Culex pipiens pallens (northern house mosquito): 120421741
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Entry
120421741 CDS
T07310
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120421741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120421741
03041 Spliceosome [BR:
cpii03041
]
120421741
03036 Chromosome and associated proteins [BR:
cpii03036
]
120421741
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120421741
Spliceosome [BR:
cpii03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
120421741
Complex B
120421741
Complex C
U2 SnRNP specific factors
120421741
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
120421741
TFTC complex
120421741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
120421741
NCBI-ProteinID:
XP_039440941
LinkDB
All DBs
Position
3:complement(5915418..5926442)
Genome browser
AA seq
1215 aa
AA seq
DB search
MYLYNFILQRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEVFG
VIRSLMSFRLTGGTKDYAVVGSDSGRIVILEYNAAKNQLEKVHQETFGKSGCRRIVPGQF
LAIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSSTLTYHMVGVDVGFENP
MFACLEIDYEEADLDPTGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMFF
FLVQTEQGDIFKVTLETDDDVVAEIKLKYFDTVPPATAMCVLKTGFLFVACDFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVMVDEIHSFAPILGCQVADLANEDT
PQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVN
ATLVLSIGDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIIKCAVNSRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMALGSVPAGEQ
RAWFLAVGLADNTVRIISLDPADCLSPRSMQALPSAAESLCIVEMGTGESNEEGTVSTAG
CFYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWL
SYYYQNRFHLTPLSYETLEYASGFSSEQCAEGIVAISTNTLRILALEKLGAVFNQITFPL
EYTPKRFLIHNETGKLIISETDHNAYTEETKNIRKKQMADEMREAAGEDEQELANEMADA
FINEVLPEDQFSSPKAGAGMWASQIRVMDPINGHTYSKVQLAQNEAVMSMALVRFTVDQK
WYVVAGVAKDLALNPKITNGGFIDVYKYDFHTHQLEHYHRTEIDDAPGAICSFQGRVLVG
IGKVLRIYDLGKKKLLRKCENKHIPNQIVNIQAMGSRVFVSDVQESIYCVKYKRAENQLI
IFADDTHPRWITTSTLLDYDTVATADKFGNVSVLRLPHSVSDDVDEDPTGNKALWDRGLL
NGASQKAENVCTFHLGETIMSLQKATLIPGGSESLIYATMSGTVGALVPFTSREDFDFFQ
HLEMHMRNENPPLCGRDHLSFRSYYYPVKNVMDGDLCEQFTSMDPAKQKSIATDLGRTPN
EVAKKLEDIRTRYAF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaactttatcctgcagcgtgcgaccggcatcacgcacgcggtccacggc
tgcttcgccggcaccaagcagcaggagattctgctgagcaagggcaaaagtttggagctg
gtgcggccggacccgaacacggggaaggtgcacacgctgctgcagacggaggttttcggc
gtgatccggtcgctgatgtcgttccggctgacggggggcacgaaagattatgccgtggtc
ggttccgactcgggccgcatcgtcatcctggagtacaacgcggccaagaaccagctcgag
aaggtgcaccaggaaacgttcggcaagtccggctgtcggcggatcgttccggggcagttt
ttggccatcgacccgaagggtcgtgccgtgatgatcggggcgatcgagaagcagaagctg
gtctacattttgaacagagattcggaggcgcggttgaccatttcttcgccgctggaggcg
cacaagtcgagcacgttgacgtaccacatggtcggagtggacgtgggctttgagaacccg
atgtttgcctgtttggagattgattacgaggaggcggatctggatccgacgggggaagct
gcggcgaagacgcagcagacgttgacgttctacgagttggacttggggttgaaccacgtg
gtccggaagtactcggaaccgctggaagagcacgcgaatttcttgatttccgtgcccgga
ggcaacgacggtccgtctggagtgttgatctgctcggagaactacctgacgtacaagaat
ctcggcgaccagcacgacatccgttgtccgattccgcgccgacgcaacgacctggacgac
cccgaacggggcatgatcttcatctgctcggccacgcaccgcaccaagtcgatgttcttt
ttcctggttcaaaccgagcagggagacatcttcaaagttacgctcgagacggacgacgac
gtcgtggcggagatcaagctcaagtactttgacacggttccgccggccacggccatgtgc
gtgctcaagaccggtttcctgtttgtggcgtgcgactttggcaatcactatctctatcag
atcgctcacctcggcgacgacgacgacgagcccgagttcagctcggccatgccgctggag
gaaggcgacacgttcttcttcgctccacgcccgctcaagaacctggtcatggtcgacgaa
atccactcgttcgcgccgatcctgggctgccaggtggccgatctcgccaacgaggacacg
ccccagctgtacctggcgtgcggccgcggaccccgctcctccatccgagtcctgcgccac
ggtctggaagtgtccgaaatggccgtctccgagctgcccggtaatccgaacgccgtctgg
accgtcaagaaacgcgcggacgacgagttcgacgcgtacatcatcgtgtccttcgtgaac
gccaccctggtgctcagcatcggcgacaccgtcgaggaggtcaccgacagtggcttcctg
ggaacgacgccgacgctgtgctgttccgccctcggtgatgacgccctggtgcaggtctac
ccggacggcattcggcacatccgcgcggacaagcgcgtcaacgagtggaaggcccccggc
aagaagacgatcatcaagtgcgcggtcaacagccggcaggtcgtgattgcgctgtccggc
ggggagctggtgtactttgagatggatccgaccggtcaactgaacgagtacaccgagcgg
aagaagatgcccagcgatgtgatgtgtatggcgctgggttcagtccccgctggtgagcag
cgcgcctggttcttggccgtcggtttagcggacaacacggtccgtatcatctcgctcgat
cccgctgactgcttgtccccgcgatcgatgcaggccctgccgtcggcggccgaatcgctt
tgtatcgtcgagatgggaaccggcgagagtaacgaggaggggaccgtttcaacggcggga
tgtttctacctgaacattgggctgacgaacggagttctgttgaggacggtgctggatccg
gtttctggggatttggccgatacgcgaacgcgttatttaggatcgcgcccggtgaagctg
ttccggatcaagatgcagggctcggaagcggtgctggccatgtccagtcggacctggttg
agctactactaccagaaccggttccacctgactccgctgtcgtacgaaaccctcgaatac
gcgtccggcttctcgagcgagcagtgcgccgaaggcatcgtggccatctcaaccaacacg
ctgaggatcttagccctagaaaagctcggagccgtcttcaaccagatcacgttccccctc
gagtacaccccgaagcgtttcctgatccacaacgaaaccggcaagctaatcatcagcgaa
accgaccacaacgcgtacaccgaggagaccaagaacatccgcaagaagcagatggccgac
gaaatgcgcgaagccgcaggcgaagacgagcaagaactcgccaacgagatggcggacgcc
ttcatcaacgaagtcctcccggaagaccaattctcctccccgaaagccggagccggcatg
tgggcgtcccaaatccgcgtcatggaccccatcaacggccacacctactccaaggtgcag
ctcgcccaaaacgaagccgtcatgtcgatggccctagtgcgattcaccgtcgaccaaaag
tggtacgtcgtggccggagtggccaaggatctcgccctcaaccccaaaatcaccaacggt
ggcttcatcgacgtctacaagtacgacttccacacccaccagctcgagcactaccaccgc
accgaaatcgacgacgcccccggcgcaatctgctccttccaaggccgcgtcctcgtcggc
atcggcaaagtcctgcgcatctacgacctcggcaaaaagaagctcctccgcaagtgcgag
aacaaacacattcccaaccagatcgtcaacatccaggccatgggctcgcgcgtcttcgtc
tccgacgtccaagaatccatctactgcgtcaagtacaagcgcgccgagaaccaactcatc
atcttcgccgacgacacccacccccgctggatcaccacctcaaccctcctagactacgac
accgtcgccaccgccgacaagttcggcaacgtgtccgtcctccgcctcccccactccgtc
tccgacgacgtcgacgaagaccccaccggcaacaaagccctctgggaccgcggcctcctc
aacggcgcctcccaaaaggcggaaaacgtgtgcacattccacctcggcgaaaccatcatg
tcgctccaaaaagccaccctcatccccggaggctccgaatccctcatctacgcgaccatg
tccggcaccgtcggcgccctcgtccccttcaccagccgcgaagactttgactttttccaa
cacctcgagatgcacatgcgcaacgagaatccgccactgtgcgggcgggaccacctcagc
ttccgcagctactactacccggtcaagaacgtcatggacggggatctgtgcgagcagttc
acctcgatggatccggccaagcagaagagcatcgcgaccgatctggggcggacgccgaac
gaggtcgcgaagaagctcgaggacatccggacgcggtacgcgttctaa
DBGET
integrated database retrieval system
