Culex pipiens pallens (northern house mosquito): 120430108
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Entry
120430108 CDS
T07310
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120430108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120430108
Spliceosome [BR:
cpii03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120430108
Complex C
U5 SnRNP specific factors
120430108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
HAT_Syf1_CNRKL1_C
TPR_8
Iml2-TPR_39
FAT
Motif
Other DBs
NCBI-GeneID:
120430108
NCBI-ProteinID:
XP_039451127
LinkDB
All DBs
Position
1:complement(81797584..81800596)
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AA seq
971 aa
AA seq
DB search
RDCRSFVLLRVSQTFSTVFHGFSTQSLVIFLRPQCSTKVKMAHIPATSLGSKNKKHFLGV
PAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPAAKRKKKDEDEDDDEDLNDS
NYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKEYREKRLKEDLERYRQERP
KIQQQFSDLKRNLIAVSEDEWANLPEVGDSRNKKQRNPRAEKFTPLPDSVLSRNLGGEST
TAIDGRSGLASMIPGVATPGMLTPSGDMDLRKIGQARNTLMNVKLSQVSDSVAGQTVVDP
KGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARN
LIMRGCEVNPLSEDLWLEAARLQPPDTAKGVIAQAARHIPTSVRIWIKAADLETEAKAKR
RVFRKALEHIPNSVRLWKAAVEIENPEDAKILLSRAVECCNTSVELWLALARLETYENAR
KVLNKARENIPTDRQIWTTAAKLEEANGNNHMVEKIIDRAMTSLSANGVEINRDQWLQEA
MEAEKAGAIKCCQAIVKAVISAGIDEEDRKQTWIDDADNCAKEGAFECARAVYTFALAEF
PSKKSIWLRAAYFEKNHGTRESLEAILQKAVAHCPKSEVLWLMGAKSKWMAGDVPAARGI
LSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALDN
LEAALSLLEDAVKVFPDFAKLWMMKGQIEEQKKLLDRAVETYNGGLKKCPNSIPLWLLLS
SLEERQNLLTKSRSVLERGRLKNPKNATLWLAAIRIEIRAGLKDMANTLMARALQECPNA
GELWAEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVSKLFWSERKIQKCRDWFNRTIKI
DPDFGDSWAYYYKFELQHGTEQQQKELLERCVVAEPKHGEEWCRVSKDIANWCLKTDEVL
RAVVKVLPTPI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
cgcgattgccgttcgtttgttttgctgcgcgtttctcaaacgttttccacggtttttcac
ggtttttccacgcaaagtttggtgattttcctgcggccgcagtgttccactaaagtgaaa
atggcccacatcccggcgacgtcgctgggcagcaaaaacaagaagcacttcctgggcgtg
ccggctccgctggggtacgtggccggtgttggtcgtggtgcgacgggattcacgacccgg
tcggatatcggtccggcgcgtgacgcgaatgatgtctcggacgatcggcatgctccgcct
gcggcgaagcgcaagaagaaggatgaggacgaggacgacgacgaggatttgaacgattcg
aattacgacgagttttccgggtacagcgggtcgttgttttcgaaggatccctacgataag
gacgatgcggaggcggacgcgatttacgagagtattgataagcggatggacgagaagcgg
aaggagtaccgggagaagcggttgaaggaggacttggagcggtaccggcaggagcgtccg
aagattcagcagcagtttagcgatttgaagcggaacttgattgcggtgagcgaggatgag
tgggcgaatttgccggaggtgggggatagcaggaataagaagcagcggaacccgagggcg
gagaagtttacgccgctgccggacagtgtgctgtcgaggaatttgggcggggagagtacg
acggcgattgatgggcggtcggggttggcgtcgatgattccgggggtggccacgccgggg
atgttgacgccgagtggggatatggacttgcggaagattggccaggcgaggaacacactg
atgaatgtgaagttgtcgcaggtgtcggattcggtggctggacagaccgtagtcgatccg
aagggatatttgacggatttgcagagcatgattccgacttatggtggggacattaatgac
attaagaaggcacggctgctgttgaagagtgtccgcgagaccaatccgaaccatccgccg
gcttggattgcctcggcgcggttggaggaggtcactgggaaggtgcagatggctcgtaac
ttgatcatgcgcggttgcgaggtgaatccgttgagcgaggatctttggctggaggcggct
cggctgcagccgccggacacggccaagggtgtgattgcccaggcggcgagacacatcccg
acgtcggtgaggatttggatcaaggccgctgatttggagactgaggcgaaggccaagagg
cgcgtgtttcgcaaggcgttggagcacattccgaactcggtgcggctgtggaaggccgcg
gtggagattgagaacccggaggacgctaaaattttgctctctcgagcggttgagtgttgc
aacaccagcgtggagttgtggctggcgttggcccggttggaaacgtacgaaaatgctcgt
aaggtgttgaataaggcgcgcgagaacatcccaacggatcgacagatttggacgacggcc
gcgaagttggaggaggcgaacgggaacaaccacatggtggagaagatcatcgatcgtgcg
atgacctcgctgagtgccaacggcgttgaaatcaaccgcgatcagtggctgcaggaagcg
atggaggcggaaaaggctggcgcgatcaagtgctgccaggcgattgtgaaggccgtgatc
agcgctgggatcgacgaggaggatcgcaagcagacgtggatcgacgacgccgacaactgc
gcaaaggaaggagctttcgagtgcgctcgagccgtttacaccttcgctttggcggagttt
ccctcgaagaagagcatctggctgcgggcagcttacttcgagaagaaccatggaacgcgt
gaaagtctggaggcgattctgcagaaagccgttgcgcactgtcccaagtcggaggtgctt
tggctgatgggcgccaagtccaagtggatggctggggacgtccccgcggcacgtggcatt
ctctcgctcgctttccaggccaatcccaactcggaggacatttggttggccgccgtcaag
ctcgagtcggaaaactccgaatacgaacgcgcccgccgtcttctggccaaggcccgcgcc
tccgctccaactccgcgcgtcatgatgaagtccgccaagctggagtgggccctcgacaat
ctcgaggccgctctcagcctgctggaagacgccgtcaaagtattccccgactttgccaaa
ctctggatgatgaagggccagatcgaagagcagaaaaagctgctcgaccgcgccgtcgaa
acctacaacggcggcctaaaaaaatgtcccaactcaatcccgctctggctacttctctca
tccctcgaagaacgccagaatctgctcaccaaatcccgctccgtcctggaacgaggccgt
ctcaaaaaccccaaaaacgccaccctctggctggcggcgatccgcatcgaaatccgcgcc
ggcctcaaggacatggccaacacgctgatggcgcgcgctctccaggaatgtcccaacgcc
ggcgaactgtgggccgaggccatcttcctcgaggcacgcccccagcgcaaaaccaagtcc
gtcgacgcgctcaaaaagtgcgaacacgacccgcacgtcctgctggccgtctccaagctg
ttctggagcgagcgcaagattcaaaagtgtcgcgactggttcaaccgcaccatcaaaatc
gacccggactttggcgactcgtgggcgtactactacaagtttgagctgcagcacggcacc
gagcagcagcagaaggagctgctggagcggtgcgtggtggcggagccgaagcacggcgag
gagtggtgccgcgtaagcaaggacattgccaactggtgcctcaagacggacgaggtgctg
cgggcggtggtgaaggtgctgccgacgccgatttaa
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