Culex pipiens pallens (northern house mosquito): 120426578
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Entry
120426578 CDS
T07310
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii04140
Autophagy - animal
cpii04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120426578
04148 Efferocytosis
120426578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpii04131
]
120426578
Membrane trafficking [BR:
cpii04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
120426578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120426578
NCBI-ProteinID:
XP_039447297
LinkDB
All DBs
Position
3:complement(185498410..185505844)
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AA seq
894 aa
AA seq
DB search
MHEAYILYPPEKIPVQIESMTGFENKLILGTRQGHLLMYSFEPNQETNKLDLQLLQYDKN
FSKKPITQIEAIPEYKLIFSLSDGVVNVHDYSRHGFPLMHTAQKTKGATVFALDIKKSKS
LTGELIVLVRLAVAAKRKLQCYYWKQNTLLEFGNDIDLNDVPKTIAWNNNHICVGFKTEY
VMYDISGEQPKKIDLFPTSSSKSIEPCISLIEDDIFAVAKDEYLVTVYTEKYKTDGKENN
TGLVKPDASLLTTKDTRNLKSLIWSEPFQGLVWDEPYIIGLITDAIEVRVFDNLDMSDKG
LLIQTIPQLQKARFLARGKKGLLYVASVSHLWCIQAVEISKQREHLLQEENFHLALQLTN
ISDESPEFKATKINEIQTRHAYNLFINKHFRESMKEFSKLNTDPIDVIRLFPDLLPDSGK
NKLSSYSKKPAPVLDEKDIENGLVALIDYLTEIRYSLRQDLVNKTDSKLSAGKNISALLS
IIDTTLLKCYLQTSDSMVASVLRMNYCYLEESERVLKKYDKYVELIILYQTKGQHKRALQ
LLQAQAETLGSPLYGHDRTIQYLQHLGHENKNLIYEFAGWVLEKHPDDGLKIFIEDIPEV
ENLPRAEVLDFLLKDHKQLVVRYLEHIINVWNEQKALFHNILIQQYREKLIALKTDPDIE
SDVQKKTARDTINSKLLAFLRKSKLYHAEKVLGEFPYTDLFEARAIILGRLGKHEKVLAI
FVQLLGDFDKAVEYCDETYDSDDPKSSDVYVTLIKTILTPPSAPPYSDLELHPRCLKPDI
DTVLAIMEKNAKKINPYSVLQILPDDIPLASIKNFLEIALNHHLERKRKTQILKGLYYAE
HLQTHEQKIHYESRHFLVTELSVCPVCKKKFSYQSAFVRTPEGSIVHFSCQDKI
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaggcgtacattttatacccgccggagaagattccggtgcagattgagtccatg
acgggatttgaaaacaagctgatcctcggaacccggcagggccacctgctgatgtactcc
ttcgagccgaaccaggaaaccaacaagctggacctgcagctgctgcagtacgacaagaat
ttcagcaaaaagccaatcacccaaatcgaggccattccggagtacaaactcatcttcagc
ctgtccgacggggtggtcaacgtgcacgactacagccggcacggcttcccgctgatgcac
acggcccagaagaccaagggggcgaccgtgtttgcgctggatattaagaagtcaaaatcg
ctaacgggagaactgattgtgctggttcggttggcggtcgcggcgaaaaggaagctgcag
tgctactactggaagcaaaacacgctgctggagtttggcaacgacatcgatctgaacgat
gtgccaaagacgatcgcctggaacaacaaccacatttgcgtcggcttcaagactgagtac
gtgatgtacgatatttcaggagagcaacccaaaaagattgacctcttcccgaccagctcg
tccaagtcgatcgaaccctgcatttccctgatcgaggacgacatctttgccgtggcaaag
gacgaatacctggtcaccgtttacacggaaaagtacaaaaccgacggcaaagagaacaac
accggattggtgaagccggacgcatccctgctcactacgaaggacacccgcaacctaaag
tccctcatctggagcgaaccattccaagggttggtgtgggacgagccgtacatcattggg
ctgataaccgacgccatcgaggtgcgcgtgttcgacaacctggacatgtccgacaaggga
ctgctcattcagaccattccgcagctgcagaaggctcgctttttggcacgtggcaagaag
ggtctgctgtatgtggcgtcggtctcgcacttgtggtgcattcaggccgtggagatttcc
aaacagcgcgaacatttgctgcaggaggagaacttccatctggcactgcagctgacgaac
atctccgacgaaagcccagaatttaaagcgacaaagataaacgaaattcaaacccgtcac
gcgtacaacttgttcatcaacaagcactttcgcgagtcgatgaaggaattctccaaactg
aacacggatccgatcgacgttattcggctgtttcccgacctgctgccggacagcggaaag
aacaagctcagttcgtactcgaaaaagccagcgccggtgctggacgaaaaggacattgaa
aatggactggttgcgctgattgactacttgaccgagatccggtacagtctgcggcaggac
ttggtgaataaaaccgattccaaactttctgctgggaagaacatctctgcgctgctgtca
atcatcgatacaacgcttttgaagtgttatttgcaaacgagtgattcgatggtcgcctcg
gttctacgcatgaactattgctacttggaggaatccgagcgagtgttgaaaaagtacgat
aaatacgtggaactcatcatcctgtatcaaaccaaaggtcagcacaagcgagcactgcag
ctgctgcaggctcaagctgaaactcttggatctccgctgtacgggcacgatcgaacgatt
cagtatttgcagcatttaggccacgaaaacaaaaatctgatttacgaattcgccggttgg
gtgttggagaagcatcccgacgacgggctgaaaatctttatcgaagacattcccgaggtt
gagaatctgccgcgtgcggaggtgttggacttcctgctgaaggaccacaaacagctggtt
gttcgctatctggagcatattattaacgtttggaacgagcagaaggcgttgttccacaac
attttgatccagcagtaccgggagaagctgattgccctcaaaaccgaccccgatattgaa
agtgacgttcaaaagaaaaccgctcgggatactatcaacagtaaactgcttgcttttctg
cgtaaatccaagctctatcacgcggagaaggttctgggagagtttccctacactgacctg
tttgaagcacgcgccattattctaggtcgattgggcaaacacgaaaaggttctcgccatc
ttcgtccaactgctcggcgacttcgacaaggccgttgagtactgcgacgaaacgtatgac
agtgacgaccccaaaagctccgacgtgtacgtcaccctcatcaaaaccatcctcacaccc
ccgagcgccccgccctacagcgacctggagctgcacccgcgctgcctcaaacccgacatc
gacaccgtcctggccattatggagaagaacgccaaaaagatcaacccgtactccgttctg
caaatcctgccggacgacataccgctggcgtcgatcaagaactttctcgaaatcgccctc
aaccatcacctggagcggaagcgcaaaacgcagatcctgaagggactgtactacgcggaa
catctgcagacgcacgagcagaagatccactacgagtcgaggcactttctcgtgaccgag
ctgagcgtgtgtccggtgtgcaagaagaagtttagctaccagagtgcgttcgtgaggacg
ccggaaggcagcattgtgcacttttcgtgccaggataagatttga
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