KEGG   Culex pipiens pallens (northern house mosquito): 120424471
Entry
120424471         CDS       T07310                                 
Name
(RefSeq) RNA polymerase II elongation factor Ell isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120424471
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpii01009]
    120424471
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpii03021]
    120424471
Protein phosphatases and associated proteins [BR:cpii01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120424471
Transcription machinery [BR:cpii03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120424471
    Little elongation complex (LEC)
     120424471
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 120424471
NCBI-ProteinID: XP_052564310
LinkDB
Position
2:198907953..199041363
AA seq 736 aa
MAALCAGNYGLTQQHSGSSGAGDNKELIFVKLTDSALRAIEEFQRNQLKLGGSLNPSIQF
VNGQGHLSFPSHNGNNVQKFSFSLADIEGGGTLECVQQTTGQPLQNIGHIQHKMRIHAND
DVYETTRHRMAAAEETKKDKCTREIKPNQTDIGRKVKLKNPTTRISNIPPSSNSVLSKRD
SSNNTYNNHSSSTTNNNHISNNNSSSGAGVINNNSNSSLSVASANNNHNSSSNNNNNHNS
NHLLSNGNSHSNHVANNVINHNNNNNNNSSSYNNLSTSPKLAAAAKSNGLQQQHNNHLHH
NNNNNHSVNNQSSGVTLQQQHKPGYQPTVHDPPYQQSQQKSENGTARGTNGRTQHGKPEI
MKRNIRERLIHLLALRPYKKPELYAKLAQDGIRGQEKNCIAQALKAIASMRDNVYYLHRH
MWNDVQEDWPFYSEQDRQTLKRRKPQNLTPPLSSDGGSSTSGQSPSSAHNGSSPPSGSKR
PSIAGDEGGAAGAMPTAKKPRISHYKKDILPDINRRGVTDSRDTSNMNPRSRPHDSNRSS
NYYHHHGSNVTPNAQESEDSGVSLSYSLVPNDVAKRIQHSAGDVMVADTLVISDRDNYDD
QISAYREETKKVKSLKDDFSDQFTRITTVEQRRKYKTEFDNDFQEYRRLHEIVERVSRKF
AQLEEDLQHQRNNERRYKEIQRQIIKEYDESIKDNRFQETKQRFNYLHSKLSHIKHLVHD
YDVAITNGLCRPQENY
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggccgccctgtgcgctggcaactatggactgacccagcagcactccggcagctccggc
gccggcgacaacaaggagctcatcttcgtcaagctgaccgactcggccctgcgggccatt
gaggagtttcagcggaatcagctcaaactgggcggctcgctcaacccgtcgatccagttc
gtcaacgggcagggccacctgtcctttccgtcccacaacggcaacaatgtgcaaaagttt
agcttctcgctcgcggacatcgagggcggcggcacgctcgagtgcgtccagcagacgacc
ggccagccgctgcagaacatcggccacatccagcacaagatgcggatacacgcgaacgac
gacgtgtacgagacgacgcggcaccggatggccgcggccgaggagaccaaaaaggacaaa
tgtacaagagaaatcaagcccaatcaaaccgacataggacgtaaagtgaaattaaaaaat
ccaaccactcgtatcagcaacattcctcctagtagtaattcagttttaagcaaacgtgat
tctagcaacaacacttacaataaccatagtagcagcaccaccaacaacaaccacatcagc
aacaacaacagtagtagtggtgccggtgtcatcaacaacaatagtaatagtagtctctca
gtcgcctccgccaacaacaaccacaacagcagcagcaacaacaacaacaaccacaacagc
aaccatctgctgagcaacggcaacagccacagcaaccacgtcgccaacaacgtcatcaac
cacaacaacaacaacaacaacaacagcagtagctacaacaacctctcgacatcaccaaaa
ctagcggcggcggcgaaaagcaatggcctgcagcagcagcacaacaaccacctccaccac
aacaacaacaacaaccacagcgtcaacaaccagtcctccggggtgacgttgcagcagcag
cataaaccgggctaccagccaacggtgcacgaccctccctaccagcagtcccagcaaaag
tctgaaaatggcacggcgaggggcaccaacggccggacgcagcacggcaagccggagatt
atgaagcggaatattcgtgagaggttaatccacttactagcactaaggccatacaagaaa
ccagaactgtacgccaagttagcgcaagacggtatccgcggccaggagaagaattgcata
gcgcaggccctcaaagcgatcgcgagcatgcgggataacgtgtactacctgcaccggcac
atgtggaacgatgtgcaggaggactggcccttctactccgagcaggaccggcagacgctc
aaaaggagaaagccccaaaacctaacccctccgctcagctcggacggcggctcgtcgacg
tcgggccagagtccgtccagtgcgcacaacggcagcagtcccccgtccggcagcaagcga
ccgtcgatagcgggcgacgagggcggggccgccggtgcgatgcccacggccaagaagccg
cggataagtcactacaagaaggacatccttccggacattaaccggcgaggtgtgaccgat
tccagggacactagcaatatgaacccacgctcgaggccgcacgacagtaaccgttcgtcg
aattactaccaccaccatggatccaacgtaaccccgaacgcgcaggaatcggaagacagc
ggcgtcagcctgagctactcgctcgtgccgaacgacgtggccaagcggatacagcactcg
gccggggacgtgatggtggcggacacgctggtgatctccgaccgggacaactacgacgac
cagatcagcgcgtaccgggaggaaacgaagaaggtgaagagcctgaaggatgactttagt
gatcaatttactaggataaccacggtggaacaacggcgtaaatacaagactgaatttgac
aacgattttcaagagtaccggcggctgcacgagatcgtcgagcgggtgtcgcggaagttt
gctcagctggaggaggacctgcagcaccagcggaataacgagaggcggtacaaggaaatt
caacggcaaataattaaggagtacgacgagagtataaaggacaaccggtttcaggaaacg
aagcaaaggttcaactatctgcacagcaaactatctcacatcaagcatctcgtgcacgac
tacgacgtcgccatcacgaacggcctgtgtcgaccgcaggagaattactga

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