KEGG   Culex pipiens pallens (northern house mosquito): 120427158
Entry
120427158         CDS       T07310                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpii03041]
    120427158
Spliceosome [BR:cpii03041]
 Complex B
  Other components
   Complex B specific factors
    120427158
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 LisH_TPL NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_2nd RMC1_N Beta-prop_IP5PC_F LisH_WDR26 DUF7165 WD_LRWD1 zf_topless VPS8_N LisH_PAC1 KNTC1_N WD40_like
Other DBs
NCBI-GeneID: 120427158
NCBI-ProteinID: XP_039447951
LinkDB
Position
1:114530733..114532548
AA seq 509 aa
MSIEIESADVIRLIQQYLKESNLHKTLQTLQEETGVSLNTVDSVEGFVSDIHNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQQEAERYIHLENM
LQRAYFDPREAYPEGGSKEKRRAAIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAIRDQEDESFPTQLARQIKFGQKSHVECAHFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLAMSFSRDSEMLATGAQDGQIKVWKLLTGQCLR
RFEKAHSKGVTCLQFSRDNSQILTASFDHLIRLYGLKSGKMLKEFRGHTSFVNEAVFSPD
GHNVLSASSDGSVKIWSLKTTECVSTFKALGSDLAVNSVLMLPKNPEHFVVCNRSNTVVI
MNMQGQIVRSFSSGKREGGSFICATISPRGEFIYCAGEDLVLYCFSVTSGKLERTLNVHE
KDVIGLTHHPHQNLLATYSEDGLLKMWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgatagaaatcgaatctgccgacgtaatccgtctgatccagcagtacctgaaggag
tcgaacctgcacaaaacgctgcaaaccctgcaggaggagaccggcgtttcgctcaacacc
gtcgacagcgtggagggcttcgtgtcggacatccacaacggccactgggacacggtgctg
aaggcgatccagtcgctgaagctgccggacaagaagctgatcgatttgtacgagcaggtg
gtgctggagttgatcgagttgcgcgagctgggtgcggcccggtcgttgctgcgccaaacc
gatccgatgattatgctgaagcagcaggaagccgagcgttacattcatcttgagaacatg
cttcagagggcgtattttgacccgcgcgaggcttatccggagggaggaagcaaggagaag
cgacgggcggcgattgccactgcgttggcgggggaagtttcggtggttccttcgtcgagg
ttgttggccttgcttgggcaggcactcaagtggcagcagcaccagggattgttgcccccc
ggaacgacgatcgatttgttccgtggtaaagcggccattcgtgaccaggaagacgagagt
tttcccacgcagttggcgcgacagatcaagtttgggcagaaaagtcacgtcgagtgcgcg
catttctcgccggatggtcagtacctggttacgggcagcgtcgacggatttatcgaggtt
tggaatttcaccaccggtaaaatccgtaaggatttaaagtatcaggcgcaggacaacttt
atgatgatggaacaggccgtgctggcgatgtcgttttcacgtgactcggaaatgttggcc
accggagcgcaggatgggcaaatcaaagtttggaagctgcttaccggtcaatgtctacgg
cggtttgaaaaggctcacagcaagggtgtcacctgtctgcagttctctcgggacaacagt
caaattttaaccgcctcgttcgatcacctgattcgtctgtacggccttaaatccggtaaa
atgttgaaagagttccgcggtcacacgtccttcgtcaacgaagctgtcttctctccggat
ggtcacaacgtgctgagcgcatcctcggacggttccgtcaaaatctggtccctcaaaaca
accgaatgcgtgtcaacgttcaaagctctcggcagcgacctggccgtcaactcggtcctg
atgctccctaagaacccggaacactttgtagtctgcaaccggtccaacacggtcgtcatc
atgaacatgcagggccaaatcgtgcgttcgttctcgtccggtaagcgcgagggaggttcg
ttcatctgcgctacgatttcaccccgcggggagtttatctactgtgccggcgaagatctg
gtgttgtactgcttctccgttacgtccggcaagctcgagcgaacgttgaacgtgcacgaa
aaggacgtcatcgggctgacgcatcacccgcaccagaatctgctcgccacgtacagcgag
gatgggctgctgaagatgtggaagccgtaa

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