Culex pipiens pallens (northern house mosquito): 120428015
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Entry
120428015 CDS
T07310
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03013
Nucleocytoplasmic transport
cpii03015
mRNA surveillance pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120428015
09122 Translation
03013 Nucleocytoplasmic transport
120428015
03015 mRNA surveillance pathway
120428015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120428015
03041 Spliceosome [BR:
cpii03041
]
120428015
03009 Ribosome biogenesis [BR:
cpii03009
]
120428015
03012 Translation factors [BR:
cpii03012
]
120428015
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120428015
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120428015
mRNA cycle factors
Stress granule specific factors
120428015
Spliceosome [BR:
cpii03041
]
Complex C
Other components
EJC/TREX
120428015
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
90S particles
Helicases
120428015
Translation factors [BR:
cpii03012
]
Eukaryotic type
Initiation factors
eIF-4
120428015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
TniB
UvrD-helicase
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
120428015
NCBI-ProteinID:
XP_039448920
LinkDB
All DBs
Position
1:121816915..121822135
Genome browser
AA seq
400 aa
AA seq
DB search
MAGRRAAANEDLSNVEFETSEDVEVLPTFNSMGLREELLRGVYAYGFEKPSAIQQRSILP
IVKGRDVIAQAQSGTGKTATFSISILQSMDTTLRETQVLCLSPTRELAVQIQKVILALGD
FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRSIKMLVLDEADE
MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI
KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM
PQKERDEIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRF
GRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagacgagctgcggcgaacgaggacctgtcaaacgtggagtttgagacaagc
gaggatgtcgaggtgctgccgacgttcaactcgatgggcctccgggaggagctgctgcgc
ggtgtttatgcttacggtttcgagaagccgtctgccatccagcagcgaagcatcctgccg
atcgtcaagggacgcgacgtgatcgcccaggcccagtccggaacgggtaagacggccact
ttctccatctcaattctgcagtcgatggacacgacgctgcgtgaaacgcaggtcctctgt
ttgtcgccgacccgtgagttggccgttcaaatccagaaggtcattctggcgctgggagat
ttcatgaacgttcagtgtcacgcctgcatcggtggaactaacctcggcgaggacattcgc
aagttggactacggccagcacgtcgtcagcggaacgccgggccgagtgtttgacatgatt
aagcgccgggtgctgcgaacgcggtccatcaagatgctggtgctggacgaagcggacgaa
atgttgaacaagggtttcaaggagcagatttacgacgtctatcggtacctcccgccggcg
acccaagtggtgcttatttcggccacgctgcctcacgagatcctcgagatgacgtccaaa
tttatgacggatccgattcggattctggtcaaacgtgacgagttgacgctcgagggcatc
aagcagttcttcgtggcggtcgagcgcgaggagtggaagtttgacacgctgtgcgacctg
tacgacacgctgaccatcacgcaggccgttatcttttgcaacacgaagcgcaaggtcgac
tggctgacggagaagatgcgcgaggcgaactttaccgttagctcgatgcacggcgacatg
ccgcagaaggagcgtgacgaaattatgaaggagttccgttcgggccagagccgggtgctg
attacgacggacgtgtgggcgcgtggcatcgacgtccagcaggtttcgctcgtcatcaac
tacgatctgccgaacaatcgtgagctgtacattcaccgcatcggtcgatcgggtcgattt
ggccgcaagggtgtggcgatcaactttgtgaagagcgacgacattagaattttgcgcgat
attgaacagtactactcgacgcagatcgatgaaatgccgatgaatgtggccgatttgatt
taa
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