Culex pipiens pallens (northern house mosquito): 120430855
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Entry
120430855 CDS
T07310
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120430855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120430855
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120430855
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120430855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
HTH_5
Motif
Other DBs
NCBI-GeneID:
120430855
NCBI-ProteinID:
XP_039451913
LinkDB
All DBs
Position
2:complement(86448785..86460805)
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AA seq
844 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKVRIQKEKYEADLKKEIKKL
QRLRDQIKSWIASGEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMD
PAQREKEEISAWLATSISSLQIQIDQFECEIESLIAGKKKKLDKDKQEKMDELKGKLERH
KFHVTKLETLLRMLDNESVDVDQIKKIKEDVEYYIDSSQEPDFEENEYIYDDIIGLDEVE
ISGIGASAGTESNNSNETAGSPSSLISGNSPPPSPVMNCSAASTAMHNHSGGDLSAGLVS
SIGGVALLDADKRPKDVKITPIKPTAIRATSGSKMDLSLTTAAIVGGTAVSLGAGTNNAN
ASSNNNTSIGGKPGLISSTPSKLHTNAAAIVAGAGVIVPNSSGIVAPQQPPGVIVQPLIG
PAFAAVAKQHPKNGSLHQSSVSGSSTTSSTASSASQPPSGAAAVAPNASGATVSNLSQIV
NASQPTLSQQLQQQQAQQQQTSLASSLLTNAAAVVAGSTPTSQQQVASGPNSIPLPHGGA
LSSASAGIENNHVMTSSAASSTINNCVSPSNSAVSSRASPSLMSPPQQQQQLLNGPAILG
KNAVPHLHIADTHPMSTLKTIAQEVINRTGGGLEAGQSPATGALLQQQPSQAGGQQQQPP
TAQQQPQPQPDTRQPGAGQQQQQPQAPQQQQQQPPPFSLVDPATAAAAAANSANSLIPTS
SSTAISNGPNAININTSTSIVANPAANNNPNVLSSAGVVPGMKTAGTNEAHIPPLLGVAP
LGPSPLQKEHQIQFQMMEAAYYHLPTPSDSERLRTYLQRQPVPTPQHYPQVSWIKQYSIS
QTQT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcgaaagttgcaaggtgaaatcgatcggtgtctgaagaaggtcactgag
ggtgtggaaacgttcgaggacatttggcaaaaggtgcacaatgccacgaacagtaaccaa
aaggtacgtatacaaaaggaaaagtatgaagccgatctcaagaaggaaatcaaaaagctg
cagcggctacgcgaccagatcaagtcatggatcgcgtccggcgagatcaaggacaagagc
gcgctgctggagaatcgacgcctcatagagacccaaatggaacgcttcaaggtagtcgag
cgggagacgaaaacgaaagcgtactccaaggagggtttgggggcggcccagaagatggac
ccggcgcagcgggagaaggaagagattagcgcgtggttggcgacctcgatcagctcgctg
cagatccagatcgaccagtttgagtgcgagatcgagtcgctgatagcgggcaagaagaag
aagctggataaggacaagcaggagaagatggacgagctgaaggggaagctggagaggcac
aagttccacgtgacgaagctggagacgttgctgcggatgctggacaacgagagcgtcgac
gtggaccagatcaagaagatcaaggaggacgtcgagtactacatcgattcgtcgcaggag
cccgactttgaggagaacgagtacatctacgacgatatcatcgggctggatgaggttgag
atttccggtattggagcgtccgccggtacggaaagcaacaatagcaacgaaacggcagga
tctccgagcagcttaatctccggcaacagtccgcccccgtcgcccgtcatgaactgcagt
gcggcgtcgacggcgatgcacaaccacagcggcggggacctgtccgccggtttggtgagt
agtataggcggcgttgcgctactcgacgccgacaagcggcccaaggatgtcaagattacg
ccaataaaaccgacggcgatccgggcaacgagcggcagcaagatggacctcagcttaacg
acggcagcgatcgtcggcggcacggcggtgagtctcggtgcgggcaccaacaatgccaat
gccagcagcaacaacaatacgtccatcggtggcaagccgggcctgatcagctcgacgccc
agcaagctccacacgaacgcggcagcgatcgtggcaggagcgggcgtgatcgtacccaac
agtagcggtatcgtggcaccccagcagccgcccggtgtcatcgtccagccccttatcggt
ccggcgttcgcggccgtcgcgaagcagcatcctaaaaacggttccctgcaccagtccagc
gtgtccggctcgtcgacgacgtcctcgacggcgtccagtgctagccagccgccgtcgggt
gccgccgccgtggcaccgaacgcgtccggcgccaccgtcagcaacctcagtcagattgtg
aacgcatctcaacctacgcttagccagcagttgcagcagcagcaagcgcaacagcagcag
acctctctcgcgtccagtttgttgacgaacgcggccgccgtggtagccggttcgacacca
acgtcgcagcagcaagtcgcgagcggccccaattccatacctctgccacacggaggcgct
ctctcgtcagcgtcggccggaatcgaaaacaaccacgtcatgacgagctcggccgcgtcc
tccacgatcaacaactgcgtttcgcccagcaactcggcggtcagcagcagagcgtcgcca
agcttaatgtccccgccacaacagcagcagcagctgctgaacggtccagcaatactcggt
aagaatgccgtaccccatctgcatatcgcagacactcacccgatgtctacattgaaaacc
atagcccaggaagtgataaaccgaaccggtggtggtttggaagctggtcaatcgccagcg
accggcgcactgctccagcaacagccctcgcaagccggcggccagcagcagcaacctccg
acggcacagcaacagccacagccccaaccagatacgagacaaccgggcgctggtcaacag
caacagcaaccacaagccccccaacagcagcagcagcaacctccgccgttctccctcgtg
gaccctgcgacggcggcggcggcggccgccaacagtgcaaactctctgataccaacgtcg
tcatctactgccatcagcaacgggccgaacgcgatcaatatcaacaccagcactagtatt
gtggcgaacccggcggccaacaacaacccgaacgtgctgtcgagcgccggcgttgtcccc
ggcatgaagacggccggcacgaacgaagcgcacataccgcccctgctgggcgtggcaccg
ctcgggccgtcgccactgcagaaggaacaccagatacaattccaaatgatggaagccgcg
tattaccacttgccaacgccaagtgactcggaacggttacggacgtacctgcagcggcag
cccgtaccgacgccacagcattatccacaggtgagttggatcaagcaatactccatttcc
caaacacagacgtga
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