Culex pipiens pallens (northern house mosquito): 120426736
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Entry
120426736 CDS
T07310
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120426736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120426736
Spliceosome [BR:
cpii03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120426736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
PRP4
ANAPC4_WD40
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_SCAP
eIF2A
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_SPT8
WD_LRWD1
WD40_RFWD3
CD59
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
120426736
NCBI-ProteinID:
XP_039447447
LinkDB
All DBs
Position
1:complement(94124458..94126182)
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AA seq
506 aa
AA seq
DB search
MSDDEELVFAKRPRTIHYGSLEDSERARQMADSGGPSGSSGGDIGQIYTSSDYFDLENEV
SKDKAALLEEFERKKKARQIHVSTDDSEVKRNLRALNEPICYFGEGPAERRIRLKELLAA
LGESAIPTKSSKDDDKKQSQSQKLEQESTWYHEGPEALRIARIWLANYSLPRAKERLDAA
SEQLNLPSATKAGRMVELQKRIQSLAPMCSQVGDVRPITNCSFNHDSTLLMTSSLSSLCK
VWSVPDCNLVQTLRGHQFYVSAIAFRNGVATDSKGEVAMASGCYDGTVKLWSFDSEEAVA
DITGHVPHRVARLAFHPSGRFLGTACYDSSWRLWDLEQKQEVLHQEGHAKAVHCIAFQID
GSVCVTGGLDAFGRVWDLRTGRCIMFLEGHLSGIYGVDFSPNGYHIVTGSQDNTCKIWDL
RRRNPVYTIPAHTNLISDVKYQKNGGHFLVTSSYDNTAKIWSNKTWQPLKTLSGHDSKVM
SVDISPDSQHIATTSYDRTFKLWSPE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggagctagtgtttgcgaagcggccacgcaccatccactatggttcg
ctggaggattcggaacgggcgcgtcagatggccgattcgggtggcccatcggggagttcc
ggtggggacattggccagatttacacttccagcgattacttcgacctggagaacgaggtt
tcgaaggataaggccgcgctgctggaggagtttgagcggaagaagaaggcccgccagatt
cacgtcagtacggatgattcggaggtgaagcggaacctgcgggcgttgaacgagccgatt
tgctactttggggaggggccggcggagcggcgcattcggttgaaggagctgttggccgcg
ctcggggagagtgccattccgacgaagagttccaaggatgacgacaagaagcagtcgcag
tctcaaaagttggaacaggaatcgacgtggtaccacgagggaccggaagcgctacggatt
gcgcgtatttggttggcgaattactcgctgccgagggcgaaggagcgactggacgcggct
tccgaacagctgaatctgcccagtgccaccaaggccggccggatggtcgaactgcagaag
cggatccaatcgctggctccgatgtgcagccaggttggggacgtgcggccaatcaccaat
tgtagcttcaaccacgactctacactgctgatgacgtcctcgttgagctcgctgtgcaag
gtttggtccgttccggactgcaacctggtgcagacgcttcgcggtcatcagttctacgtg
agtgcgatcgcgttccggaacggagtcgccaccgattccaagggcgaagtcgccatggcc
tcgggctgctacgacggcaccgtcaagctgtggtcgttcgacagcgaagaagccgtcgcg
gacatcaccggacacgtgccgcatcgagtggcacggcttgcctttcacccttccggacgc
ttcctcggaacggcctgttacgactcgtcctggcgtctgtgggatctcgagcagaagcag
gaagtccttcaccaagagggtcacgccaaagccgttcactgcatcgcattccagattgac
ggcagcgtctgcgtcaccggcggcctcgacgcctttggccgtgtttgggacctccgcacc
ggtcgctgcatcatgttcctcgagggtcacctgagtggcatctacggcgtagacttctcc
cccaacggctaccacatcgtgaccggatcccaggacaacacgtgcaaaatttgggatctt
cgccggcgcaacccggtctacacgattccggcgcacacgaacctcatttccgacgtcaag
taccagaagaacggcggccacttcctggtaacttcaagttacgacaacacggcaaagatc
tggtccaacaagacgtggcagccgcttaagacgctgtccggccacgacagcaaggtgatg
agcgtggacatttcgcccgactcgcagcacatcgcgaccacctcgtacgaccggaccttc
aagctgtggagtcccgaatga
DBGET
integrated database retrieval system
