Culex pipiens pallens (northern house mosquito): 120421948
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Entry
120421948 CDS
T07310
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4 homolog
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120421948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120421948
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120421948
mRNA degradation factors
5'-3' decay
Decapping complex
120421948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
120421948
NCBI-ProteinID:
XP_052563651
LinkDB
All DBs
Position
2:complement(48480856..48488759)
Genome browser
AA seq
1376 aa
AA seq
DB search
MLILVLIGTVQIGRALLQGLRQQQQDRQIPEGQQVVEERSEGSSRMSKTNTSGASSLAST
AIVFNKDEKQHCFEINGRNVTVLGSLGKHDHGSSKVKLKNIVDYKWEQRNYPGRLIACHG
EGKLIAYAITVNHRQTPEGMVRIVHLGLGQRALIKGMSGEVLDLQFAHSSSQILLGIIEQ
IALHVHSVKIENEKIVCSMLLKVNDPLDGHVPTRDKISWCPCLPDSTHDADDYASQLLVW
SRGDIFQCYSISTVVQHYGAGEISGKDISEGGFKFQDSLPLITXGIFSADGTTLAVSCED
DVIRFYQVYKHTNDGNPRCLHKWKPHGGKTISSFFFLDNYTDQTLWKHAITCAENNTEIK
VWCCETWECTQTIKFIPSIEQPLCFKVEIDPTSSYLVLSDMTTRELYVLQVRKDASLPSN
GAAAITTNGKSPEGGGDTKSDHNSTSLSNISSATSASNSTSKAYISSIAEFPLSSPILSF
GILDVAVRMCKTSDAYLIEELEDYDEENSSLYCVVIRMFLVQPKSVQECHLFYQPNVTFG
TDVRSTLSSISSSDYKNVSLSSISSGLAAKETTPTNGPAEASLVPIIPENNTSTTTEPTN
ELKRILSPNVIADPAAIRAVANTSGSSAGSAQPKVTLMTPDSFAATSEKSNADTEAVNPD
VLNTLFMLANATKQQQLKTNAPTAASAAATGSSPNDTLQADKQSPLNMLNIVNSTMIEEQ
EQAKVRKSVELQQKVAAMQETPPVPPMPSAEMLASGGSSPSREVQEILSLKDNDCLNEYY
DSDNILLDETDGIGADDDELNDLENEIIEDLDDDEGYNFKNIDDDDDEEELGQRRVSTQK
SAPVPAPQKVVPEVKPINKEPVAPVATAEQVTIKSEPKSSIDWPKVPEVPHPPQTTFLGS
NPQAVPVPVAPAPPLIVTVPQNSKHLEEKLDRLLDIVQAQSRQISDLRTQLHEQQNKNAE
ELNRYQASLGQVKQSINTRITELVTRYDQKVRAETQLASHNQILQIRDMITQTLPAIMAK
GISDRVIPMIMTELNRSMLPMIGSKIDQIATQMKIELASKIQHTDLTMRNTIDIVCRSQS
FVEAVGNSIQAGVRKGLEQVYQESLRNIILPGYERSSQELFRQLNLTFSAGTKEYVQKLD
QYVAQQKTVTDRTQELAELIKKVPEQVNGTADRQNKASTTVLREDIGRDFKVLQTNLLKI
LRDTIRQEIEKGLEAQASSLEDSVLSAVRSQAQTPAPSMVDVQEQIRQMLTHAQINKAFH
KALLSNDLSLVEFTMEKAEFRLVFNPCPLEQTVLLSLIQQISADMSNYNDLKHRYLTESI
INLRWTDPITKEHAPKVMRELTQNCQNFLAANPTSSLATGLRMLLMGIQALGLKQI
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgctaattcttgttttgattggaacagttcagattggtcgcgcactcctccaagggctt
cggcagcagcaacaagaccggcagattccggaaggacaacaggttgtggaagagcgttcg
gagggtagcagcaggatgagtaaaacgaacacttcgggcgcgagcagcctggcctcgacg
gcgatcgtgttcaacaaggacgagaagcagcactgcttcgagattaacgggcggaacgtg
accgtgttgggcagtttgggcaagcacgaccatgggagctcgaaggtgaagctaaagaac
atcgtggactacaagtgggagcagcgcaactatccgggccggttgattgcgtgtcacggc
gaggggaagctgattgcgtacgcgattaccgtgaatcaccgccagacgcctgagggaatg
gttcggatcgtgcacttgggactcggtcagcgcgcgctgattaagggaatgtccggcgag
gtgttggatctgcagtttgcgcacagttcgtcgcagattctgctcgggatcatcgagcag
atcgcgctgcacgtgcacagcgtcaagatcgagaacgagaagatcgtgtgctcgatgctg
ctgaaggtgaacgatccgctcgatgggcacgtcccgacgcgggacaagatctcgtggtgt
ccgtgtctgccggacagcacccacgacgcggacgattacgccagccagctgctggtgtgg
agccgcggggacattttccagtgctacagtattagtaccgtggttcagcactacggcgcg
ggcgaaatctccggcaaggacatctccgagggcgggttcaagttccaggactcgctgccg
ctgataacgntggggatcttctcggcggacggaacgacgctggcggtcagctgcgaagat
gacgtcattcggttctaccaggtgtacaaacacaccaacgatgggaacccgcggtgcctg
cacaagtggaagccgcacggcggcaagacaatcagtagcttcttctttttggacaattat
acagatcaaaccctctggaagcacgcgataacctgcgcggagaacaacaccgaaatcaag
gtctggtgctgcgaaacctgggagtgcacccagacgatcaagttcattccgtcgatcgag
cagccgctctgcttcaaggtcgaaatcgacccgacctcgtcgtacctcgtcctctccgac
atgacgacccgcgagttgtacgtgctgcaagtgcgcaaagacgccagtctgcccagcaac
ggagccgcagccatcaccaccaacggcaaatccccggaaggcggaggagacaccaagtcc
gaccacaactcgacctcgctgtccaacatcagctccgccacgagcgcgagcaattcaacc
agcaaggcgtacatctcttcgatcgcggagttcccactttcgtcgcccatcctcagcttc
ggcatcctggacgtggccgtccggatgtgcaaaacgagcgacgcctacctgatcgaagag
ctggaagattacgacgaggaaaactcgtccctttactgcgtcgtcatccggatgttcctg
gtccaaccgaagagcgtccaagagtgccacctgttctaccaaccgaacgttactttcggc
acggacgtgcgtagtacgctctccagcatcagcagctccgactacaagaacgtctcgctt
tcgtcaatttccagcggcttggccgccaaagagacaaccccaaccaacggcccagcggaa
gcctccctcgttccaatcatcccggaaaacaacaccagcacaacaacggagccaaccaac
gagctgaagcgaatcctttcgccaaacgtaatcgccgatccggccgccatccgagcggtg
gccaacaccagcggaagttccgccggcagcgcccaacccaaggtgaccctcatgacgccg
gattcgttcgctgcgaccagcgaaaagtccaacgcagacaccgaagccgtcaatccggac
gtcctcaacacgctgtttatgctggcgaacgccaccaagcagcagcagctgaagacgaac
gcgcctacggcggcgtcggccgcggccaccggaagttcaccgaacgacaccctgcaggcg
gacaagcaatcgccgctgaacatgctgaacatcgtcaacagcaccatgatcgaggagcag
gagcaggccaaggtgcgcaagtcggtcgagttgcagcagaaggtggcggcgatgcaggaa
acgccccccgttccgccgatgccgtcggcggagatgttggccagcggcgggtccagcccg
agccgggaagtgcaggagatcctgtcgctcaaggacaacgactgtctgaacgagtactac
gactcggacaacattctgctggacgaaacggacggcatcggggcggacgacgatgagttg
aacgatctggagaatgaaatcatcgaagatctggacgacgacgaagggtacaacttcaag
aacattgacgacgatgatgacgaggaggagctgggtcagagaagggttagcacgcaaaag
tcggcgccggtgcctgctccgcagaaggtcgtccccgaggtcaaacccatcaacaaagaa
ccggttgcaccggtggccaccgccgagcaggtcacgatcaagagtgaaccgaagagtagc
atcgattggccaaaggtgccggaagtgccacatccaccgcagaccaccttcctcggatcg
aacccgcaagcggtaccggttccagtcgcccctgcgccaccactgatcgtgaccgttccg
caaaactccaaacatctggaggaaaaactcgaccgactgctcgacattgtccaagcacaa
tcccgccaaatctccgaccttcgcacgcagctgcacgagcagcaaaacaaaaacgccgaa
gagctgaaccgataccaggccagcctcggtcaggtcaagcagagcatcaacacccgaatt
acggaactggtcacgcggtacgaccagaaggttcgcgccgaaacgcaactcgccagccac
aaccagatcttgcagatccgcgacatgatcacgcaaaccctaccggccatcatggccaaa
ggcatctccgatcgcgtcatcccgatgatcatgaccgagctgaaccgctcgatgctgccg
atgatcggctccaaaatcgaccagatcgcgacccagatgaagattgagcttgcgagcaag
attcagcacaccgacctgacgatgcgcaacacgatcgacatcgtgtgccgcagccagagc
ttcgtcgaagccgtcggcaactcgatacaggccggcgtccggaagggcctggagcaggtc
taccaggaatctctgcgcaacatcattctgcccgggtacgagcgctcctcgcaggaactg
ttccgccagctgaacctgaccttctcggccggcacgaaagaatacgtgcaaaagctcgac
cagtacgtcgcacaacagaaaaccgtcaccgaccgcacccaggagctggccgaactcatc
aagaaggttcccgagcaggtcaacggcaccgccgaccggcagaacaaggccagcacgacg
gtcctgcgcgaggacatcggccgagactttaaggtgctgcagacgaacctgctgaagatc
ctgcgcgacaccatccggcaggagatcgaaaagggcctcgaagcgcaggcttcctccctc
gaggactccgttctgtccgccgtacgatcacaggcccaaacaccggccccgtccatggtg
gacgtgcaggaacagatccgccagatgctgacccacgcccagatcaacaaggccttccac
aaagcgctgctctccaacgatctgagcctcgtcgagttcaccatggaaaaggccgagttc
cggctcgtcttcaacccgtgtccgctcgagcaaaccgtactgctgtcgctgatccagcaa
atctccgccgacatgtccaactacaacgacctgaagcacaggtacctcaccgagtcgatc
atcaacctgcggtggaccgacccgatcacgaaggagcacgccccgaaggtgatgcgcgag
ctgacccaaaactgccagaactttttggcggccaacccgaccagctcgctcgcgaccggc
ctgcggatgctgctgatgggcatccaggcgctcggcctcaagcagatctga
DBGET
integrated database retrieval system
