Culex pipiens pallens (northern house mosquito): 120427105
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Entry
120427105 CDS
T07310
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpii04121
]
120427105
Enzymes [BR:
cpii01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120427105
Ubiquitin system [BR:
cpii04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120427105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
Helicase_C
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
PHD_P300
Motif
Other DBs
NCBI-GeneID:
120427105
NCBI-ProteinID:
XP_039447892
LinkDB
All DBs
Position
3:8236543..8240789
Genome browser
AA seq
1277 aa
AA seq
DB search
MAGALEFCLADIGLLLPEDTDPKSKGVFRHEKRFYRLIFERGFVMHQVPALLRDVKRLPE
YSLRWRTDASDEASVFLSLFMRFLRPEELGDFGCRMQRQRMVALFFREVERRDFVRMGEL
QLREPTEDGEPLPVNEFYERLRVGHEGEVLDGSIPEDVAHGSLRPTLRPYQVRAIRWMLD
RETVPKVLPAQYARLGCLNVEGEEFYMNLDSFEVLAEVPGEIAIPPGGILADEMGMGKTV
EMLGLMLLNRNRKRKFEEEVGPGVAVAVKELKCICIRSNVKDTITCQKCGQRQHKKCVLK
NCEVEPSRYICPECWRSEVLVESSTTIIVSPVSIKMQWASEIRKHIADSSFKIFIYEGVA
ESGWISPADLAKYDVVLTDYNVLQTEIYYTAVNSRTSRHGKRFLSPVSPLPLVRWWRVCL
DEAQMVEGIHNQTTKMVKTLPAVHRWTVTGTPIEKSMDNLYGLVHFLDYSPYNDYQLWRQ
LNYQYQQGNPQPLLAVMSRIMWRTCKAAVLDQLGIPPQTEVLHKITMSDLQNFFYRTEHA
KCATAFREKAAYLGRNLSMARMTIQTLNLLMEPLRKLRQDCVIPSILHKSDQLTTKKLLT
PNELREHLVMNNEMECKSALRTIVSSINGMAAVHVIRREYEQAAKLYKSALRWADDYQGT
ISVDSLLQIHALYNLIEVLEMNGFVGEEEAFRKQLRDYEERCAKLEWKYIETYSNIVKNV
ERELAPAAGKVFEISAKLDHKVDGNWWRDVIFSLDRNSARTAAFLLKLNIEVKNHSGMAE
DIVGLRSMDYQLTTWLDEVKEQRNELVDAFDSIAYFRENLKPKHLWPAEVRGRIEALIRT
AFLCHLDPELPDLPYDERQERPTCVLCQVKRTLNLYECMIFQKHFIEETNTTEGSWQMTV
QEVIVRQIHACCRKERMEKATIEEGNLFLAYLEALKDEFKHYSKYWVEINYAAAAFDELN
MCRSRLQVITMEDLDQAGGKKSIQQILDYEVHETFEDLQVQKVTAEREFVRLKGTLKYLQ
HLGSVAEIDVCPICQCQPEERYAVLQCGHHFCIVCAPQLVRIARSQGNNVTCGVCRHKQQ
IADLYFVTCGQILPAKQDINVRGNYSNKILKIVETVLQLKLDEPDVKIIIFSHWDPILFY
LAQALDTNSVTYRLKSAKFYKHIEEFKDYTNGITCLLLPLKAGSKGLNLTEATHVFLVEP
ILNPGEELQAVGRVHRIGQTKPTFVHRFIVQNTIEETIHRTVQADRTGRWSSKDVTVEHL
EQLFQLEEPEQIELFAE
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgctcgagttctgcctggcggacattggcctgctgctaccggaggacacc
gaccccaagtcgaagggggtgttccgccacgagaagcgcttttaccggctgattttcgag
cgcggcttcgtcatgcaccaggttccggcactgctaagggatgtgaaacgccttccggag
tactcgctgcgctggcgcacggatgcctccgacgaggcgtcggtgtttctgtcgcttttc
atgcggttcctgcggccagaagagttgggtgattttggctgtcggatgcagcggcagcga
atggttgcgctgttctttcgggaggtggagcggcgcgattttgtgcggatgggcgagttg
cagctgcgcgagccgaccgaggacggggaaccgcttccggtgaacgagttttacgagcgg
ttgcgggttgggcacgagggggaggttttggacgggtcgattccggaggatgtggcgcac
gggagtttgcggccgacgttgaggccgtaccaggtgcgggcgatccggtggatgttggac
cgggagacggtgccgaaggtgctgccggcgcagtatgcgcggttggggtgtttgaatgtg
gagggggaggagttttacatgaacttggatagctttgaggtgcttgcggaggttccgggg
gagattgcgataccgccgggtgggattttggcggacgagatgggcatgggcaaaacggtt
gagatgctggggttgatgctgttgaatcggaacaggaagcgaaagtttgaggaggaagtg
ggtccgggagttgcggttgctgtaaaggagctcaaatgtatctgcatccggagtaacgtg
aaggatacgatcacttgtcaaaagtgtggccagaggcagcacaagaagtgtgtgttgaag
aactgcgaggtggaaccgagtcggtacatttgcccggagtgttggcgttcggaggtgttg
gtggaatcttccacgacaatcatcgtgtccccggtgtcgatcaagatgcagtgggcgtcg
gagatccggaagcacatcgcagactcatcgttcaagatcttcatctacgagggagtcgcc
gaaagtggttggatcagtccggcggacctcgcaaagtacgacgtggtgctgacggattac
aacgtgcttcagaccgagatttactacacggcggtcaattcgagaacgtcgcgccacggc
aagcgcttcctcagtccggtatcgccgttgccgttggtccgttggtggcgcgtttgcctg
gacgaggctcaaatggtcgaaggaattcacaaccagacgaccaaaatggtcaaaacactg
ccggcggttcaccgctggaccgtcacgggaacgcccatcgagaagagcatggacaatctg
tacgggttggtacacttcctggactactcgccgtacaacgactatcaactgtggcggcag
ctcaactaccagtaccagcagggaaatccgcagccgctgctcgccgtcatgtcccgaatc
atgtggcgaacctgcaaggcagccgtcctcgatcagctaggcattccgccgcaaacggag
gttctccacaaaatcaccatgtccgacttgcagaactttttctaccgcacggagcacgcc
aagtgcgcgacggcgttccgcgaaaaggccgcctatttgggccgaaacctcagcatggcc
cggatgacgattcagacgttaaacttgctgatggaaccgcttcgcaagctgcgtcaagat
tgcgtcatcccgtcgatcctgcacaaatccgaccaactgaccaccaagaagctcctcacg
cccaacgaactccgcgagcacctcgtaatgaacaacgaaatggagtgcaaatccgccctc
cgcacgatcgtctccagcatcaacgggatggccgccgtgcacgtgatccgacgcgagtac
gaacaggccgccaagctgtacaaatcggccctgcgctgggccgatgactaccaaggcacc
atcagcgtcgattcgctgctgcaaattcacgccctgtacaatctgatcgaagtgctggag
atgaacgggtttgtgggcgaggaagaggcgttccggaagcagctgcgcgactacgaggaa
cgctgcgccaagctcgagtggaagtacatcgagacgtactcgaacattgtgaagaacgtg
gagcgcgagttggcgccggcagcgggaaaggtcttcgagatatcggccaagctcgatcac
aaagtcgacgggaattggtggcgggatgtgatcttttcgttggatcgaaactccgctcgg
acggccgccttcctgctcaagctgaacatcgaggtgaaaaatcacagcggcatggcggag
gacattgtcgggttacggagtatggactaccagctgacgacttggttggatgaggtgaaa
gagcagcggaacgagctggtcgatgctttcgatagtattgcgtacttcagggagaacctc
aagccgaaacacctttggccggcggaagttcgtggtcgcatcgaggctctcatccgaact
gcgttcctctgtcatttggatccagaactgcccgatttgccgtacgacgagaggcaggag
cgaccgacctgcgtgctgtgccaggtcaaacgaaccctgaacttgtacgaatgcatgatt
ttccaaaagcactttatcgaagagacaaacacgaccgagggctcgtggcagatgaccgtg
caggaagtgatcgtgaggcaaattcacgcttgctgccgcaaggaacgcatggaaaaggcc
accatcgaggagggcaacctatttctagcctacctggaagccctcaaggacgagttcaag
cattactccaaatattgggtcgaaatcaactacgcggcggcggccttcgacgagctgaac
atgtgccgatcgcgcctccaggtcatcaccatggaagacctggatcaagccggcggcaaa
aagtccatccagcaaatcctcgactacgaggtgcacgaaacgttcgaggatcttcaagtg
cagaaggtcaccgctgagcgagaattcgtacgcctcaaaggaacgctcaaatatctgcag
cacttgggaagcgtcgccgagatcgatgtctgtcccatctgccagtgccaaccggaggaa
aggtacgccgtcctgcagtgtggccaccatttctgtatcgtttgcgccccgcaactcgtt
cgaatcgctcgaagtcagggcaacaacgtgacctgcggcgtctgccgccacaagcaacaa
atagccgacctctacttcgtaacgtgcggtcaaatcctccccgccaagcaggacatcaac
gtgcgcggcaactactccaacaagatcctcaaaatcgtcgaaaccgtcctgcagctcaaa
ctcgacgaacccgacgtcaaaatcatcatcttctcccactgggacccgatcctcttctac
ctggcccaagccctcgacaccaactccgtcacctaccgcctcaaatcagccaaattctac
aaacacatcgaagagttcaaagattacaccaacggcatcacctgcctcctgctccccctc
aaagccggctccaaggggctcaacctgacggaggcgacgcacgtcttcctcgtcgaaccc
atcctgaacccgggcgaggagttgcaggccgttgggcgggtacatcggatcggccagacc
aagccaaccttcgtgcatcggtttatcgtgcagaacacgatcgaggagacgatccatcga
accgttcaggccgatcggaccgggcggtggagctcgaaggacgtgacggtggagcatctg
gagcagctgtttcagctggaggagcccgagcagattgaactgtttgcggagtga
DBGET
integrated database retrieval system
