Culex pipiens pallens (northern house mosquito): 120429941
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Entry
120429941 CDS
T07310
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120429941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120429941
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120429941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
120429941
NCBI-ProteinID:
XP_039450973
LinkDB
All DBs
Position
1:complement(6887684..6890116)
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AA seq
723 aa
AA seq
DB search
MAQFKDQLKFDIEWGHERLVRAQQTVEVRPYDVESWSVLIREGQSRNINEVRSLYESLVS
VFPTTARYWKIYIEQEMKYRNYERVEKLFQRCLVKILNIDLWKLYLTYVKETKAGLSTHK
EKLAQAYDFALEKIGMDLHSYTIWQDYISFLKSVEAIGSYAENQKITAVRKVYQRAVITP
IIGIEHLWKEYIMFEQNINPIISEKMSLERSRDYMNARRVAKELEIVTKGLNRNLPAVPP
TATKEELKQVELWKKYVNFERSNPLRSEDTALVTRRVMFATEQCLLVMTHHPAVWHQAAQ
YLDQSSKQLIDKGDLNAAKVFADEAANILERAINSVLSRNALLYFAYADFEEGRLKYDKV
HQMYNKYLSISDIDPTLAYIQYMKFARRAEGIISARAIFKKAREDIRSTYHVFVAAALME
YYCTKDKDIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLTPQ
LSVEVWNRFLEFESNIGDLSSIVKVERRRSAVLEKLKEFEGKETAQLVDRYKFLNLYPCS
SAELKSIGYTETDGILNPLSNKLPAATPADAPEQPHQLPRPDFAQMIPYKPKPNAYPGEH
PLDGGCFPQPPALAALCSILPPPICFHGPFVSIDKLADVFSRIMLPDIPLTPHSGGGDNG
IKLFDLAKAVHWIVDDSTYSGEGGLKRRRMAPGGDDSDEEGAIAAAPPVNDVYRARQQKR
FNR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtttaaggaccagctcaagttcgacatcgagtggggccacgagcggctggtg
cgcgcccagcagaccgtggaggtgcgcccgtacgacgtggaatcgtggtcggtgctgatc
cgggagggccaaagccggaacattaacgaggtgcggtcgctgtacgagtcgctggtgagt
gtgttcccgacgactgcacggtactggaagatttacatcgagcaggagatgaagtatcgg
aattacgagcgggtggagaagctgttccagcggtgcttggtgaagattttgaacattgac
ctgtggaagctttacttgacgtacgtgaaggagacgaaggccgggttgagcacgcacaag
gagaagctggcccaggcgtacgactttgcgctggagaagatcggcatggatctgcactcg
tacacgatttggcaggattacatttcgtttttgaagagtgtggaggcgatcgggagttat
gcggagaaccagaagattacggcggtgcggaaggtgtaccagcgggcggtcattacgccg
atcattgggatcgaacacttgtggaaggagtacatcatgtttgagcagaacattaatccg
ataatttcggagaagatgagtctggagcggtcgagggattacatgaatgcacggcgggtc
gcgaaggagctggagattgtgacgaaggggcttaataggaatttgccggcggttccgccg
acggcgacgaaggaggagctgaagcaggtcgaactgtggaagaagtatgtgaactttgag
cgatcgaacccgttgaggagtgaggacacggcgttggtcacgcggcgcgtcatgtttgcc
acggaacagtgtctgctggtgatgacgcatcatccggccgtgtggcaccaggcggcacag
tatttggaccagagctcgaagcagctgatcgacaagggcgacttgaacgcggccaaggtg
tttgccgatgaggctgcgaacattctggagcgggcaatcaacagcgtcctcagccggaac
gcactgctgtactttgcgtacgcagacttcgaggaaggtcgcctgaagtacgacaaggtg
caccagatgtacaacaagtatttgtccatttcggacattgacccaacgctggcctacatt
cagtacatgaagtttgctcggcgcgccgaaggaatcatctcggcgagagccatcttcaag
aaggctcgcgaggacatccggtcaacgtaccacgtctttgtggccgctgccctgatggag
tattactgcacgaaggacaaagacatcgcgttccggatcttcgagcttggcctcaagcga
ttcggcggcagtcccgagtacgtcatgtgctacatcgactatctgtcccacctgaacgag
gacaacaacacccgggtcctgttcgagcgcgtcctctcgtccggtggcctcacaccgcaa
ctctccgtcgaagtgtggaaccgcttcctcgagttcgaatccaacatcggtgacctgtcc
agtatcgtcaaggtcgaacgacgtcgctcggccgtcctcgaaaagctgaaagaattcgag
ggcaaagaaacggcccaactcgtcgaccggtacaaattcctcaacctgtacccgtgctcc
tcggccgagctcaaatccatcggttacaccgaaaccgacggcatcctcaaccctctctcc
aacaaactcccagccgcaaccccagcagacgcccccgaacaaccccaccagctcccacgc
cccgatttcgcccaaatgatcccgtacaagcccaaacccaacgcctaccccggcgagcac
ccactcgacggcggctgcttcccgcaacccccggccctggccgccctctgctcgatcctc
ccaccgcccatctgcttccacggcccgttcgtctcgatcgacaagctcgccgacgtcttc
agccggatcatgctgccggacatccccctgacgccgcactccggcggtggcgacaacggc
atcaagctgttcgacctggccaaggccgtccactggatcgtggacgatagcacctactcg
ggcgagggtggcctcaagcggcgccgaatggcccccggcggagacgacagcgacgaggag
ggtgctatcgcggcggcaccacccgtcaacgacgtgtaccgggcgcggcagcagaagaga
ttcaaccgataa
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