KEGG   Culex pipiens pallens (northern house mosquito): 120422442
Entry
120422442         CDS       T07310                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03030  DNA replication
cpii03410  Base excision repair
cpii03420  Nucleotide excision repair
cpii03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120422442
   03410 Base excision repair
    120422442
   03420 Nucleotide excision repair
    120422442
   03430 Mismatch repair
    120422442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpii03032]
    120422442
   03036 Chromosome and associated proteins [BR:cpii03036]
    120422442
   03400 DNA repair and recombination proteins [BR:cpii03400]
    120422442
DNA replication proteins [BR:cpii03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120422442
  DNA Replication Termination Factors
   ELG1-RFC complex
    120422442
Chromosome and associated proteins [BR:cpii03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120422442
DNA repair and recombination proteins [BR:cpii03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120422442
  Check point factors
   HRAD17(Rad24)-RFC complex
    120422442
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_14 AAA_11 AAA_assoc_2 RuvB_N AAA_16 DUF815 ResIII AAA_30 DEAD AAA_7 PhoH RCF1-5-like_lid AAA_5 AAA_24 AAA_19 bpMoxR AAA_3 Mg_chelatase AAA_2 TIP49 Thioredoxin_6 ATPase_2
Other DBs
NCBI-GeneID: 120422442
NCBI-ProteinID: XP_039441818
LinkDB
Position
1:16762693..16763971
AA seq 330 aa
MLKDAKSNLPWVEKYRPATLDDLISHEEIISTINKFINENQLPHLLFYGPPGTGKTSTIL
ACARQLYKPQTFNQMVLELNASDDRGINIVRGQILNFASTRTIFSGGYKLIILDEADAMT
NDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFAPLNAEQILPRLEHVVE
AEGIKVSEDGKKALMTLAGGDMRKVLNVLQSTWMAYKDVTEDNVYTCVGHPLKSDIANIV
KWLLNTESFKEIFENIQELKTNKGLALEDILTEIHLYVHRMELPPRVMSLLLIKMAAIEE
RLAAGCVEKPQMAALIAAFQIARDQVIVEG
NT seq 993 nt   +upstreamnt  +downstreamnt
atgctgaaggacgccaaatcgaacctgccctgggtggagaagtatcgcccggccacgctc
gacgatctaatctcgcacgaggaaattatctccacgatcaacaagttcatcaacgagaac
cagctgccgcacctgctgttctacggtccgcccggaacgggcaaaaccagcacgattctg
gcctgcgcccggcagctgtacaaaccgcaaaccttcaaccagatggtgctggagttgaac
gcgtcggacgaccgtggcatcaacattgtccgcggccagatcctgaactttgcctcgacg
cggacgatcttcagcgggggctacaagctgatcatcctggacgaggcggacgccatgacg
aacgacgcccagaacgcgctccggcggatcatcgaaaagtacacggacaacgtgcggttc
tgcatcatctgtaactacctgagcaagatcattccggcgctgcagtcgcgttgcacgcgg
ttccgctttgcgcctctgaacgccgagcagattctgccccggctggagcacgtggtggag
gcggagggcatcaaggtgtccgaggacggcaagaaggcgctgatgacgctggccggcggc
gacatgcgcaaggtgctgaacgtgctgcagagcacctggatggcgtacaaggacgtgacc
gaggacaacgtgtacacgtgcgtgggccacccgctcaagagcgacatcgccaacatcgtc
aagtggctgctcaacaccgagagcttcaaggagatcttcgagaacatccaggagctcaaa
acaaacaaagggctagcgctggaggacatcctcacggagatccacctgtacgtgcaccgg
atggagttgccgccgcgggtcatgtcgctgctgctgatcaagatggccgccatcgaggag
cggctggccgccgggtgcgttgagaagccccagatggcggcgttgattgccgctttccag
attgcccgcgatcaggttatcgtcgagggttga

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