Culex pipiens pallens (northern house mosquito): 120425882
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Entry
120425882 CDS
T07310
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120425882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120425882
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120425882
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120425882
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120425882
U7-dependent histone pre-mRNA processing factors
120425882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120425882
NCBI-ProteinID:
XP_039446436
LinkDB
All DBs
Position
3:132842403..132852705
Genome browser
AA seq
1173 aa
AA seq
DB search
MDNFLLRSSSFEAASLFTNEKIASARGKIVEALNESLTAGSAQKCEIIAKVQELILHSDT
DLLLEFLENILAFGHDTNQDVRKTVAGFIEEVCKMNISLLPKVVNILFGLLRDAAPSVAK
RVIQGCGAIYKQALQWICGLSDITEEVEQAWNTLCLVKASILDMIDNDNDGIRTNAIKFL
EGVVILQTHPDEDSMKRENDFSLENVPLTLKIARRRKLEDEAVNIFDLLLQFHAASHISS
VNLIACTGTLCIIAKMRPSMMNQVVEALKNLHSNLPPTLTNSQVSSVRKNLKMQFLNLIK
HPACYEHQTAIAQVLQDLGASNSEIGRAIPKLDKREQQRRAKRALENSMSSQLAAKKAKL
SEHMRREKERSAAAAVATPRQMEIDYDELNEQKARSNRLNEQFLTDHLQKLDVVTQLVLN
NLSKLPAEPNSFFNTGYVPLAPNVTVPQQIQRIAESFAKQLTDVRVGPGASAMTKEPPMR
PKISDDEERSIIRGRAGREADAEAVEELDEEEVDVDMERLPEDDRRKLEATRKLRETLER
VKGASGEPKMKQRVKVLRLQEVTKQQPVDLKHNFLNDAVKRILKAEKQALIGGAAFKRKR
IITVFGSHFMPSVRMLILDFILEEICKRIDLAFSWIFEEYSLLQGFTRHTYIKSESKADQ
PYTQLLLKLVTNIMDRENFREKESLLKRIYLEAPLLPDDVITILAYMCQLEELADCGMQI
SKDLLIRRPPKEKTFLDILLKHSVHDNAIIREKAIQNLIHIYSLHRILTDEMEQYALLWL
SYLEQEYPPEPVFANELGRSEHPRVWTDELAKACLGLFLEVLVYNQEMIHRLSHVYTKAT
SDMKRAVLRAIEAPVRKIGAESEELLKLIEECPKGSETIITRIIYILTEKTIPTPELVDR
VRILHQTKVSDVRLLIPVINGLTKKEILAVLPKLIKLNPVVVKEVFNRLLGIGAEITTSN
LPLSPAELLVALHTVDTAKVELKWVVKATSLCLAEKETYTHDVLGSVIQQLVELTPLPTL
LMRTVIQSLTLHPRLAGFVTNLLQRLIVKQVWKQKVVWDGFLKCAQRLTPQSLGILLQLP
ASQLQDALTICPEFREPMLEHAREIMEHQIGHVTQDRMDVLLGISSHSSADTADLQVVAP
KYGEEVPMQSHLPVLIKKEKDAERPEPAPPGMD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggacaactttctgcttcgcagcagcagcttcgaggcggcttcactcttcacgaatgag
aagatcgcctcggcccgcgggaagattgtggaggcgctgaacgaatcgctgacggcggga
agtgcgcaaaagtgcgagatcatcgccaaggtccaggagttgattctgcactcggacacg
gacttgttgctggagtttttggagaatattttggcgtttggccacgatacgaatcaggat
gtgcggaagacggtggcagggtttatcgaggaggtttgcaagatgaacattagtttgctg
ccgaaggtggtgaatattttgttcgggttgttgcgggatgcggcgccgagtgtggccaag
agggtgattcagggctgcggggcgatctacaagcaggcgctgcagtggatctgtggactg
tcggatattacggaggaggtggagcaggcttggaatacgctgtgcttggtgaaggcttcg
attttggacatgattgataacgataacgacggaatccggacgaatgcgatcaagtttttg
gagggggtggtcattctgcagacgcacccggacgaggacagtatgaagcgggagaatgac
ttttctttggagaacgttccgctgacgctgaagattgccagaaggagaaagttggaggac
gaagcggtcaatatcttcgatttgctgctgcaatttcacgccgcgtcgcacatttcttcg
gtgaatttgattgcgtgcacgggaacgctctgcatcatcgccaagatgcgtccctcgatg
atgaaccaggtcgtggaagcgttgaaaaacctccactcgaacctgccaccaacgctgacc
aattcgcaggtcagttcggtaaggaaaaacttgaaaatgcaattcctaaatctgatcaaa
cacccggcctgttacgagcaccaaacggcaatcgcgcaagttctgcaagatttaggagct
tcaaacagcgaaattggccgcgccatcccaaagttggacaagcgcgagcagcaacgccgt
gccaagcgcgccctcgagaactccatgtcctcccagctggcggccaaaaaggccaaacta
agcgagcacatgcggcgggagaaggaacgatccgctgcagcggcggtcgcaactccacgc
caaatggaaatcgattacgacgagttgaacgagcagaaagcgcgctcaaaccgactcaac
gagcaatttctcacggaccacctgcaaaagctcgatgttgtgacgcagcttgttctcaac
aatctgtccaaactccccgcggaacccaactccttcttcaacactgggtacgtcccactc
gcaccgaacgtgaccgtcccccagcagattcagcgaatcgccgaatcgttcgccaagcaa
ttgaccgatgtgcgcgtgggtccgggcgcgtccgccatgaccaaagaaccgccaatgcgg
cccaaaatcagcgacgacgaagagcgcagcattatcagaggacgcgccggtcgcgaagcg
gacgctgaagccgttgaagaactggacgaggaggaggttgatgttgacatggagcgcctc
ccagaagatgatcggcgcaagcttgaggcgacacgaaagttgcgcgaaacgctggagcga
gttaagggcgcgtccggcgagccaaaaatgaagcagcgcgtcaaagtgcttcgtctgcag
gaggtcaccaagcagcagccggtcgacctgaaacacaacttcctgaacgacgccgtcaag
cgcatattaaaagcggaaaagcaagccctcatcggcggagcagccttcaagcgcaaacgc
atcatcaccgtgttcggctcccacttcatgccctccgtccgcatgctcatcctggacttt
atcctcgaggaaatctgcaaacgcatcgacctcgccttctcctggattttcgaagagtac
agcctgctgcaaggcttcacccgtcacacctacatcaagtccgagtccaaagccgaccaa
ccgtacacccaactcctcctcaaactcgtcaccaacatcatggaccgggaaaacttccgc
gaaaaggagtccctcctcaagcgcatctacctcgaagccccccttctccccgacgacgtc
atcaccatcctcgcctacatgtgccaactcgaggaactcgccgactgcggcatgcaaatc
tccaaggacctcctcatccggcgtcccccaaaagagaaaaccttcctcgacatcctcctg
aagcactccgttcacgacaacgccatcatccgcgaaaaagcaatccaaaacctgatccac
atctactccctccatcgcatcctcaccgacgaaatggaacagtacgccctactctggctg
tcctacctggagcaggaataccccccggaaccggtgttcgcgaacgagctcggacgctcc
gaacatccccgcgtttggacggacgaactggcgaaagcctgtctcggcctgtttctggaa
gttctggtctacaaccaggagatgatccaccggctgtcgcacgtgtacacgaaggccacc
tcggatatgaagagggcggtgctgagggcgattgaggcgccggtgaggaagatcggggcg
gagagtgaggagctgctgaagctgattgaggagtgcccgaaggggtcggagacgatcatc
acgaggattatctacattctgacggagaagactatccccacgcccgagctggtcgaccgc
gtgcgcatcctgcaccaaacgaaggtgtccgacgtgcgccttctcattccggtcatcaac
gggctcaccaagaaggaaattctcgccgtgctgcccaagctgatcaagctgaatccagtc
gttgtgaaggaggtgttcaaccggctgctcggcatcggcgccgaaatcaccacctcgaat
ctgcccctttcgccggcggaacttctcgtcgcgctgcacaccgtcgacacggccaaggtc
gagctgaagtgggtcgttaaggccacctcgctgtgtctggccgagaaggagacgtacacc
cacgacgtactcggcagcgtcatccagcagctggtcgagctgaccccgctgccgacgctg
ctcatgcgaaccgtcattcaatcgctcacgcttcatccgcggctggccggcttcgtgacg
aatctgctgcagcggctgatcgtgaagcaggtgtggaagcagaaggtcgtctgggacggg
ttcctcaagtgcgcccaacggctgacgccgcagagtttgggcattctgttgcagctgccg
gcgtcgcaactccaggacgcactcaccatctgtcccgagttccgggaacccatgctggag
cacgcgcgcgagattatggagcaccagattgggcacgtcacgcaggaccggatggacgtg
ctgcttgggatttcttcgcacagttcggcggacacggccgacctgcaggtcgttgcgcca
aagtacggcgaggaggttccaatgcagtcccatctgccggtgttgatcaagaaggaaaaa
gatgcggagcggcccgagccggcaccgcctggaatggattag
DBGET
integrated database retrieval system
