Culex pipiens pallens (northern house mosquito): 120428267
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Entry
120428267 CDS
T07310
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03015
mRNA surveillance pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120428267
09123 Folding, sorting and degradation
03018 RNA degradation
120428267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120428267
03041 Spliceosome [BR:
cpii03041
]
120428267
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120428267
mRNA cycle factors
Stress granule specific factors
120428267
Spliceosome [BR:
cpii03041
]
Complex C
Other components
Complex C specific factors
120428267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RRM_5
RBD_DEAH11
RRM_RdRP1_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
120428267
NCBI-ProteinID:
XP_039449193
LinkDB
All DBs
Position
2:complement(223716932..223723325)
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AA seq
628 aa
AA seq
DB search
MASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL
DTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCK
VAQDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVFVGRFIPRKEREKELGEKAK
LFTNVYVKNFGDELTDESLKEMFEKYGTITSHRVMIKENKSRGFGFVAFENPESAEVAVQ
ELNGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDE
RLRKEFSPFGTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA
QRKEDRKAHLASQYMQRMANMRMQHMGQIFQPGGNGGYYVPTIPQPQRFFGKQVSQIRTT
PGWFRANAANQNAVAANAAGGAYPAMAAATAGNQYRQAGNVRGQQQQAPNAQAQAASAAM
RNSARPITGQQAGGNMQTRPVAPQMAANQARAANYKYTQNMRNPPAQPVAIPTQPVAQQA
VHVKGQEPLTATMLAAAQPAEQKQMLGERLFPLIEPMYPSIAGKITGMLLEIDNSELVHM
LEHSESLKAKVDEAVAVLHAHQQKTQPQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctttacgtcggcgatttacacgccgacatcaccgaggctatgctgttcgag
aaattctcgtccgctggcccggttctgtcgatccgagtgtgccgcgacgtggtcacccgt
cgttcccttggttatgcctacgtcaacttccagcagccagcagacgctgagcgtgccctg
gacacgatgaactttgatctgatcaaggggcgcccgatccgcatcatgtggtcccagcgc
gacccgtcgctgcgcaagtccggcgtcggcaacgtcttcatcaagaacctggacaagaac
attgacaacaaggccatgtacgatacgttctccgcgttcggcaacattctcagctgcaag
gtggcccaggatgagaagggcaactcgaagggatacggattcgtgcactttgaaacggag
gaatcggccaacacgtcgatcgagaaggtcaacggtatgttgctcaacgccaagaaggtc
ttcgtgggccgtttcatcccgcgcaaggagcgcgagaaggagctcggcgagaaggctaag
ctgttcacgaacgtgtacgtgaagaactttggcgacgagctgaccgacgagtcgctcaag
gagatgttcgagaagtacggcaccatcaccagccaccgtgtgatgatcaaggaaaacaag
agccgtggattcggattcgtcgcgttcgaaaacccagaatcggccgaagtggccgtccag
gaattgaacggcaaggagcttggcgatggcaaagtcctgtacgtgggccgtgctcagaag
aagaacgaacgccagatggaactcaagcgccgcttcgaacagctcaagatggagcgtttg
acccggtaccagggagtcaacctgtacgtcaagaacttggacgattccatcgacgatgaa
cgtctgcgcaaggagttctctccgttcggaaccatcacatcggccaaggtcatgctggag
gaaggtcgttccaagggattcggcttcgtttgcttctcggctgccgaagaggccaccaag
gccgtcaccgagatgaacggtcgcatcgttggcagcaagccgctgtacgtggccctggcc
cagcgcaaggaagaccgcaaggctcatctggcctcgcagtacatgcagcgtatggccaac
atgcgcatgcagcacatgggacaaatcttccagcccggtggcaacggaggctactacgtt
ccgaccatcccccagccgcagcgcttcttcggcaagcaggtcagccagattcgtaccact
cctggatggttccgtgccaacgctgccaaccagaatgccgttgctgcaaacgctgccggt
ggtgcttacccggccatggccgctgccaccgccggcaaccagtatcgccaagccggaaac
gtccgcggccaacaacaacaggcccccaacgctcaagcccaggccgcttccgctgccatg
cgtaactcggcccgtcccatcaccggccaacaggcaggtggcaacatgcagacccgcccg
gtcgccccgcaaatggccgctaaccaggcccgtgctgctaactacaagtacacgcagaac
atgcgcaacccgccggctcagcccgttgccatcccgactcagcccgttgctcaacaggct
gtccacgttaaaggacaagaaccgcttacggccaccatgttggccgccgcacagccggcc
gagcagaagcagatgctgggcgagcgtttgttcccgctgattgagccgatgtacccgtcg
atcgcaggtaaaatcaccggaatgttgctcgagattgacaactccgagctcgtgcacatg
ttggagcacagcgagtcgctcaaggccaaggtcgatgaggccgttgccgtgctgcacgct
caccagcaaaagactcagccccagtaa
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integrated database retrieval system
