Culex pipiens pallens (Northern house mosquito): 120423155
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Entry
120423155 CDS
T07310
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120423155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120423155
03009 Ribosome biogenesis [BR:
cpii03009
]
120423155
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120423155
Spliceosome [BR:
cpii03041
]
Complex A
U2 snRNP components
U2 related factors
120423155
Complex B
120423155
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120423155
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
90S particles
Helicases
120423155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
AAA_25
Flavi_DEAD
ABC_tran
AAA_24
AAA_30
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
120423155
NCBI-ProteinID:
XP_039442768
LinkDB
All DBs
Position
2:complement(119215107..119220909)
Genome browser
AA seq
729 aa
AA seq
DB search
MSKRRIEVMDPFIKKLREEKGMLDSGASSSKSGGSVSSGSGGSGGSSGKMNPLNGIPYTQ
NYYNLYKKRITLPVFEYRADFMRLLSEHQCIVLVGETGSGKTTQIPQWCVDFARCSGSKG
VACTQPRRVAAMSVAQRVSEEMDVILGMEVGYSIRFEDCSSAKTILKYMTDGMLLREGMS
DPMLETYQVILLDEAHERTLATDLLMGVLKEVIRQRKDLKLVIMSATLDAGKFQQYFDNA
PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEACK
RVKREIDNLGPEVGELKCIPLYSSLPPNMQQKIFEPAPPKRPNGAVGRKVVISTNIAETS
LTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTE
KAYKTEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA
ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEMK
KAADDAKKRFAHLDGDHLTLLNVYHAFKQNNEDPSWCYDNFINFRSLKSADNVRQQLARI
MDRFNLKRTSTDFNTTNYYFNIRKALVQGFFMQVAYLEQTKHYVTIKDNQIVQLHPSTCL
GHRPNWVMYNEFVLTTKNYIRTVTDVKPEWLLQIAPQYYDMNNFPECEAKRQLTVIAAKL
ETKQYQQGF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccgcatcgaagtgatggatcccttcatcaagaagctgagggaggaaaag
ggaatgctggattccggtgcatcctccagcaaaagtggcggctccgtttcgtccggtagt
ggcggttcgggaggttcttcggggaagatgaatccacttaacgggattccgtacacgcag
aattactacaatctgtacaagaagcgcatcacactgcccgtgtttgagtaccgcgcggac
ttcatgcggctgctgtcggaacatcagtgcatcgtgctggtcggtgagaccggttccggc
aagaccacccagattccccagtggtgtgttgactttgcccggtgcagcggttcgaaggga
gtcgcgtgcacgcagccccgtcgagtggcggccatgtccgtggcgcagcgtgtttccgag
gaaatggacgtgattcttggcatggaagtcggttacagcatccgtttcgaggactgctcg
tcggccaagaccattctcaagtacatgacggacggtatgttgctccgcgagggcatgagc
gatccgatgttggagacgtatcaggttattttgcttgacgaggctcacgagcgtacgttg
gccacggatctgctgatgggtgtcctgaaggaggttatccggcagcgcaaggatctcaag
ctggttattatgtctgccacgctggacgctggcaagttccagcagtactttgacaatgcc
ccgctgatgaacgtgccaggtcgaacgcatccggtcgagatattctacaccccggaaccg
gagcgggactatttggaggccgctatccgtacggtgatccagattcacatgtgcgaggac
atcgagggcgacattctaatgttcttgaccggccaggaggaaattgaagaggcttgcaag
cgtgtcaagcgagagatcgataatctcggtccggaggttggcgagctcaaatgtattccg
ctgtactcgtctctgccgccgaacatgcagcaaaagattttcgagccggcgcctcccaag
cgcccgaacggagcggttgggcgcaaggtggtcatttcaaccaacattgccgaaacatct
ctcaccatcgacggagttgtgttcgtgattgatccgggcttttccaagcaaaaggtttat
aacccgcgaatccgcgtcgaatcgcttctagtttctcctataagtaaggccagcgcgcag
caaagagctggtcgagctggccgaacaagaccgggaaaatgtttccggctgtacacggaa
aaagcatacaaaaccgagatgcaggacaacacgtacccggaaattttgcggtccaatttg
ggaacggtcgtcttgcagctgaagaaactcggaatcgacgatttggtgcactttgacttt
atggacccaccggcaccggaaacgctgatgcgagcactcgagctgctgaactacttggcc
gcgctggacgacgacggaaacctgaccgacctgggcgccgtgatggccgagtttccgctg
gatccgcagctagccaagatgttgatcgccagctgccagcacaactgctccaacgagatc
ctctcgatcacggccatgttatcggtcccgcagtgtttcgtacgcccgaacgagatgaaa
aaggccgccgacgatgccaagaagcggttcgcccacctggacggcgaccacttgacgctc
ctgaacgtgtaccatgccttcaagcagaacaatgaggatccgagctggtgctacgataac
tttatcaacttccgctcgctcaagtcggccgacaatgtgcgccagcagctcgcccggata
atggaccggttcaacctgaagcgcacgagcaccgactttaacaccacaaactactacttc
aacatccggaaggcgctggtgcagggcttcttcatgcaggttgcctacctggagcaaacg
aagcactacgttacgatcaaggataaccagatcgtccagctgcacccgtcgacctgtcta
ggccaccgacccaactgggtgatgtacaacgagtttgtgttgaccacgaaaaactacatt
cgcaccgtcaccgacgtgaaaccggaatggttactgcagattgcgccacagtactacgac
atgaacaatttccccgagtgtgaggccaagcgccagctgacggtcatagcagccaagctc
gagacgaaacagtaccagcaaggattttag
DBGET
integrated database retrieval system
