Culex pipiens pallens (northern house mosquito): 120426688
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Entry
120426688 CDS
T07310
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03030
DNA replication
cpii03420
Nucleotide excision repair
cpii03430
Mismatch repair
cpii03440
Homologous recombination
cpii03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120426688
03420 Nucleotide excision repair
120426688
03430 Mismatch repair
120426688
03440 Homologous recombination
120426688
03460 Fanconi anemia pathway
120426688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpii03000
]
120426688
03032 DNA replication proteins [BR:
cpii03032
]
120426688
03400 DNA repair and recombination proteins [BR:
cpii03400
]
120426688
Transcription factors [BR:
cpii03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120426688
DNA replication proteins [BR:
cpii03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120426688
DNA repair and recombination proteins [BR:
cpii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120426688
MMR (mismatch excision repair)
120426688
DSBR (double strand breaks repair)
HR (homologous recombination)
120426688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
120426688
NCBI-ProteinID:
XP_039447398
LinkDB
All DBs
Position
1:complement(105808335..105810707)
Genome browser
AA seq
615 aa
AA seq
DB search
MSFNGLLSTGCIAEIMRGVEMEKSVVQILGSKRIAGSGEQAERYRLLISDGQYLYSFAML
ATQLNEMHHSGQLAEFTVIRIDRFITSVVNRNERGEKRVLIILDLTVVKPGSAVGVKIGN
PQPLTEGGNPSGGAASSGAPARTESAGAVSNGSSYQNRLNSSVSASNSTQSSLQESLTHP
INSLSPYQNKWVIKARVMSKSAIRTWSNAKGEGKLFSMDIMDESGEIRVTAFKEQCDKFY
DMIEADKVYYITKCQLKPANKQYSTLKNDYEMTMSNETIIQECKDVDASMPGIQYNFVPI
SQITNMEANAMIDVVGVCKEASELNTFTAKSSGRELTKREVTMVDSSNAAVQLTLWGADA
QNFPTSTNPVVVVKGARVTEFGGGKSLGLVGGSVMKLNPDIDVAHKIRGWYDNGGCDAVI
NSVSTRTGAAGGSYSTEWMTFHETKEKNLGHGDKPDYFQVKALVHNIKSGNAVYKACPQT
DCNKKVVDQDNGQYRCEKCNADFPNFKYRLLVNMLVGDWTSNRWVTVFTELGEQMLGKTS
QEIGDALEYNKDEAEQIFSNISFASFIFKLRTKVEFYGDAARNKTTAVAATPVNHKEYNA
YLVKNIQELTGIGKN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaacgggctgctttcgaccggctgcattgctgaaataatgcgcggtgtcgag
atggaaaagtcggtggtgcagattctgggctcgaagcggatcgccggcagtggcgaacag
gccgagcggtaccggctgctcatctcggacggtcagtacctgtacagtttcgcgatgttg
gcgacccagctgaacgagatgcaccactcaggtcagctggcagagtttaccgttatccgg
attgatcggttcatcacgtcggtcgtgaaccggaacgagcggggtgagaagcgagtgttg
atcattttggacttgacggtggtgaagccgggttctgcggttggggtgaagattggcaat
ccacagccgctgacggagggtggaaatccaagcggaggggcggccagttcaggtgctccg
gctaggacagagtcggccggagctgtgagcaacgggtcgtcgtaccagaatcgtctcaac
agtagcgttagtgcgtccaacagtacgcagagctcactgcaggaatcgttgacccatccg
atcaactcgctgagtccgtaccagaacaagtgggtcatcaaggcgcgggtcatgtccaag
tcggcgatccgcacctggagcaatgccaaaggcgaaggcaagctcttctcgatggacatt
atggacgagtcgggtgaaattcgcgtgactgcgttcaaggagcagtgcgacaagttctac
gacatgatcgaagcagataaagtctattacattacaaagtgtcagctgaagccggccaac
aagcagtactcaacgttgaagaacgactacgagatgaccatgtcaaacgaaacgatcatt
caggagtgcaaggatgtggacgcgtcaatgcccggtatccagtacaactttgtgcccatt
tcgcagattaccaacatggaagcgaacgccatgatcgacgtggtcggtgtctgcaaggaa
gcgagcgagttgaacacattcacggccaaatcttccggtcgagagctgaccaaacgtgaa
gtcaccatggtggactccagcaacgctgcagtacaactgaccctctggggcgccgatgcc
caaaacttccccacctcgacgaacccggtggtcgtggtcaagggagctcgcgtgaccgaa
ttcggcggaggaaaatcgctcggtttggtcggaggcagcgtcatgaaattgaacccggac
attgacgtcgctcacaagattcgcggctggtacgacaacggaggctgcgacgccgtcatc
aacagcgtttccacccggaccggtgccgctggcggttcgtactcgaccgagtggatgacg
ttccacgagaccaaggagaagaacctgggtcacggcgacaagccggattacttccaggtg
aaggccctggtgcacaacatcaagtcgggtaacgccgtctacaaggcgtgcccacaaacc
gactgcaacaagaaagtggtcgaccaggacaacggacagtaccggtgcgaaaaatgcaac
gccgatttccccaacttcaagtaccggctgctggttaatatgctggttggcgactggacc
tcgaaccgctgggtgacggtcttcaccgagctgggcgagcagatgctaggcaagacttcg
caggaaatcggcgatgcgctcgagtacaacaaagacgaggccgaacagatcttttccaac
atcagcttcgcgagcttcatcttcaagctgcgcaccaaggtcgagttttacggcgatgcg
gcccgcaacaaaaccaccgccgtggcggccacccccgtcaaccacaaggagtacaacgcg
tacttggtcaagaacatccaggagctgaccggcatcggcaagaactaa
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integrated database retrieval system
