Culex pipiens pallens (northern house mosquito): 120423369
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Entry
120423369 CDS
T07310
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120423369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120423369
03036 Chromosome and associated proteins [BR:
cpii03036
]
120423369
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120423369
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
120423369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
120423369
NCBI-ProteinID:
XP_039443080
LinkDB
All DBs
Position
3:complement(142002493..142026460)
Genome browser
AA seq
1699 aa
AA seq
DB search
MSKRRRNSSAQSRYEDGDDSDESSNPAQSPAPSVTARKKKKLDPSELCQQLYESIRNFKK
EDGSTLCDTFIRAPKRRQEPSYYEVVANPIDLLKVQQKLKTEAYEDVEDLRGDIELIVKN
AKAFYKPDSAEYGDACQLLEVFNANKAKLVEQDGQEGGSTEVKSARKITRHRKSMAIDDE
AEDDGFDPYEELFNSVMTATDENRELHRMFQLLPSKKLYPDYYDVIDHPIDLKCVAVKIQ
TNAYATLNDMEKDLLQIVKNACTFNEPGSQIYKDAKTLKRIFMARKLDIEAGRSRKSSNR
KGRGASLSAMVAALKEEAESSDDDLDDSMDTEGEGPLWQLFDQLYNTANTNDPNVVGAPL
GETLWKLPARRFHPEYYNLIKKPISMGQIRNKLKKGLYANVTDMSADLYVMLDNAKKANA
PSSKIYKDAVKMQKLLNQKLIDAGDLEESDDEDDTDSSSLAAATPAKGVASGRKSRARSV
IPMQSPTQSGGSGGATSTPMVKSRPSPLATLKKKLISLHDYLLEYTTGGRQPMALFVEKP
SKKLYPDYYQIIQHPIDMTTIESNIKSDRYGTLDDVVGDYRLMFSNCRKYNEEGSQIYDD
ANILEKVLNEKLKEFSHISKRTNTPKNTKTKTKGMSLEAKLKHLYDTIREYREPKANRQL
AFIFMKLPSKNEYPDYYDIIKNPLDLDRIEQKLRKNAYDSVDELSADFMLMFENACKYNE
PDSQIYKDALCLQQLIIQTKQALRSDETVPDVQQAVQELLLSLFTTLYNYQDEENRCYSD
SLFELPEHDETPEGAKVRGISLDLVKRRLDKGLYKRLDMFQEDIFACMERARKLSRTDSQ
VFEDSIELQSYFIKKRDELCRNGNVLDSPALSYSAMHLSAAVEALRQSKLLEEEADTDTD
GVQPSQGESMTIDQKVFSPGDFVYVDLPDNKIPGIMYIERLWTNSEGVKMMYGNMVLRPY
ETYHLQTRKFMEQEVFKSDQHQAVPLTQAQNKCFVMHVKDYFKMRPEGFADKDVFVCESR
YSARGRCFKKIKTWNLARANDPVKLVPRETSLEMRRVMSVFKERVEKHKEELSELQMQEA
LVEKDKPNVVVFVNGAEEGNVYYEQYNTVCSGVVKTGDFVYVATEGGKQSVAQIQSIWET
KDNKSFFRGPWLLTPPEVPGTISKLFYRQEMLLSTVQETTPTVAIVGRCAVLEHHEYITR
RPTEIAEPDVFLCESIYDEMKKQIRKVVPGNLKRFNHTQAVTTDEIFFFRRPINPPKVSC
GEILAGQENRTLGLGDLDCKDEFGIIDDSIDGPPSIGSDMLMTASPIPSNALATPQTGTG
KKDKKAGKKLVTGYILYSSEHRKGICASNPDCTFGEVSRIVGNEWRSLPDHEKAAWEQRA
SKINEENAAKHAAEFGESNCPSPAPGKSDGPLVQEITTNHVYECSWDKCDYQFEDPFDCM
EHCVTDVTGCVYKTFMKAAEQEFSCIWRGCARLRRSMPPFPHMQRLVKHVREVHLTKTPA
KFVAPSDRSKNFVYAKRQSISQAHPSTMKHRPSAAGLGPAGGSASSSQVPVAAASPTVEG
AAGSGGGGTAQGGGQSVAGAGSAGANNQSSNLIPAPYYNFVPAPPAEPLFVTVPPRPQRV
LHSEAYIRYIEGLQAGAQYTTPWPKTLTVTRETLPNQDPNRLPVHWLGKKGRDKPEAVVD
AIWQLRGFLMKDVIQFDRF
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgtcgtcgcaacagctcggcccagagccggtatgaggacggtgacgacagc
gacgagagcagcaatccggcccagtccccggcgccctcggtgaccgcccgcaagaagaag
aagctcgatccgtcggagctgtgccagcagctgtacgagtcgatccggaactttaagaag
gaggacggatcgacgctgtgcgatacgtttattcgggcgccgaaacggagacaggaaccg
tcctattacgaggtggtggccaatccgattgatttgttgaaggtgcagcaaaagctgaag
acggaggcgtacgaggacgtggaggatttgcggggggacatcgaattgatcgtgaagaat
gcgaaggcgttttacaagccggattcggccgagtacggggacgcgtgccagctgttggag
gtttttaacgcgaacaaggcgaagctggtggagcaggatggtcaggaaggggggtcgacg
gaggtgaagtccgcgcggaagattacgaggcatcgcaagtcgatggcgatcgatgacgag
gcggaggacgatgggttcgatccgtacgaggagctgttcaactcggtgatgacggcgacg
gacgagaatcgggagctgcaccggatgtttcagctgctgccgtcgaagaagctgtatccg
gattattacgacgtgattgatcatccgatcgatttgaaatgcgtcgcggtgaagatccag
acgaacgcgtacgccacgctgaacgacatggagaaggatttgctgcagatcgtgaagaac
gcttgtacgtttaacgagccgggatcgcagatctacaaggacgcgaagacgctgaagcgg
atctttatggcgcggaagttggacattgaggcgggtcggtcgcggaagagttcgaaccgg
aaggggcgtggagctagtttgagtgccatggtggcggcgttgaaggaggaggcggaaagc
agcgacgacgatctggacgactcgatggacaccgaaggcgagggaccgctgtggcagctg
tttgaccagctgtacaacaccgcgaatacaaatgatcccaacgtcgtaggggcaccgctc
ggggagacgctgtggaagttgccggcgcgccgtttccacccagagtactacaatctgatc
aaaaagcccatctcgatggggcagattcggaacaagctgaagaagggcctgtacgcgaac
gtaaccgacatgagtgccgacctgtacgtgatgctggacaacgcgaagaaggcgaacgcc
ccaagcagcaagatctacaaggacgccgtcaagatgcaaaaactgctcaaccagaagctg
atcgacgccggcgatctggaggagagcgacgacgaggacgacacggattcgtcctcgctg
gcggcggccacccccgccaagggagtcgccagcggccgcaagagccgtgcccgctcggtc
atcccgatgcaatcgccaacccaatccggcggctccggtggcgccaccagcactccgatg
gtcaagtcgcgtccctcgccgttggccacgctcaagaagaagctcatctcgctgcacgac
tacctgctggagtacacgaccgggggacgccaaccgatggcgctgttcgtggagaaaccc
tccaagaagttgtacccggactattaccagatcattcagcacccgatcgatatgaccacc
atcgaaagcaacatcaaatcggaccggtacggaacgctggacgacgtcgtcggggactac
cggttgatgttctccaactgcagaaagtacaacgaagagggttcgcagatctacgacgac
gccaacatcctggagaaggtgctgaacgaaaagctcaaggaattctcccacatcagcaag
cgtaccaacacaccgaaaaacaccaaaaccaaaaccaagggcatgtcgctggaagccaag
ctcaaacacctgtacgacacgatccgcgagtatcgcgaacccaaagccaaccgccagctg
gcgttcatctttatgaagctcccctcgaagaacgaataccccgattattacgacattatc
aagaaccccctcgatttggaccggatcgagcagaagctgcgcaagaacgcgtacgacagc
gtggacgagctgtccgcggactttatgctgatgttcgagaacgcgtgcaagtacaacgag
ccggactcgcaaatctacaaggacgcactgtgcctgcagcagctgatcatccagacgaag
caggcgctgcgcagcgacgaaaccgtgccggacgtgcagcaggcggtgcaggagctgctg
ctgtcgttgttcaccacgctgtacaactaccaggacgaggagaaccggtgctactcggat
tcgctgtttgagctgccggagcacgatgaaacgcccgagggggcgaaggttcgtgggatt
tcgttggatctggtgaagcgccggctggacaagggcctgtacaagcggctggacatgttc
caggaggacatctttgcgtgtatggagcgggcgcggaagttgagccggacggactcgcag
gtgtttgaggactcgatcgagctgcagtcgtactttatcaagaagcgggacgaactgtgc
cggaacgggaacgtgctggactcgccggcgctcagctacagtgcgatgcacctgagcgcg
gccgtcgaggcgctccggcagtccaagctgctcgaggaggaagccgacacggacacggat
ggggtgcaaccgtcccagggcgaaagtatgaccatcgaccagaaggtgttctcccccggg
gactttgtctacgttgaccttccggataacaagattccaggcatcatgtacatcgaacgg
ctgtggaccaacagcgagggcgtcaagatgatgtacggcaacatggttctgcggccgtac
gagacgtaccatctgcagacgcgcaagttcatggagcaggaggtgttcaagagtgaccag
caccaggccgttccgctgacgcaggcccaaaacaagtgtttcgtaatgcacgtcaaggac
tacttcaaaatgcgcccggagggtttcgcagacaaggacgtgtttgtgtgcgagtcacgg
tacagcgctcggggccggtgcttcaagaagatcaaaacctggaacctggcccgcgccaac
gatcccgttaaactggtcccgcgggagacctcgctcgagatgcgtcgcgtcatgtcggtg
ttcaaggagcgcgtcgagaagcacaaggaagaactgtcggaactgcagatgcaggaagcc
ctggttgagaaggacaaaccgaacgtggtggtgtttgtgaacggcgccgaagagggcaac
gtgtactacgaacagtacaacaccgtctgcagcggggtcgtcaaaacaggagactttgtg
tacgtggccaccgagggtggcaagcaatccgtggcgcagattcaatccatctgggagacc
aaggacaacaagtccttcttccgcggcccgtggctcctaactccaccggaagtccccggc
accatcagcaagctgttctaccgccaggagatgctgctctcgacggtgcaggaaaccacg
ccgaccgtggccatcgtgggacggtgcgccgtcctcgagcatcacgagtacattacacgc
cgtcccacggagattgccgagccggacgtgttcctgtgcgagtcgatctacgacgagatg
aagaagcagattcgcaaggtcgtgccggggaatctgaagcgcttcaaccacacccaggcg
gtcacgaccgacgagatattcttcttccggcggccgattaatccaccgaaggtgtcctgt
ggggagatcctcgccggacaggagaatcggacactcggtctgggcgatctggactgcaag
gacgagttcggcatcatcgacgactcgatcgatgggccaccgtcgatcggttccgacatg
ctgatgacggcttcgccgattccgtcgaacgccctcgccaccccccagacgggcacgggg
aaaaaggacaaaaaggcgggcaaaaagctcgtcaccgggtacatcctgtactcgagcgaa
caccggaagggcatctgcgcctctaatccggactgcaccttcggcgaggtgtcccgcatc
gtgggtaacgagtggcgatcgctgccggatcacgagaaggcagcgtgggagcagcgagcg
tctaaaatcaacgaggagaacgcggccaagcatgcggccgagtttggcgaaagcaactgc
ccgagcccggcgccgggcaaatcggacggaccgttggtgcaggaaattacgacgaatcat
gtgtacgagtgcagctgggacaagtgcgactaccagttcgaggacccgttcgactgcatg
gagcactgcgtcacggacgtcaccggctgcgtgtataaaacgttcatgaaagctgctgag
caggaattttcgtgcatctggcgcgggtgcgcccggctgcggcgcagcatgccacccttc
ccgcacatgcagcggctggtgaagcacgtccgggaggtccacctgacgaaaaccccggcc
aagtttgtcgccccgtccgatcgcagcaagaactttgtgtacgccaagcggcaatcgatc
tcgcaggcgcacccctcgacgatgaagcataggccgtcggcggcggggttggggcctgca
ggagggtcggcctcgtcgtcacaggttccggtggccgcggcaagtccgaccgtggaaggt
gcggccgggtcggggggaggtggaactgctcagggcggcggccagtcggttgcgggagcc
ggatcagctggagctaacaatcagtcaagtaatttaatacctgcgccgtattataatttc
gtcccggctccaccagccgaaccgctgttcgtaacggtgccaccgcggccccagcgggtg
ctccactccgaagcgtacatccggtacattgagggcctccaggcgggcgcccagtacacg
acaccctggcccaaaaccctaacggtgacgcgcgaaaccttgcccaaccaggacccgaac
cggctgcccgtccactggctcggcaagaagggccgcgacaagccggaagccgtcgtggac
gcgatctggcagctgcgcggtttcctcatgaaggacgtcatccagttcgatcggttctga
DBGET
integrated database retrieval system