Culex pipiens pallens (northern house mosquito): 120424033
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Entry
120424033 CDS
T07310
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03008
Ribosome biogenesis in eukaryotes
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120424033
09123 Folding, sorting and degradation
03018 RNA degradation
120424033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120424033
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120424033
03009 Ribosome biogenesis [BR:
cpii03009
]
120424033
03016 Transfer RNA biogenesis [BR:
cpii03016
]
120424033
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120424033
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
120424033
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
Pre-60S particles
RNases
120424033
Transfer RNA biogenesis [BR:
cpii03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
120424033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
120424033
NCBI-ProteinID:
XP_039443990
LinkDB
All DBs
Position
1:complement(95094202..95156585)
Genome browser
AA seq
1004 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIVECVEQKNTDDDGNVLYDDMTKPNPNKVEFDNLYLDMNGIIH
PCTHPEDKPAPRNEDEMMVAIFECIDRLMNIVRPRQVLYMAIDGVAPRAKMNQQRSRRFR
ASKEAAEKATEIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH
DRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML
GLATHETHFTIIREEFLPNKERPCDICQQMGHEMKDCAGLKSARDCERSPPPPGKETQFI
FVRLNVLKEYLAKELDMPNLPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR
LVTLYKKCVYKTKGYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRKVTEDRFKERNKRMK
MQKEREQRPKFDQMHNSQFAPTPLGRGQTPQAIVNPRQEAANFRMGGNNRNQQDSNQDNQ
RRGQKRKADDPISHAAAEEEPETPDEVRLWEDGFKDRYYESKFDVLPTNMKFRQTVAWEY
VRGLCWVLKYYYQGCASWEWYFPYHYAPFASDFRTLQNVNKHFDRGTPFKPLQQLMGVFP
AASRSHVPPAFAELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATD
PKVPELTQEERLRNENGLARLYLCSGSEAYRTARALYANEVDYEREVPVLAGCMRGLIIP
TQENIQQDGVLPSPIPGLHPVCENKVLTLKFLDPQYDDDFIFPARKLDGAKDQPRVLGAN
EGPVVGFGPRTDRGRLGQSGHRMMNHYTGGRGRGGGGGGGGGGGGGGGGYNNYSRDGNNS
YNSSYNNSSYNSSFNSSSGSNSNNYNNSGNNSRGSGSGGGGGGNLSVFEQLSSRINEYQQ
QVMSDISRDASSSGVMLPNPFANQVRYDYNTGGGGGNNRQNNYQNNRGGYNNQRGGGGRG
GYQNNNQGGGGGYGGQRFNNNGQGGGGNRNNFGANRFNNNRRNY
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcatttttccgctggttatcgcgcaaatatcccagcgttatcgttgag
tgcgtggagcaaaagaacaccgacgacgatggcaacgtcctgtacgacgacatgaccaaa
ccgaaccctaataaggtggagtttgacaacctgtatctggacatgaacgggatcatccat
ccgtgtacacatccggaggataagccggcgccgcggaacgaggacgaaatgatggtggcc
atcttcgagtgcatcgatcggctgatgaacattgtccgtccgcggcaggttctgtacatg
gcgattgatggggtggcgccgcgcgccaagatgaaccagcagcgatcgcgacggttccgg
gcgtctaaggaagcggcggagaaggcgacggaaattgccaagatccgggaggagttggcc
gcgaaggggtgcatcttgccgccggagaaggaaaagggagcgcactttgattcgaactgc
attacgcccgggacgccgtttatggaccggctgagcaagtgtctgcagtactacgtgcac
gaccggatgaacaacaatcccgggtggaaggggctgaaggtcatcttgtcggacgcgaac
gtgcccggcgagggcgagcacaagatcatggactacatccggaagcagcgcgcccagccc
gaccacgacccgaacacgcaccacgtcctgtgcggtgccgacgccgatctgatcatgttg
ggcctggcgacgcacgagacgcactttaccatcatccgggaggagtttctgccgaacaag
gagcggccgtgcgacatctgtcagcagatgggccacgagatgaaggactgcgcggggttg
aagtcggcacgggactgcgaacggtcaccgccacctccgggcaaggagacgcagttcatc
tttgtgcggttgaacgtactgaaggagtacctggcgaaggagctggacatgccgaacctg
ccgtttacgtacgactttgagcgcgtcattgacgattgggtgtttatgtgcttcttcgtg
ggaaatgactttttgccgcatttgccgagtctggagattcgggagaacgcgattgatcgg
ctggtcacgctgtacaaaaagtgcgtctacaagaccaagggctatctgacggactccggg
gacgtaacgcttgatcgcgtcgaactgatcatgacggatttgggctacgccgaggacgaa
atcttccgcaaccgaaaggtcaccgaagaccggttcaaggagcgcaacaagcgcatgaag
atgcaaaaggaacgcgagcagcgccccaaattcgatcagatgcacaactctcagttcgcg
ccgactccgctcggccgcggccaaaccccgcaagccatcgtgaacccacgccaagaggcg
gccaacttccgcatgggcggcaacaaccgcaaccagcaggactccaaccaggacaaccag
cgccgcggccagaaacgcaaagccgacgatccaatctcgcacgcagccgccgaagaagaa
ccggaaacccccgacgaagtccgcctctgggaggacggcttcaaagatcgctactacgag
tccaagttcgacgtgctccccaccaacatgaagttccgccaaaccgtggcctgggagtac
gtccgcggcctctgctgggtcctcaagtactactaccaaggttgcgccagctgggagtgg
tacttcccctaccactacgccccattcgcgtccgatttccgcaccctccaaaacgtcaac
aagcactttgaccgcggaaccccgttcaaaccgctgcagcagctgatgggggtgttcccc
gcggcgagtcggagtcacgtgccgccggcgtttgccgagctgatggtggatcccaagtcg
ccgattatcgacttttatcctattgattttcacatcgatttgaacgggaagaagtttgcg
tggcagggcgtcgcgctgctgccgtttgtcgacgagaagcggctgtttaaggccaccgat
ccgaaggtgccggagctgacgcaggaggaacgattacgcaacgagaacggccttgcccgg
ctgtacctgtgctcaggctccgaagcgtaccgcacggcccgcgccctctacgccaacgag
gtggactacgagcgcgaggtgccggtgctggccggatgcatgcgcggtctcatcattccg
acccaggaaaacatccaacaggatggcgttctcccttcgcctattccgggcctccatccg
gtgtgcgagaacaaggtgctcacgctcaagtttctggatccgcagtacgacgacgatttt
atcttcccggcccgcaagctggacggtgcgaaggatcagccacgggtgctcggcgctaac
gaaggccccgtggttgggttcggtccgcggacggatcgtggccggttaggacagtccggc
catcgcatgatgaaccattacacgggaggaagaggtagaggaggcggtggaggtggtggt
ggaggaggaggaggaggaggaggaggttacaacaattactcgagggatggcaacaactcg
tacaacagctcctacaacaactcgagctacaacagcagcttcaactcgtcctcgggcagc
aacagcaacaattacaacaactccggcaacaacagccgcggctccggttctggaggcggc
ggcggtggcaatctgagcgtgtttgagcagctgagcagtcgcatcaacgagtaccagcag
caggtgatgagcgacatttcgcgggacgcgtccagctcgggcgtgatgctgccgaatccg
tttgcgaaccaggttcggtacgattacaatactggcggcggaggaggtaataacaggcag
aataactatcagaataaccgcggtgggtacaacaatcagcggggaggagggggaagagga
ggttatcagaacaataaccagggtgggggaggaggttatggagggcagaggttcaacaac
aacggtcagggcggaggaggcaataggaacaactttggggcgaaccgtttcaacaacaat
cggagaaattactag
DBGET
integrated database retrieval system
