Culex pipiens pallens (northern house mosquito): 120427232
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Entry
120427232 CDS
T07310
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120427232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120427232
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120427232
mRNA degradation factors
3'-5' decay
Pan complex
120427232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
120427232
NCBI-ProteinID:
XP_052567119
LinkDB
All DBs
Position
3:77359460..77458079
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AA seq
743 aa
AA seq
DB search
MDPIFFSPPNGVPSESKLATYMSRQNVSTPTYGLSSGLSKLNLDSPISIKKSQVTPQSPE
FIPTNRLNTSSSPNFYSSYSILGSNGTTGGPVAGGVGASSVIAAAAASNGATVVVAGTGS
GAAALLGQSPSAQQLSSVATAIVPTGVGGGGGGGGGGGGGGGGIGGGSSGGAKSQASSYG
SSILGSSLSNSSTYAVTPIKGRSLLRNESPQSTNTSPRITPQPSPPPITTNIHQENVGGT
TYFYPTAANHQLTPSSTVNTTDNTFVHVASSQINLSYSHPGHVYPGPASHVINMQPKAQV
SMAYFVQDELRNDILSRNEIVNSIETECQDLPLEVENYHSLCLLESLPVHPKLPLPSSTY
KATHNLTGVKYCLRRLHGFRLQSTKCMQVVDMWKKLQHTNVVQLREVFTTKTFGDNSLVI
VYDYHPGSQTILSKFFIPAAESTNGYSDPFAGEARPFSHKSSLHRTAASALLPENEIWSI
IIQLTAGLRSIHQAGLACRTLDPTKIIITGKRIRFSCTAISDIATFDPNQPNPLSVVNHH
QQDDLTALGKLILALACRSLQSVQRDQIQNSIELISRHYSSDLRNIILYLLSNSNRRSVT
EIMPMIGARFYVQLDALQAQCDIQEDELAKEMECGRLYRLLVKLGTVNERPELNLDVTWS
ETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTLEKVQLMSRDEQSVLVV
TYAELKHCLEQAFSELVAAATSV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatattcttctctccgcctaatggagtcccgtcggaaagcaaactggcaacc
tatatgagtcgacagaacgtttcgacaccaacgtatgggttgtcctcgggcctcagcaaa
ctcaacctagactctccgatatcgattaagaaatcacaggtgaccccacagtcgccagaa
ttcattccaaccaaccgtctgaacacatcatcatcacccaacttttactcgtcgtactcg
atactcggcagcaacggcaccaccggcggaccagtggcaggtggtgtcggcgccagcagt
gtgatagcggcggcagcggccagtaatggtgccacggtggtcgttgccggaaccggttcc
ggtgccgccgccctgctcggtcagtccccgtcggcgcagcaactttcatcggtggcgacg
gcgatcgtgcccacgggcgtagggggaggtgggggcggaggaggaggaggaggcggaggc
ggaggtggaatcggtgggggcagttccggtggggccaaatcccaggccagcagctacggg
agcagtatcctgggcagttcgctcagcaacagctcaacctacgccgtgacgcccatcaag
ggtcggagtttactacgtaacgaatcaccccagagtacgaacacatctcctcgaatcacg
cctcaaccatcaccaccaccaattactaccaacattcatcaggagaatgtcggcggcacg
acgtatttctatccgaccgcagcaaaccatcaattaacaccgagtagtacagttaacacg
actgataatacatttgtccatgtagcaagctcacaaattaatctaagttattctcatcca
ggacatgtctacccgggacctgcgtcgcacgttatcaacatgcaaccgaaggcacaagta
tcgatggcgtacttcgtacaggacgaactgagaaacgatattttatctaggaacgaaata
gtcaatagtattgaaaccgagtgtcaagatttacctctagaagtggaaaactatcattcg
ttatgtctgttagaatctttgccagtccatcccaagctaccactaccgtcgtccacttac
aaagcaacacacaatctaactggcgtgaagtactgccttagacgtcttcatggtttccgt
ctccagtcgaccaaatgcatgcaggtcgtcgacatgtggaaaaagttgcaacacaccaac
gtagtacaactgcgagaagttttcaccacgaaaaccttcggtgataattccctggtgata
gtgtacgactaccaccccggttcccagacgatactctccaagttcttcatccccgcggca
gaatccacgaacggctattccgatccattcgccggagaagcgagacccttcagtcacaaa
agttccctgcaccgaactgccgccagtgctctgctgccggagaacgaaatctggtcaatt
atcatccagctgacggccggcctgcggtcgatccaccaggccggtctggcctgtcggaca
ctggacccgacgaagatcatcataactggcaagcggatacggttcagctgtacggccatt
tccgacattgccacgtttgacccgaaccaaccgaacccactttccgtggtgaaccaccac
cagcaggacgatctgacggcactgggcaagctgatcctggcgttggcctgccgaagtctc
cagtccgtgcaacgagatcagatccagaacagtattgagctgatatcgcgccactattcg
tcggacttgcggaacattatcctgtacctgctgtccaacagcaaccgccgctcggtgacg
gagattatgccgatgatcggggcccgcttctacgtgcagctcgacgccctgcaagcccaa
tgtgatatccaggaggacgagctggcgaaggagatggagtgcggccggctgtaccggctg
ctggtgaagctcggcaccgtcaacgagcgaccggagctcaacctcgacgtcacgtggtcg
gaaacgggcgaccgctacatgctgaagctgttccgcgactacctcttccacaccgtcacc
gaggacgggcgcccctggctgaaccagtcccacatcgtgcagtgtctgaacaagctggac
gcgggcacgctggaaaaggtccagctgatgtcacgtgacgaacaatcagtattagtcgta
acttatgctgaactaaagcactgtttagagcaagcattttccgaactggttgcggccgcg
accagcgtgtaa
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