaatcaagaacatgctcacgtac
atgttcaagtcggtgtttgtgcaccgctatcgggacacgctgccggagattcgcgccatc
tgcatgtcggagatcggcatttggatgcagaagttttcgcagaacttcctggacgattcg
tacctcaagtacatcggctggacgctgcacgacaaggtcggtgaggtgcggctgcgctgt
ctgcaggcgctgctgccgctgtacgagaacgaggagttgaagggcaagctggagctgttt
acgtccaagtttaaggaccgcatcgtggcgatgacgctggacaaggagttcgaggcggcc
gtgcacgcggtcaagctggtgattaacattttgaaaattcaccaggacatcctgacggac
aaggactgcgaaatcgtgtacgagttggtgtactcgtcgcaccgtggagtcgcgcaggcc
gccgccgagttcctgaacgtgcgcctgttctgtctagacgccgacgcccaggtgacgtac
acgaagcgcggcaagaagcggctcgccaacaccccgctgatccgggatctggtgcagttc
ttcatcgagtcggaactgcacgaacacggagcgtatttggtcgattcgttcatcgacagc
aaccccatggtcaaggactgggagtgtatgacggatttgctgctggaggaaccagggccg
gcggaagaaaccctggacaacaagcaggaatcgacgctgatcgagattatggttagtgcg
gtgcggcaggctgccacgggggaacctccggtggggcggggaagcagccggaagatgacg
ctgagcgccaaggagattaaacaggtccaggacgataagcagaagctcacggagcacttt
atccagacgttgccactgctgctgaacaagtacagtgccgatagtgagaagctgacgaat
ctgctagcgattccgcagtactttgacctggaattgtacacgacgaccaggcaggaggcg
aacctgcaggcgctgctggacaaaatgacgcacatcatgtcgatccacgttgatcgcgaa
gtgctggagacttgctcgaagacatttgagtttctatgcacagagggaagcgccatctac
acccggtgcgacgtggccagatcaaacgtaatcgacgagtgcgtcaaccgctacaaggaa
gccatcgacgactatcgaaacctaatcgctggcgaagaaacccccaacgaagacgaaatc
tacaacgtcaacatcagcctcaaaaaggtctcgatcctctactcgtgccacaatctgaac
ccgtggaacctgttcgactcgctataccaggacatcgaagagagcctttccgaaaacgcc
ggcgacaacggaatcccgcacgaagccctcgtctactgcatcgaggcgtgcttcttctcc
atcaactggggcctctacttcctcgaaaacaccatggaccgatcggcggcagccgaagtt
gacgaactgtccaccaacctcaacaaatacctcaacgcgtgcaacgagctgatgcactac
gaggtcgcccccaccgtccaggaagcggcctacatgtccatctgcgacctggtggtggtg
ttcagcgatcagctcgcaacccaccagaacgaaagcattcgcaagttggtgtttgtgccg
agtgcggagcagcagggcttgctgaacgagtttgtgcaggcgaacgtgttctcgaccgag
caggaggaaggtcacgacgagacgcgcatcgaggagctgcacaagaggaggaactttttg
gccgcgtattgtaaactgattgtgtacaacattctgccgatgaagtcggctgcggatatt
tttaagcactatttgaggtgctacaacgagtacggcgacatcatcaaaacaacgctcggc
aagacgcgcgaaatcaacaaggtcaactgcgccatgaccatgtgtctcagcctgatcaac
atcttcaaggacatccaggacgcgtcgccgggcggtcgcgtctcgcgcaactcgcaagaa
ttcgccgacctcaaagaactggccaagcgattcgcgctctcgttcggactggacgcggtc
aagaaccgggaagcgattacggtgttccaccgggccgggattctgttcgcggtgaccgtt
cccgccgacgggtacgaagatccgtccgctccgccgccctgcattgccttcctggaagcg
ctggccgagctgaccaacaagctgatcaagcaggacaagaagttgattctcagcttcctg
gagcgccgcctgaacgcgggaatcccgtccagccggtccgaggactggcagccgctgatg
gcgtacaaaaactcgctgctccacggcgaaacggaccagctgccgccggccactgccgcg
aagcgggcctactcgcgcaagaagaaggactatgaccgcgaggacgacgaggaggaacac
gacgacgaggacgatgcggattacgtggcgtaa
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