KEGG   Culex pipiens pallens (northern house mosquito): 120421868
Entry
120421868         CDS       T07310                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03420  Nucleotide excision repair
cpii03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120421868
   03460 Fanconi anemia pathway
    120421868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpii03032]
    120421868
   03400 DNA repair and recombination proteins [BR:cpii03400]
    120421868
DNA replication proteins [BR:cpii03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    120421868
DNA repair and recombination proteins [BR:cpii03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120421868
SSDB
Motif
Pfam: ERCC4 LRR_EndoS SAM_KSR1
Other DBs
NCBI-GeneID: 120421868
NCBI-ProteinID: XP_039441102
LinkDB
Position
3:complement(106840537..106845169)
AA seq 1012 aa
MDEEDDQLDAALACSAEQAEADLQRTQEESDDQALGELVDAEEFLASHGVSMLEYERQMF
FDVLHSDGLTVCAKGITYEKVLQNLLKIFCDSTTLVLVVNCSDYEEKLLTSQLDSQHVHE
SSTNATERERVYLLGGIQFMSTRILVVDLLKGRIPIELITGIIVVKAHEIIESCQEAFAL
RLYRQKNKTGFIKAFSRNVEAFTYGYGHVEKVMRNLFVRELFIWPRFHATIQKSLKPYEP
VVVELQIPMSQNMILLQANILDIMNYLVKNIKSLNRLVELQEITVENCVTKQFHKILQSQ
LDSIWHQLSSQTKLIVADLKVLRSLMITTLYHDAVTLYAVMKKYRSTEYALSNSGWTILD
SAEKIFNICKERVFNRNDEFDPEQCPKWKSLSEVLRKEIPTDVKETAGKIRKKEERQKYL
RQQVKVLVLCQDARTCYQLNQYLTQGPEKYLFHMAMKNDVTVAKLAESYRHINREDEPNP
FRIQQVQVKPKEAVLKESTSVEGSTSKTGFLKERIAKRRAEAAKKEAEEEEARKREEEED
RKKVSEMEAELLAKEESEEYHCFRDSYILTMSQKGDANRTMTDDGELDDLCDITQLENGE
FESFAEMEQLDMTRIEKESSRPIVFIQTFKSEINGIASLDRTLEEIKPRYIVMYHSNVTA
IRQIEVFEARQQRTELTRVRVFVIIHSKTVEEQSYLTSLRREKQAFELLIDTKRTMVVPE
YQDGKSEDAITMLQKAQEVSSRQAGGQAADEQVPVTPRIIVDMREFRSDLPCLIHRRGIE
VVPLTITIGDYILSPEICVERKSISDLIGSLNSGRLYNQCVQMTRFYAKPMLLIEFDQNK
PFHLQRNFVVSGDAGSSNADIMQKLQLLTMHFPKLKLVWSPSPYATAQLFEELKQGKLEP
DPDVAALVGSDEAGGPSEMENIAESSNPNIHDFLIKLPGINSKNIGKVMRMCKNLKELLQ
KSQEELRELLGTELHAKMLWEILHVAHKPVQGEAAEKPSASKFKRGFGKRNF
NT seq 3039 nt   +upstreamnt  +downstreamnt
atggacgaagaagacgaccagctggacgcggccctggcctgctcggccgaacaagccgag
gcggacctgcagcgcacgcaggaggaaagcgacgaccaggcgctgggcgaattggttgac
gcggaggaattcctggcctcgcacggggtgtccatgctggagtacgagcggcagatgttt
ttcgacgtgctgcactcggacgggctgaccgtgtgcgccaagggaatcacgtatgaaaag
gtgttgcagaatctgttgaagattttctgcgattcgacgacgctggtgttggtcgtaaat
tgctccgattacgaggagaagttgctcacgtcgcagttggacagccagcacgttcacgag
tcctcgacgaatgccacggaacgcgaacgggtttatctgcttggggggattcagtttatg
agtacgcggattttggtggttgatttgcttaagggtaggattccgattgagctaatcact
gggataattgtggtgaaggctcatgagattatagagtcgtgccaggaagctttcgcgctt
cgattgtataggcagaagaataaaacagggttcatcaaggcgttttcgagaaacgttgaa
gcgtttacttacggatacggccacgtggagaaggtcatgcgcaacctgtttgtgagggag
ttattcatttggccacggtttcacgcgacgatacaaaagtccctgaaaccgtacgagccg
gtcgtcgtggagctgcagataccgatgagccagaacatgattcttctgcaagccaacatt
ctggacattatgaattacctggtgaagaacatcaaaagtttgaatcgtctcgtggaactg
caggagattacagtggagaattgcgtcaccaaacagtttcacaaaattctgcagtcccag
ctggacagcatttggcaccagctcagctcgcagaccaagctgatcgtggcagatttgaag
gtgttgcgaagtttgatgataacaactctgtaccacgatgccgtcacgttgtacgctgta
atgaagaaatatcgctcgactgagtacgcgctcagcaattccggctggaccattctagat
tctgcggaaaagattttcaacatttgcaaggagagggtcttcaaccggaatgacgaattc
gacccggagcaatgtcccaagtggaagtccctgtcggaagtgctgcgcaaggaaattcca
accgacgtgaaggaaacggccggcaagatccgcaaaaaggaagagcgccaaaagtatctg
cgtcagcaggtgaaggtgctggtgctgtgccaggacgcgcgaacctgctaccagctgaac
cagtatctcacgcaaggccccgaaaagtatctcttccacatggcgatgaagaacgacgtg
acggtggcgaagctggccgaaagctaccggcacatcaaccgggaggatgagccgaacccg
ttccggattcagcaggttcaggtcaaaccgaaggaagctgtgctgaaggaatcgacgtcg
gtggaggggtcgacgagcaagactggtttcctgaaggaacggatcgccaaacgacgagca
gaggcggccaagaaggaggccgaagaggaggaagctcgcaaacgggaagaggaagaagat
cggaaaaaggtttccgaaatggaggcggaattgcttgcgaaagaggagagtgaagagtac
cattgcttccgggattcgtacatcctaacgatgtctcagaaaggagacgcgaatcgcacc
atgacggacgacggagaattggacgatctatgcgacatcacccagttggagaacggcgaa
tttgagtcgtttgccgagatggaacagctggacatgaccaggattgaaaaggaaagcagc
cgaccaatcgtattcattcaaacgttcaagagcgaaatcaacgggatcgcatcactggac
cgaacgctggaggagatcaagccccgttacatcgtcatgtaccacagcaacgtaacggcg
atccgacagattgaagtgttcgaagctcgccagcagcgaacggaactgaccagagttcgc
gtgtttgtgataattcactcgaaaaccgttgaagaacagtcctatctaacttcgctccga
cgagagaagcaggccttcgaactgttgatcgacaccaagcgaacaatggtcgttccggag
taccaggacggcaagtccgaggacgccatcacgatgctgcagaaggcacaggaagtttcc
tcccggcaagccggaggccaagccgccgacgaacaggtccccgtaacgccacgaatcatc
gtggacatgcgcgagttccggtccgatttgccgtgcctcatccatcggcgtggaatcgag
gtcgtcccgctcaccatcacgatcggtgactacatcctttccccagaaatttgcgtcgag
cgcaaatccatttcagacctgatcggttcgctcaactcgggccgcctctacaaccagtgc
gtccagatgacgcgcttctacgccaagcccatgctgctgatcgagttcgaccagaacaaa
ccgttccacctgcagcgcaactttgtcgtgtcgggcgacgccggctcctcgaacgcggac
attatgcaaaagctgcagctgctgacaatgcactttccgaagctgaagctcgtctggtcg
ccgagtccgtacgcgacggcgcagctctttgaagagttgaagcagggcaagctggagccc
gatccggatgtggcggcgctcgtgggctccgatgaagctggtgggccgagcgagatggag
aacattgccgagagttcgaacccgaacattcacgactttctcatcaagctgccggggatt
aactccaagaacatcggaaaagttatgcgaatgtgtaaaaatctgaaggaattgctccag
aaatcgcaggaagaactgcgcgagctgctgggcacggaactgcacgcgaaaatgctgtgg
gaaattttgcacgtggcgcacaaaccggtgcagggagaagcggccgagaagccgtcggcg
tccaagtttaagcggggctttggaaagagaaatttttaa

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