Culex pipiens pallens (northern house mosquito): 120428741
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Entry
120428741 CDS
T07310
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpii04990
]
120428741
Domain-containing proteins not elsewhere classified [BR:
cpii04990
]
Other domain-containing proteins
Tubby family proteins
120428741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
SOCS_box
WD40_Prp19
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_ELP1_1st
DUF3527
Motif
Other DBs
NCBI-GeneID:
120428741
NCBI-ProteinID:
XP_039449751
LinkDB
All DBs
Position
1:95737347..95827434
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AA seq
1537 aa
AA seq
DB search
MHLHFEKSTNTRCDCSILSLSWMGKVPDDIPEEEGWKLNRTNYYQEGWLATGNVRGIVGV
TFTTSHCKKNVEYPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWS
VELINDRNTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLDATITCGIWTP
DDQQVYFGTTQGQIIVMDVHGAMVSQVQLCSDVGITAMAWSCEKFKMEEGEDTEPGVTNA
SKRSFVLAVSFQNGYIYLLKSFDDVSPCHIQTGMNGSLGLVMEWSNSRELLAVAGSELLP
ASQMSDANGVPVYNNLLKFYTESGNLLYSAKIPCTTTPVSALTWGHNDKRIFIATGTQVH
IAWVSRRVASLQLLCRLQVQSSLTSEAMLPRLPLPGRIKALIGNLFAQTIRCCVPDLKSL
REFVSRPPICSTRLHCTMIRHDEDANQSSGTCYTLYLEFLGGLVPLLKGKRTSKIRPEFV
IFDPQIDEVSSYCTYSSDSTTTTTKSSSASSHSTTGTNGRSDSSESDLEEGCRSPRLSRK
RKARTKKRHPSSSDRSPNQNSDTAENNEELAYLDTLPEHVKLVEVTSNIWGTKFKIHGLA
KTLPANLGQVTYKTSLLHLQPRQMTLVITELRDDFPTGPDPNFNPNIFSEDEEEHNQPQT
STNNRKLTESAPPIAPMSPRPNRFPSRPRRQTPSSLASGSSSRPTLPQLGPLARAESYED
DTDGPEVGEPSRTVTTAPRQGLSYSSLVSQCSRPSSASSSQSRVAISPLYCEGSVPTLQS
PKNAVAPSDIIFDRPPAAGQTTLMSYSSNTDYVNNVVQVKNALMSSDHNRVNNQSHVNPV
PLNLNLNLERIEAKASTSRDTSHSGASSSRQGTPKKQNLKYIDEETPSTSATPVVLETSG
TASNNSTGATMKRTPTVISMTPAVASGIPESITRSCSVGYLDNMEIVPSDAVLSMMRKET
PYKRLVLVDKKRQKKYKRNFDDLKRTKLRQGCKSKSLDSCDILQDSPNLNKDLINLFRQM
PKVSELSENENDYSSSDQLERMRPSTSSATAGPSTSTANSKRRPSMKFPGIGGCSNQPIS
KTPILNRKEKPKCCSICKLISPTVNSTEAVCVKCRKNGGQNGVDKENNSIDDLIYVDIVC
AKPPQVPPKSKRSILEQYISSAFSNHGDLVLKDTGSTSSPGCSKSLFDRKNNNSAESNGT
CSTPKSKARKNFEIVTSFTDSPLFSRRHRSMNRSDSSKLQSENSTPVMARKENGESRKSR
KKDESPRRHRRNDSCPGTSLENNNLEEPPLQPVEITPVEQKASVSLHTQALTTLENIISR
LRDLDEGRLTPPSSPSNSRLPRSSPASPAPSKKSKRHQSASPIRHILNSPLLNRRQRKQK
QHTESSDDENQLLNQSDESSGGGGGGVGGSNGTSGSNKQYRDLETFQKAQLRQKLKRGKI
EPNGVTSSSQPQAPVRREFVMHNKAPMWNENSQVYQLDFGGRVTQESAKNFQIEFRGKQV
MQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRLK
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcacttcgagaagagtaccaacaccaggtgcgactgctcgatcctgtcgctg
tcctggatgggcaaggtgccggatgatattccagaggaggaaggctggaagttgaaccgg
accaactactaccaggaaggctggctggcgaccggaaacgtgcgggggattgtcggggtc
accttcacgacatcacactgtaagaagaacgtcgagtacccgctccggacgaactacaac
ctgcgcgggcatcggtccgatgtcattctggtaaaatggaacgaaccgtaccagaagctc
gccagctgtgacagctccggtatcatcttcgtgtggatcaagtacgaaggccggtggagc
gtggagctgatcaacgatcgcaacaccccggtgacacatttctcgtggtcacacgacggc
cggatggcgctgatatgctaccaggatgggtttgtgctggtgggatcggttgccggccag
cggtactggtcgtcgatgctgaacctggacgcgacaatcacgtgcgggatctggacgcca
gacgatcagcaggtgtacttcgggacgacccagggccagatcatcgtgatggacgtgcac
ggtgcgatggtttcgcaggttcagctgtgctccgacgtgggcatcacagcgatggcctgg
tcctgcgaaaagttcaagatggaggagggcgaggatacagagccgggcgttaccaatgct
tctaaacgatcgtttgtgctagcagtcagcttccaaaacgggtacatctatttgttgaag
tcgttcgacgatgtatcgccttgtcacatacaaaccggtatgaacggatcgcttgggctg
gttatggagtggagtaactctcgggagctgctggccgtagctggcagtgaactgttgccc
gcatcccaaatgtctgatgccaacggtgttccagtgtacaacaatctgctgaagttctac
accgaatcgggaaaccttttgtactctgcaaagattccttgcactacgactcccgtatcg
gcgctaacctggggtcacaacgacaagcgcatcttcattgccaccggcacgcaggtgcac
attgcgtgggtctcgcgccgggtggcgtctctccagctgctctgccggctccaggtgcag
tcctcgctgacgtcggaagcgatgctcccgcggttgccccttccaggccggatcaaagcg
ctgattgggaacctctttgctcaaaccattaggtgctgtgttcctgacttaaagtcgttg
cgggagtttgtgtcccgaccgccgatctgttcaacgcgactgcactgcaccatgatccgg
cacgacgaggacgccaaccagagctcgggcacctgttacacgctctacctggagtttctc
ggtggactcgtgccgcttctgaaggggaaacgcacctcgaagattcgaccggagtttgtg
atattcgacccgcagattgatgaagtctcttcatactgtacatattcgtccgattctacc
accaccacaaccaaaagttcatcggcgtccagccactcgactaccggaaccaacggtcga
tccgatagctcggaaagtgacctggaggagggttgtcgatcgccacgtttatcccgaaag
cggaaagcacgaaccaaaaagcggcaccccagcagtagcgatcgctcgcccaaccagaac
tcggacacggcggagaacaacgaggagctggcctatctggacacactgccggagcacgtc
aaactcgtggaagtgacgtccaacatctggggcaccaagttcaagatccacggcctcgcc
aagactctacccgcgaatctcggtcaggtaacgtacaaaacctccctgctgcatctgcaa
ccgcgtcaaatgacgcttgtcattaccgagttacgggacgacttccctaccggacccgat
ccgaacttcaatccgaacatattctccgaagacgaggaggaacacaatcagccgcaaacc
tccacgaataatcggaagctaaccgaatctgctccaccaatcgctcccatgtcaccaaga
cccaatcggtttccctcgcgtcctcgccgccaaacgccttcttcgctcgcttccgggtct
agctcgagacccacgttgcctcagcttggtccgttagcacgggccgagtcttacgaggat
gataccgacggaccggaggtcggtgaaccgtcgcgaaccgtaaccacagcgcctcgtcag
ggcctcagctactctagcctagttagtcaatgcagtagaccgtcatccgcgtccagtagc
caatcccgtgttgccatctctccgctgtactgtgaaggatccgttccgacgctgcagtca
ccgaaaaacgccgtcgcacctagtgatataattttcgatcgacctccagccgccggccag
acgacactgatgagctattcgagcaataccgactacgtgaacaacgtggtccaggtgaag
aacgctctgatgtcgtctgaccacaaccgggtcaacaatcagtcgcacgttaatccggtt
ccacttaatcttaacctcaatctcgaacggatagaagctaaagcgagcaccagtcgcgat
acgagtcattccggtgcctcgagcagtagacagggaacccccaaaaagcaaaacctcaaa
tacatcgacgaagaaactccatcgacctctgccacgcccgtagtgctcgaaacgagtggg
acagcaagcaataacagtaccggtgccactatgaaacgcactcctacggtgatctccatg
acccccgccgttgcgagcggaatccccgaatcgataacgcgcagctgtagcgttggctat
ctggacaacatggaaatcgttcccagtgatgccgttctgtcaatgatgcgaaaagaaacg
ccctacaaacggcttgtgttggtagataagaagcgacagaagaaatacaaacgaaacttt
gacgacctgaagcgtaccaagctgcgtcaaggttgcaagtcgaaaagtttagactcttgc
gatatcctgcaagattcgccgaatctaaacaaagatctgataaacctgttccggcaaatg
cccaaggtaagtgagctgtcggagaacgagaacgactactcgtcttccgatcagctcgag
cgaatgcgtccatcgacgtcttctgccaccgccggtccatcaacctcaacggcaaactcc
aaacgtagaccctcgatgaagttcccgggaatcggcggttgctcgaatcaaccgatttcc
aaaacgcctatcctgaacaggaaagagaaacccaagtgttgctcgatctgcaaactgatt
tcacccacggtcaactcgaccgaagcggtttgcgtcaagtgtcgcaagaatggtgggcag
aacggggtagacaaggagaacaatagcatcgatgatcttatttacgtggacatcgtttgc
gcaaagccgccgcaagttccgccaaagtccaagcgatccatcctggagcaatacatcagt
tcggccttcagtaaccacggagacctggtactgaaagacaccggcagtaccagcagtccc
ggctgtagtaaaagcttgttcgacagaaagaacaataacagcgctgaaagcaatggaact
tgcagtacgccaaagtcaaaggcgcggaagaattttgaaatcgtaaccagcttcaccgac
agtccactgttcagcagacggcatcggtcgatgaacagaagcgattcgtcaaagcttcaa
agcgaaaacagcacccctgtgatggctcgcaaggagaacggcgaaagccggaagagccgc
aagaaggacgaatcaccgcgcagacatcgccgcaacgacagctgtccgggaacgagtctc
gagaacaacaacctggaagaacctcccctgcaaccggtggagatcaccccggttgagcag
aaggcttccgtttcgctgcacacccaagcgctgaccacgctggagaacatcatcagtcgg
ctgcgcgacctggacgagggtcgactaacgccgccgtcatctccgtccaactcacgactg
ccacgaagctccccagcatcgccagctcccagcaaaaagagtaaacgccaccaaagtgca
tccccgatacggcacatcctgaactcgccactgctaaaccgtcgccagcggaaacagaag
caacacacggaaagttccgacgacgagaatcagctgctgaaccagtcggacgagagcagt
ggcggcggcggaggtggtgttggtggcagtaacggaaccagcggaagtaacaagcagtac
cgcgatctggaaacgttccagaaggcgcagctgaggcagaagcttaaacgagggaagatt
gaaccgaacggagtgaccagttcgtcacagccacaggcgccggtgcggcgcgagtttgtc
atgcacaacaaggcgccaatgtggaacgaaaatagccaggtctaccagctcgattttggt
ggtcgcgttacgcaagagtcggccaagaacttccagattgagttccgcgggaaacaggtg
atgcaatttggccgcatcgacggcaacgcgtacacgctcgactttcagtatccgttttcg
gcgttgcaggcgtttgcggtggcgttagcgaacgttacgcagcggctgaagtga
DBGET
integrated database retrieval system
