Culex pipiens pallens (northern house mosquito): 120422217
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Entry
120422217 CDS
T07310
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120422217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120422217
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120422217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120422217
NCBI-ProteinID:
XP_039441537
LinkDB
All DBs
Position
2:complement(205141932..205142955)
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AA seq
274 aa
AA seq
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MDLKTYKKIHPVKYYKDHLESNIRPDGREVGDLRPLAINFGSITSADGSSIVKIGNTTVV
CGIKAELAPPKPVEPETGFLVPNIEISPLCSPKYRPGPPSEEAQVYSCSLADAILNSGCV
NLKDLCITKEKLVWALYCDLVCLDHDGCVFDASVIALVAALHTLTLPRMRHNADTDEREV
LEEEPREALKLSSIPVTTSFAVLCGRIVADPTAEEEALATSTITITICDATLSYINKSGG
EPVEQELLDQCIENAMKREKSVRALIKTMVKNKK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaaacttacaaaaaaattcacccggtcaaatactacaaggaccacctcgag
agcaacataaggccggatggtcgggaagtcggagacctccgcccgctggccatcaacttt
ggctcgatcacatcggccgacgggtcgtcgatcgtcaagatcggcaacacgaccgtcgtg
tgcggcatcaaggccgagttggcgccgccgaaaccggtcgagccggaaaccggatttctg
gtgccgaatatcgagatttcgccgctgtgctcgcccaagtaccgtccgggaccgcccagc
gaggaggcccaggtctacagctgctcgttggcggacgcaatcttgaactctggctgtgta
aatttgaaggatctttgcatcacgaaggaaaagctcgtttgggcgttgtactgcgacctg
gtttgcctggaccacgacgggtgcgtgtttgacgcgtcggtgattgcgctggtggccgcc
ctgcacacgctgaccctgccccggatgcgccacaacgcggacacggacgagcgggaggtg
ctggaggaggaaccgcgggaagcgctcaagttgagctcgattccggtgacgacgtcgttt
gcggtgctctgcgggaggattgtggcggatccgacggcggaggaggaggcgctggccacg
tccaccatcacgatcaccatctgtgacgccacgttgagctacatcaacaagagcggcggc
gaaccggtggagcaggaacttttggaccagtgcatcgagaacgccatgaagcgggaaaag
tcggtccgggcgctgatcaagacgatggtgaagaataaaaagtag
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