Culex pipiens pallens (northern house mosquito): 120424156
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Entry
120424156 CDS
T07310
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120424156
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
120424156
3'-5' decay
Other 3'-5' decay factors
120424156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ResIII
AAA_19
PAM2
zf-CCCH
AAA_22
zf-C2H2_2
UvrD-helicase
PhoH
AAA_14
AAA_24
zf-C2H2_4
YfiO
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120424156
NCBI-ProteinID:
XP_052564594
LinkDB
All DBs
Position
2:133668314..133681585
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AA seq
2105 aa
AA seq
DB search
MSESQASEHLRNRQWQQAKDIYDQLLSESSPGSFKLPKERTIACLYGRTECCLELKEYES
VAHDCHCLLKLLANNNESRASGSTSPVPSSASSTSSTSSSSTANQQNPTATTESKVRKRL
IHSLYKQQKYAEAEVILQEWAANHNYHQDINRYLERLKSVLQMASANSSPTPALDGSASA
APPAATADSDTSSLSQGPSTTPTSTISSLSSLNEEYEQIETKLENLIINNLPPDRYTKQL
SQLNNNGSSDSSSPTRENNKSSSEREAEAGETTVSNGNAEVDVASTTAADTNEQEAVKPE
EGETSESAAPATSSANSSSSSVNNFQKQLDKISNISCVYCTMNFSDRSELRAHCQTQSHQ
NIIMSDEGRDWMWRPPPRGFIAESYSLCENFVDNQSCHYGNQCVEAHGIDELNEWKERFE
YRKKKLQRARDKELYGKSYTEQLLERWVLAPSPDKVMKEKVEGVEESCSQDLVTTVSSKV
SKREWTFVLKTRRLLKAVALLQDAHRNHFLIKQIYPGEPRSGRPAGNKVVEAELTSDQEW
VAPMDAPKVEAIEPSSPMLEHRVKVVFNTDIYGTFRQAVVFDFGSEPVLVKHICVDVVPV
TEVDKIQEIRKDIVMSTSERWDETNSEIIEFTTTIIPHMQTPAYAADAEREKELLARYPL
PKASSFVLTQSTITEKKLTKNNYRNRIHELLYVEEIARYEQIARYNLTTRLTIATNYLLT
PSGMATSTAKYSHSGELFALMKLGKDVSEDTSAGRLILNNCQAVLIASKDPAPTGEKRKV
YEAVIEDKGKNMIYLKISAKAVAGLGLKAETEFISDIQFQPNRLTYCEWHHAIDKIADFR
IIFPDIYLEPSIPWTPQRQWDASLDPKLNSKQKEAVVAITTPITVALPPILLIGPFGTGK
TYTLAQAIKQLLLQPESKILICTHSNSAADLYIKDYLHPWVEEGMEEAKPLRVYYHKRWV
ATVNSIVQKYCLIDLNINVRNFRRPTVEDILKYRIVVVTLNISMELASLDLPKGHFTHIF
LDEAAQAMECEAIMPLALATEKTRIVLAGDHMQMSPELFSNFAKERKLHISLLERLYDHY
PNDFPCKILLCENYRAHEAIIKFTSELFYEQKLIASGKQPRHEKFYPLTFFTTRGEDVQD
KNSTAFYNNSEVYEVVERVCELRKKWPSSWGKINDQSIGIMTPYADQVFRIRSELRKRRM
GGISVERVLNVQGKQFRAIFLSTVRTRRTCNTNANENSSSSSSEDVDYGFLSNSKLLNTA
ITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICYQNKSLFGITWSLLRSQLDGVELKKT
YVLNPLAPEFIPRALQAEAYLREQAANVTGQYLQQPPHQAGPHSTGFHHQSNANYSGGGH
PSLPAAGLMRQIVPQQPMPTPQAPFMGHGPGPGGGHGGHPPIPPQTQQQFPPYQSPMFFA
AQQPPMRGPPPPHPNALGPPVPPNIAAQAGPANFPQNNPANLWNPAGSGHFPNRTRQQIR
PQMAQHLTASGRPLIPPPMRSPVQQQQQQQQQQQQQLSAPQMPYLQQPKPALPNYGPFPP
HHQPQHPPHQLHQNHIRPVMGGGGGGGGGGGPISPSSYQQQQQQQDQQHYLSGLSTDLMA
SITARAASQMQMPPQQQQQQVVAAVHQQQSLLHQQQSQQKFGALRMDDGRQQQQQHGGLV
DKDIQFLQNVHFPEKYSQVTPPQHVHHSNPAAVTDFNHLLPPNMSFLDVSLQTKEFQYLW
FIKLVETQGLEAANKFTDILRQVPTLASTQHPHQQQQQPQPQHHHQQVHPQQQQQQQLQK
KMNPVLPSHTDMILDNFLNPSKDVLGSVSLQPPAALLHHQQQQQHQQMAVASSGISNGNA
LLGGGMPGKSLLENVELFGPASELQSFGGSSAPLVAAPQPQQQQSVPLYRRQAGQNYQSS
SSGTLPSASNSSQSIASSTPDLLDNHLQQSLFETLDGPGKLHHSNAMLFGGQFGGGGSTT
DQSNNLQGFTSIHNIAAGLMQQQHNLNNREFLHQLQQQQQQQQQQHLHDGRGGSSVEELL
NRQAANQTYASVLSQGGGKQKDGSGGGGLGGLGDGSGAGSSALGDPFAALRDLGRKSNGY
YNYFQ
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagtcaagccagtgagcatctccggaaccgacagtggcaacaggcgaaagat
atctacgatcagcttctgagcgagtcttcgccgggcagcttcaagcttccgaaggagcgt
acgatcgcatgtctgtacggtcgcaccgagtgctgtctggagttgaaggagtacgagtcc
gttgcccacgattgtcactgtttgctgaagcttctggcgaacaacaatgaaagccgtgct
tcgggttctacgagtcccgttccgtcttcagcgtcatcgacatcttcgaccagcagttcc
tcgacggccaatcaacaaaatccgacggccacgacagagtcgaaggtccgcaagcgtctc
atccattcgctttacaaacagcaaaagtatgccgaagcggaagtaattctgcaggagtgg
gccgccaaccataactaccatcaggacatcaatcgctacttggagcgcttaaaatccgtg
ctacaaatggcatcggccaactcgtcacctacgcccgctctcgacggatctgcttcggca
gcacctcccgctgctacggcagattccgacacgtcgtcgttgtcgcagggaccgtcgacg
acgcccacttcgaccatctcttcactgtcttcgctcaacgaagagtacgaacagatcgag
acgaagctggaaaatctcatcatcaacaatctgccgcccgatcggtacaccaagcagttg
agtcagctgaacaacaacggcagcagcgattcgtcgagtccgacgcgggagaacaacaag
tcgagcagcgaacgggaagcggaagccggtgaaaccacggttagcaatggcaatgcggaa
gtcgacgtcgcttcgacaacggccgcggacacgaacgaacaggaagctgtgaagccggaa
gaaggtgaaacgagcgaatccgcggctccagcgacgagcagcgccaacagcagcagttcc
tcggtcaacaactttcagaagcagctagataagatcagcaacattagctgcgtctattgt
acgatgaactttagcgaccggtccgagttgcgggcgcattgccagacgcagagccaccag
aacattatcatgtcggacgaaggtcgtgactggatgtggcgtccgccgccgcgtggcttc
atcgccgagtcgtacagcctgtgcgagaacttcgtggacaaccagagctgccactacggc
aatcagtgcgtcgaagcgcatggtatcgacgagctgaacgagtggaaggaacggttcgag
taccggaagaagaagctgcagcgcgcccgggacaaggaactgtacggcaaaagctacacc
gagcagctgctggaacgctgggtgttggcaccaagcccggacaaggtgatgaaggagaag
gtggagggggttgaggagtcgtgctcgcaggatctcgtcacgacggtcagctccaaggtg
agcaaacgcgagtggacatttgtactgaaaacgaggagactgttgaaggcggtagcattg
ctgcaggacgcgcatcgcaatcattttcttatcaagcaaatctatccgggcgagccgaga
agtggccgtcccgcgggcaacaaagtggtggaagccgagttgacgtccgaccaggagtgg
gtcgcaccgatggacgcaccaaaggttgaggcgattgaaccgagcagtcccatgctggag
caccgggtcaaggtggtgttcaacacggacatttacggtacgttccgccaggcggtggtc
ttcgactttggcagtgaaccggtgctggtgaagcacatctgcgtcgacgtggtccccgtt
acggaggtcgacaagattcaggagatccgtaaggacattgtgatgtcaacgtcggaacgg
tgggacgaaaccaactcggagataatcgaattcaccaccaccataattccgcacatgcaa
actccggcttatgccgcggacgccgagcgcgaaaaggaactgcttgcgagatatccactg
ccgaaggcatcgtcctttgtgctgacgcaatccacgatcacggagaagaagctgacgaag
aacaactaccgaaatcggatccacgagctgctgtacgtggaggagattgcccgttacgag
caaattgcccgctacaacttgaccacccgattgacgatcgcgaccaactatctgttgacg
cccagcggaatggccaccagcacggccaagtattcccactctggtgagctgtttgcgctg
atgaagctcggcaaggacgtctccgaggacacttcggccggtcggctcatcctgaacaac
tgtcaagccgtgctgattgcttcgaaagacccggctcccacgggtgaaaagcgcaaggtg
tacgaagccgtgatcgaggacaaagggaagaacatgatctatctgaagatttcggcaaag
gccgtggccgggctcggactgaaggcggaaaccgagttcatctcggacatccagtttcaa
ccgaaccgactgacgtactgcgagtggcaccacgcgatcgacaaaatcgccgacttccgg
atcatcttcccggacatctacctggaaccgagcatcccgtggactccgcagcgccaatgg
gacgcgtcactcgatccgaagctcaactcgaagcaaaaggaagcggtcgttgccatcaca
acacccattacggtcgcgctgcctccgatcctgctgattggaccctttggcaccggcaag
acgtacacgctggcgcaggccatcaaacagctgctgctgcagccggagtcgaagattctc
atctgcacccactcgaattcggccgccgatttgtacatcaaggactacctgcacccgtgg
gtcgaggagggcatggaggaggccaaaccgttgcgcgtttactaccacaagcgatgggtc
gccaccgtcaacagcatcgtccagaagtactgtctgatcgacctgaacatcaacgtgcgc
aacttccggcggccaaccgtggaggacatcctcaagtaccgcatcgtggtggtcacgctg
aacatttcgatggagctggcttcgctggatctgcccaagggacactttacgcacatcttc
ctggacgaagcggcccaggccatggagtgcgaggcgatcatgccgttggcgctggcgacg
gagaagacgcgcatcgtgctggccggtgaccacatgcaaatgtccccggagctgttttcg
aactttgccaaggagcgcaagttgcacatttcgctgctggagcggctgtacgatcactac
ccgaacgatttcccgtgcaagatcttgctgtgcgaaaactaccgagcgcacgaggcgatc
atcaagtttacgtcggagctgttctacgagcagaagctgatcgcgtccggcaagcagccg
aggcatgaaaagttctacccgttgacgttcttcacgacgcgtggcgaggacgtgcaggac
aagaactcgacggcgttctacaacaactcggaggtgtacgaggtggtggagcgggtgtgc
gagctgcgcaagaagtggcccagttcgtgggggaagattaacgaccagagcattggaatc
atgacgccgtacgcggatcaggtgtttcggattcggtccgagttgaggaaacgtcgcatg
ggtggaatcagcgtggagcgagtgctgaacgtgcagggtaagcagttccgggcgatcttt
ctgtccacggtgagaacgagacgcacctgcaacacgaacgccaacgagaacagcagcagc
agctcttcggaggacgtggactatggctttctcagcaattccaagctgctgaacacggcc
atcactcgtgcccagagtctggtcgccgttgttggagatccggttgcgctgtgttcgatt
ggacggtgtcgaaaggtgtgggaacggttcatcgagatctgctaccagaacaagagtctg
tttggcatcacttggtccttgctgagatcgcagctggatggggttgagctgaagaagacg
tacgtgcttaaccccctcgcgccggaatttattccccgtgccctgcaagccgaggcgtac
ctgcgggaacaggcggcaaacgtgaccgggcagtatctccagcaaccaccgcaccaggcc
ggaccacactcgaccggattccatcaccaatcgaacgcgaactactccggcggaggacat
ccgtcactgccggcggcaggactcatgcgacaaatcgtgccccagcaaccgatgccgacg
ccgcaggctcccttcatgggacacggacccggtcccggtggtggccacggtggtcatccg
ccgattccgccccaaacgcagcaacagttcccgccctaccagagtccgatgttctttgcg
gcgcagcaaccgccgatgcggggtccaccgccaccgcatccgaacgccctcgggccaccg
gttccgccgaacattgccgcccaggctggtcccgccaatttcccccagaacaacccggcg
aacctgtggaaccccgctgggagtggtcattttcccaacagaacccgccagcagattcgt
ccccagatggcacagcacctgacggccagcggccgaccgttgattcccccaccgatgcgg
agtccggtccagcagcagcagcagcagcaacagcaacaacaacagcagctgtctgcgccg
caaatgccttatctccagcagccgaagccagcccttccgaactacggcccattcccgccc
caccaccagccccaacatccgccccatcagctgcaccagaaccacattcgcccggtgatg
ggagggggtggcggcggcggcggaggaggcggtcccatcagcccaagttcgtaccaacag
caacagcagcagcaagatcagcaacattacctttccggcctgtctaccgacttgatggca
tcgattacggcccgtgccgcttcgcaaatgcaaatgccaccacagcagcagcagcagcag
gttgtggcggcggtgcaccaacagcaatcgctgcttcatcaacagcagagccagcaaaag
tttggggcgcttcggatggacgacggacggcagcagcagcagcagcacggtgggctcgtc
gacaaggacattcagtttctgcagaatgtgcactttccggaaaagtacagccaggtcacg
ccgccgcagcatgtgcaccattccaacccggccgccgttacggactttaaccacttgctg
ccgcccaacatgagctttctggacgtgtcgctgcagacgaaggagttccagtatctgtgg
ttcatcaagctcgtcgagacgcaggggttggaggcggctaacaagttcacggacattctg
cgccaggttccgacgctggcgtcgactcagcacccgcatcaacagcagcagcagccgcag
ccgcaacatcaccatcaacaggttcacccgcagcagcagcagcagcaacagttgcagaag
aagatgaacccggtgctgccgtcgcacaccgacatgatcttggacaactttttgaacccc
agcaaggacgtgttgggttcggtcagtttgcagccaccggcggccttgctgcatcatcaa
cagcagcagcaacatcagcagatggcggtggcctccagtggaatcagcaacggaaatgcc
ctgctcggaggagggatgccggggaagagcttgctggagaatgtggaactgtttggcccc
gccagcgagttgcagtcgtttggtggctcaagtgcaccgttggtcgccgcgccccagccc
cagcagcagcagtcggttccgctgtaccgtcgtcaggctggccagaactatcagagcagc
agcagcggtacgctcccgtcggcgtccaactcgtcccaatcgattgcctcgtcaacgccg
gacctgctggacaaccatctgcagcagtcgctgtttgaaacgctcgatggaccgggcaag
cttcaccacagcaacgccatgctgtttgggggtcagtttggtggcggcggctccacaacc
gaccagtccaacaacctgcagggcttcacctcgatccacaacattgccgccggtctgatg
cagcagcaacacaatctcaacaaccgcgaattccttcaccagctccaacaacagcaacaa
cagcagcagcaacaacatttgcatgacggtcgcggaggttcgtccgtggaagaactgctc
aaccggcaggccgccaaccagacgtacgcgagcgtgctcagccagggcggtggcaagcaa
aaggacggaagtggcggcggcggcctcggtgggctcggcgacggcagcggcgcgggctcg
tccgccctgggcgatccgtttgcggctctgcgcgatctgggccggaaaagtaacggctat
tacaactactttcagtaa
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integrated database retrieval system
