Culex pipiens pallens (northern house mosquito): 120423472
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Entry
120423472 CDS
T07310
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120423472
03036 Chromosome and associated proteins [BR:
cpii03036
]
120423472
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120423472
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120423472
SLIK complex
120423472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
SLIDE
Motif
Other DBs
NCBI-GeneID:
120423472
NCBI-ProteinID:
XP_039443233
LinkDB
All DBs
Position
2:45059413..45072552
Genome browser
AA seq
1996 aa
AA seq
DB search
MSQQSKEDKSDSENESSNDSKSESGSSDSESESGSGSSSSSSSDNEGDTTGGTAADSSGV
NTSAANDNAQDGTKPEENGNDHQGGSDAEQEEDQSESVSRTQINNSEETNDKSRSSAQTG
GSGTDDSDDDDADRSQENNHNNNNNSGTNNNSDSEDSGKPSNASQSQEDDDDDDDGSASH
QSEDEEHSSKSSYDDEDYAANKRRNNARKKAAAAQARRKGGSSSAAPAKKKKKSSSNRWK
SDSSEESEDASDQDSSDEDASYGAARKAAPKKRAAPAPKAKPKPTKKKRAAAYSSDSGSD
GEQSRQGRSRRATAVSYKEASGDEATDSDDLLEVDPEAEEAAAAAAAEEEKSETIERILE
QRVGRKSATGAGTTCYSVEESGDPNEGFSERADSENAEQQYLIKWTGWSYLHCTWESEET
LKEQRVKGMKKLENYIKREHDIAFWRKHQAGPEDIDYYECQQELQHDLLKSYYNVERVIA
QVEKPEGGLDYLCKWESLPYADSTWEDASLIVKKWERKVEEFREREDSRRTPSKHCKAIR
SRPKFHHLKAQPDYLGVDRGLKLRDYQMDGLNWLILTWCKENSVILADEMGLGKTIQTIC
FLYYLFKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTYLGDVPSREIIRQYEWCF
SNQKLKFNAILTTYEILLKDKTFLGSLSWAALLVDEAHRLKNDDSLLYKALKEFDTNYRL
LITGTPLQNSLKELWALLHFIMPDRFESWDAFDRLYGQTTNDKSYCKLHKELEPYILRRI
KKDVEKSLPAKVEQILRVEMTSIQRQYYRWILTKNFDALRKGMKGSINTFLNIVIELKKC
CNHALLTRPTEFETQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLD
ILAEYLQKRHFSFQRLDGSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINLATADT
VIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTAKSVEEDIVERAKKKMVLDHLVIQ
RMDTTGRTVLDKNGANNTANPFNKDELSAILKFGAEELFKEDEDGDDELVCDIDEILKRA
ETRDEAPEMPGDALLSAFNVTTFDFDEEKETQAIRKPTAAKAPVNAADQEDTKDWDDIIP
TNFRELVEAEERNKELSDLYLPPRRKTLQQLNQANEEGGAGAGVKKRKKRQAEEDSDEEE
SDGSDDGKASKKSSSRGRPSNKEKIGGFNDTELRRFIKSYKKFPVPLKRLEAIAMDAELQ
EKPLSDLKRVAELLQERCVQFMEHSKENDEKEKNASAEEKGNKRGPRAAFSIRFGGVSFN
VKTLLQCVEELAPLDEFLPADADERARWVLNIKTRPANFDCEWNNEDDSRLLRGIYQFGI
GSWEAMKMEDSLALGDKILLNDVEKKPQAKHLQSRAEYLLKIIRKNLELKKGNGKKQRKP
RKPREGKTAISAAIVHSPVHSAKDDGEEGSSNETAAVETSKAKSKKVSESDAHHHEHDAS
SNGPKEEHHHPHKEKKERKKKEKTKEGKKSKKKNTGPMHFTANNEPAQLNIIGDLDPSVF
NECKEKMRPVKKALKTLDNPDQTLPPQEQVNQTRACLLAIGNQINQCLTAFKDPEKIKEW
RSNLWYFVSKFTEFDAKKLFKLYKHALKRSEGEESGAAAGGSSEKKKDHHHHHHHHHSKE
GGGSAQNSPVKDKSAKNVPGTPQALQTLGKIKKISKKDNGSQKVSMEVSTPLADREKEKV
PIERRERKEKKRHHQGATGTPDRGAASGDDHRKEQRDRYLGQDGGGAGSEEDGSHGAKRK
LEDGELADENSKEYKRLHGGGDGRNNRDRDNKWDEYGERGRGGMGRNSGGMPRGAGMFPE
GRGPYPDDRWSGRDRFSDHKRDRYDGYHRNAPPGGYHRDHRDRDRGDRSYKDKRRYPPGG
GSGYYGMPPGGGGGAPGGYYPPGDSGSYRYGASGGGGPGGADFMDYRDGGGRGPGRGGGG
GDYEGRRQPPPPPANP
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagtccaaggaggacaagagcgactcggagaacgagtcgagcaacgacagc
aagagcgagtccggctcgtcggactcggagagcgagagcggatccggctcgtcgagttcc
agctcgagcgacaatgagggcgacaccacgggcggaacggccgcggacagcagcggcgtc
aacacgtccgctgccaacgacaacgcgcaggatgggacgaagccggaggagaacggaaac
gaccaccagggtggttctgatgcggagcaggaggaggaccagagcgagtcggtcagccgg
acgcagataaacaatagcgaagagacgaatgataagtcgaggagcagcgcgcagaccggc
ggttccggaacggacgatagcgatgacgacgatgccgatcggagccaggagaacaaccac
aacaataacaacaacagtggaaccaacaacaatagcgactcggaggacagcggaaagccg
agcaacgctagccagagtcaggaggacgatgacgatgatgacgatgggtcggccagtcat
cagtcggaggatgaggagcattcgtctaaaagtagctacgatgatgaggactacgcggcc
aacaagcgacggaacaatgcccggaagaaggctgcggcggcgcaagcccggcgaaagggt
ggctcaagcagtgcggcacctgccaagaagaagaagaagagcagcagcaatcgctggaag
tcggactcttcggaggagagcgaagatgccagcgaccaggacagttccgatgaggatgcc
agctacggggcggctcggaaggccgcaccgaagaaacgggccgctccggcgcccaaagca
aagccaaagcccacgaagaagaagcgtgcggcggcgtactcgtcggacagcggttccgac
ggggaacagtcccggcagggtcgaagccggcgggcaacggccgtcagttacaaggaggcg
agcggggatgaagcgaccgacagtgacgatctgctcgaggtcgatccggaagcggaggag
gcagctgctgcggcggccgctgaggaggaaaagtctgaaacgatcgagcggatcctggag
cagcgtgtggggcggaagagcgctaccggagccggtacgacgtgctattcggtggaggag
agtggcgatccgaacgagggctttagcgaacgcgccgactcggagaacgccgagcagcag
tacttgatcaagtggacggggtggtcgtatctgcactgtacgtgggagtcggaggaaacg
ctgaaggagcagcgcgtcaaagggatgaagaagctggagaattatattaaacgcgagcat
gacattgcgttctggcggaagcatcaggccgggccggaggacattgactattacgagtgt
cagcaggagctgcagcacgacctgctcaagagttactacaacgtggagcgggtgattgcg
caggttgagaagcccgaggggggattggattatctgtgcaagtgggaatcgctgccgtac
gcggactcgacctgggaggatgccagtttgattgtgaagaagtgggagcgcaaggtggag
gagttccgagagcgagaggatagtcggaggacgccgtccaagcattgtaaggccattcgg
agtcgacccaagttccaccacttgaaggctcaaccggactatttgggcgtggatcgaggg
ctgaagctgcgcgactaccagatggatgggttgaactggttgattctgacctggtgcaag
gaaaactccgtcatcttggccgatgaaatgggtttgggtaaaaccattcagacgatttgc
ttcctgtactatctgttcaaggcgcagcaactgtacgggccgtttttgtgcgttgttccg
ctgagtacgatgaccgcgtggcagcgagaatttgccatctgggcaccggagatgaacgtg
gtgacgtacttgggagatgtgccctcgcgtgagattatccggcagtacgagtggtgcttc
tcgaaccagaagctcaagttcaacgccatcctgacgacgtacgaaattctgctcaaggac
aaaaccttcctcggaagcctcagctgggcggcgctgctcgtcgacgaagcgcatcggttg
aagaacgacgactcgttgctgtacaaggcgctgaaggagtttgacacgaattaccggttg
ctgattacgggaacgccgctgcaaaactcgctcaaagagctgtgggcgctgctgcacttt
atcatgccggatcggttcgagtcgtgggacgcgtttgaccggctgtacggccaaacgacc
aacgacaagtcgtactgcaagctgcacaaagagctcgaaccgtacattctgcggcgcatc
aagaaggacgtcgagaagagtcttccggccaaggtggagcagattctgcgcgtcgaaatg
acctccatccagcggcagtactaccggtggatcctcaccaagaactttgacgcgctgcgc
aagggcatgaagggttccatcaacacattcctcaacattgtgatcgagctgaaaaagtgc
tgcaaccatgcgctgttgacccggcccacggagtttgaaacgcaaaccaaccaggacgaa
gtggtcgttcagctgctgaaagggtccggcaagctggtattgctggacaagctgctctgc
cggctgaaggaaaccggccaccgggtgctgatcttctcccagatggtgcgcatgttggac
atcctcgcggagtacctgcagaagcggcacttttcgttccagcggttggacggtagcatt
aagggtgagctgagaaagcaagcgttggatcactttaacgcggaaggttcgaccgacttc
tgctttctgctgtcgacgcgagccggcgggttgggcatcaatttggccaccgccgacacc
gtcatcatcttcgactcggattggaacccgcagaacgatctgcaggcccaggcacgagcg
catcgaatcggtcagaagaaccaggtcaacatttaccgactcgttacggccaaatccgtc
gaggaggacattgtagagcgagcgaagaagaagatggtgctcgaccacctggtcatccag
cggatggacacgacggggcgaaccgtgctggacaagaacggcgccaacaacacggcgaat
cccttcaacaaggacgaactgtcggcgattctgaagtttggcgctgaggagttgttcaag
gaggacgaagacggagacgacgagttggtttgtgatatcgatgagattttgaagcgggcg
gagacgcgggacgaagcgccggaaatgcccggcgatgcgctgctgtcggcgttcaacgtc
acgacgttcgattttgacgaggagaaggaaacgcaggcgattcggaaacctaccgcggcg
aaagctccggtgaatgccgcagatcaggaggacacgaaagactgggacgatatcatcccg
acaaacttccgggagctggttgaagctgaagagaggaataaggagttgagtgatttgtac
ttgccgcctcggcggaagacgctccagcagctgaaccaagcgaacgaagagggaggggcg
ggtgctggtgtgaagaagcggaagaagcgccaggccgaagaggacagtgacgaggaggag
tcggacgggagtgacgacgggaaggccagtaagaaatcgtcgagtaggggacgaccttcg
aacaaggagaagattggagggtttaacgacacggagctgcggcggttcatcaagagctac
aaaaagtttccggtgccgttgaagcgactggaggcgatcgcgatggacgcggaactgcag
gagaagccactgtcagatttgaaacgggtcgcggagctgctgcaggagcgttgcgttcag
tttatggaacactcgaaggaaaacgatgaaaaggagaagaacgcctcggcggaagaaaag
ggaaacaagcgaggtccgcgggcagcgttttcgatccgcttcggcggggtgtcgttcaac
gtgaaaacgctgttgcagtgcgtggaggagttggctccgttggacgagtttctgccggcg
gacgcggacgaacgtgcccggtgggtgctgaacatcaagacgcgcccggcgaactttgac
tgcgagtggaacaatgaagacgattcaaggttgctgcgaggaatctaccagtttggcatt
ggttcgtgggaggcgatgaagatggaggattcgcttgcgctcggcgataagatcttgctg
aacgacgtcgagaagaagccgcaggcgaagcatctgcagtcgcgggccgagtacttgctg
aagattatccggaagaatctcgagctgaagaagggcaacgggaagaagcagcgcaagccg
agaaagccgcgggaggggaagacggcgatatcggcggcgattgtccactcgccggtgcac
tcggccaaggatgatggggaggagggttcgtcgaacgagacggcggccgtggagacgtca
aaggccaagtcgaagaaggtctccgagtcggatgcgcaccatcacgagcacgacgccagt
tcaaacggaccgaaggaagagcaccatcacccgcacaaggagaagaaggagaggaaaaag
aaggaaaagacgaaagagggcaaaaagagcaagaagaagaacaccgggccgatgcatttt
accgcgaacaacgaacctgcgcagctgaacatcatcggtgatctggatccgagcgtgttc
aacgagtgcaaagagaagatgcgaccggtaaagaaggcgctcaagacgctcgacaatccg
gaccagacgctgccaccacaggaacaggtcaaccagacgagggcctgtctgctcgcgatc
ggcaaccaaatcaaccagtgcttgacggcgttcaaagatccggagaagatcaaggagtgg
cgcagcaatctgtggtactttgtgtccaagtttaccgagttcgacgccaagaagctgttc
aagctgtacaaacatgcgctgaagcgaagcgagggcgaagaatcgggcgcggcggccgga
ggaagttcggagaagaagaaggaccatcaccaccaccatcatcatcaccactcgaaggag
ggtggcggaagtgcgcaaaactcccccgtcaaggacaagtcggcgaagaacgtgccggga
acgccacaggcgttgcaaacgctcggcaaaatcaagaagatctccaagaaggacaacgga
agccagaaggtcagcatggaggtttcgacgccgttggccgaccgcgagaaggagaaggtt
ccgatcgagaggcgcgagcgcaaggagaagaagcgacatcaccagggcgcgacgggaacg
ccggatcggggggcggcttccggggacgatcaccggaaggagcagcgagatcgatatctt
gggcaggacggtggtggtgcgggtagtgaagaggacggttctcatggcgccaagcgtaag
ctcgaggacggggagctggcggatgagaacagcaaggagtacaagcggctgcacggtggc
ggtgatggacgcaacaatcgcgatcgggacaacaagtgggacgagtacggtgagcgggga
cggggcggcatgggacgcaacagtggtggaatgccgcgtggtgccggaatgttccccgaa
ggacgtggaccgtacccggatgaccggtggagtggtcgtgataggttcagtgaccacaaa
cgggaccgatacgacggctaccatcggaatgcaccccccggaggttaccaccgggatcac
cgagaccgtgaccggggtgaccgttcctacaaggacaagcgaagatatccacccggtgga
ggttccggctattacgggatgccacccggaggaggaggaggcgcccccggtggttactac
ccgcctggcgacagcggttcctaccgctacggagcttccggcggtggtggccccggcgga
gcggactttatggactatcgagacggaggaggacgcggaccgggccgaggaggaggcggc
ggcgactacgaaggacgaaggcaaccgcctccgccgccggccaacccgtag
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integrated database retrieval system
